RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-217ENST00000488087 TRMT44Q8IYL2 757 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-217ENST00000488087 SERPINA10Q9UK55 444 aa7.53□□□□□ -1.2
ECHDC1-217ENST00000488087 CDV3Q9UKY7 258 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-217ENST00000488087 DGAT1O75907 488 aa7.52□□□□□ -1.21
ECHDC1-217ENST00000488087 CEP126Q9P2H0 1117 aa7.52□□□□□ -1.21
ECHDC1-217ENST00000488087 TLL2Q9Y6L7 1015 aa7.52□□□□□ -1.21
ECHDC1-217ENST00000488087 RAB15P59190 212 aa7.51□□□□□ -1.21
ECHDC1-217ENST00000488087 TNFRSF10AO00220 468 aa7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 GIGYF1O75420 1035 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 MYT1Q01538 1121 aa7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 TREML4Q6UXN2 200 aa7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 RNF135Q8IUD6 432 aa7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 KCTD15Q96SI1 283 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 PKD2L1Q9P0L9 805