RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SBNO1A3KN83 1393 aa17.83■□□□□ 0.45
COPS7B-221ENST00000488111 GCP02774 474 aa17.83■□□□□ 0.44
COPS7B-221ENST00000488111 AMPHP49418 695 aa17.83■□□□□ 0.44
COPS7B-221ENST00000488111 CABLES1Q8TDN4 633 aa17.83■□□□□ 0.44
COPS7B-221ENST00000488111 SPATA31A3Q5VYP0 1347 aa17.83■□□□□ 0.44
COPS7B-221ENST00000488111 MARF1Q9Y4F3 1742 aaKnown RBP17.82■□□□□ 0.44
COPS7B-221ENST00000488111 SOS2Q07890 1332 aaPredicted RBP17.82■□□□□ 0.44
COPS7B-221ENST00000488111 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
COPS7B-221ENST00000488111 LAS1LQ9Y4W2 734 aaKnown RBP17.82■□□□□ 0.44
COPS7B-221ENST00000488111 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
COPS7B-221ENST00000488111 IL13P35225 146 aa17.81■□□□□ 0.44
COPS7B-221ENST00000488111 KCNH5Q8NCM2 988 aa17.81■□□□□ 0.44
COPS7B-221ENST00000488111 INSRP06213 1382 aa17.81■□□□□ 0.44
COPS7B-221ENST00000488111 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
COPS7B-221ENST00000488111 PDE4AP27815 886 aa17.8■□□□□ 0.44
COPS7B-221ENST00000488111 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
COPS7B-221ENST00000488111 CDK12Q9NYV4 1490 aaPredicted RBP17.8■□□□□ 0.44
COPS7B-221ENST00000488111 MS4A1P11836 297 aa17.8■□□□□ 0.44
COPS7B-221ENST00000488111 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
COPS7B-221ENST00000488111 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
COPS7B-221ENST00000488111 BACH2Q9BYV9 841 aa17.79■□□□□ 0.44
COPS7B-221ENST00000488111 USP19O94966 1318 aa17.79■□□□□ 0.44
COPS7B-221ENST00000488111 TOM1O60784 492 aa17.79■□□□□ 0.44
COPS7B-221ENST00000488111 ZC3H6P61129 1189 aaKnown RBP17.79■□□□□ 0.44
COPS7B-221ENST00000488111 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
COPS7B-221ENST00000488111 PEAK1Q9H792 1746 aa17.78■□□□□ 0.44
COPS7B-221ENST00000488111 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
COPS7B-221ENST00000488111 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
COPS7B-221ENST00000488111 APAF1O14727 1248 aa17.77■□□□□ 0.44
COPS7B-221ENST00000488111 HMOX1P09601 288 aa17.77■□□□□ 0.44
COPS7B-221ENST00000488111 HOXC9P31274 260 aa17.77■□□□□ 0.44
COPS7B-221ENST00000488111 USP54Q70EL1 1684 aa17.77■□□□□ 0.44
COPS7B-221ENST00000488111 FLT4P35916 1363 aa17.77■□□□□ 0.44
COPS7B-221ENST00000488111 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
COPS7B-221ENST00000488111 ROBO1Q9Y6N7 1651 aa17.76■□□□□ 0.43
COPS7B-221ENST00000488111 NFAT5O94916 1531 aa17.76■□□□□ 0.43
COPS7B-221ENST00000488111 MED1Q15648 1581 aaPredicted RBP17.76■□□□□ 0.43
COPS7B-221ENST00000488111 ARHGEF10O15013 1369 aa17.76■□□□□ 0.43
COPS7B-221ENST00000488111 RRP1P56182 461 aaKnown RBP17.75■□□□□ 0.43
COPS7B-221ENST00000488111 ARHGEF25Q86VW2 580 aa17.75■□□□□ 0.43
COPS7B-221ENST00000488111 SLIT3O75094 1523 aa17.75■□□□□ 0.43
COPS7B-221ENST00000488111 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
COPS7B-221ENST00000488111 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
COPS7B-221ENST00000488111 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
COPS7B-221ENST00000488111 RRP7AQ9Y3A4 280 aaKnown RBP17.74■□□□□ 0.43
COPS7B-221ENST00000488111 IP6K1Q92551 441 aa17.73■□□□□ 0.43
COPS7B-221ENST00000488111 NHSL1Q5SYE7 1610 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 TCP11L2Q8N4U5 519 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 PLEKHF1Q96S99 279 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
COPS7B-221ENST00000488111 HAP1P54257 671 aaPredicted RBP17.71■□□□□ 0.43
COPS7B-221ENST00000488111 GSE1Q14687 1217 aa17.71■□□□□ 0.43
COPS7B-221ENST00000488111 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
COPS7B-221ENST00000488111 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
COPS7B-221ENST00000488111 FCHSD2O94868 740 aa17.71■□□□□ 0.42
COPS7B-221ENST00000488111 CHRNA2Q15822 529 aa17.71■□□□□ 0.42
COPS7B-221ENST00000488111 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
COPS7B-221ENST00000488111 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
COPS7B-221ENST00000488111 EYA1Q99502 592 aa17.7■□□□□ 0.42
COPS7B-221ENST00000488111 LTN1O94822 1766 aa17.7■□□□□ 0.42
COPS7B-221ENST00000488111 RTL1A6NKG5 1358 aa17.69■□□□□ 0.42
COPS7B-221ENST00000488111 PHACTR3Q96KR7 559 aa17.68■□□□□ 0.42
COPS7B-221ENST00000488111 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
COPS7B-221ENST00000488111 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
COPS7B-221ENST00000488111 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
COPS7B-221ENST00000488111 CDCA7LQ96GN5 454 aa17.67■□□□□ 0.42
COPS7B-221ENST00000488111 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
COPS7B-221ENST00000488111 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-221ENST00000488111 PHRF1Q9P1Y6 1649 aaKnown RBP17.66■□□□□ 0.42
COPS7B-221ENST00000488111 ANKRD24Q8TF21 1146 aa17.66■□□□□ 0.42
COPS7B-221ENST00000488111 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
COPS7B-221ENST00000488111 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
COPS7B-221ENST00000488111 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
COPS7B-221ENST00000488111 PRDM11Q9NQV5 511 aa17.65■□□□□ 0.42
COPS7B-221ENST00000488111 RCAN3Q9UKA8 241 aa17.65■□□□□ 0.42
COPS7B-221ENST00000488111 IGSF1Q8N6C5 1336 aa17.64■□□□□ 0.41
COPS7B-221ENST00000488111 NFKBIBQ15653 356 aa17.64■□□□□ 0.41
COPS7B-221ENST00000488111 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
COPS7B-221ENST00000488111 CRYBG1Q9Y4K1 1723 aa17.63■□□□□ 0.41
COPS7B-221ENST00000488111 RIPK4P57078 832 aa17.62■□□□□ 0.41
COPS7B-221ENST00000488111 WWC1Q8IX03 1113 aa17.62■□□□□ 0.41
COPS7B-221ENST00000488111 ZNF521Q96K83 1311 aa17.62■□□□□ 0.41
COPS7B-221ENST00000488111 PHLPP1O60346 1717 aa17.62■□□□□ 0.41
COPS7B-221ENST00000488111 CPDO75976 1380 aa17.61■□□□□ 0.41
COPS7B-221ENST00000488111 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
COPS7B-221ENST00000488111 ERBB3P21860 1342 aa17.61■□□□□ 0.41
COPS7B-221ENST00000488111 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
COPS7B-221ENST00000488111 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
COPS7B-221ENST00000488111 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
COPS7B-221ENST00000488111 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
COPS7B-221ENST00000488111 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
COPS7B-221ENST00000488111 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
COPS7B-221ENST00000488111 PDE3BQ13370 1112 aa17.59■□□□□ 0.41
COPS7B-221ENST00000488111 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
COPS7B-221ENST00000488111 KDRP35968 1356 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms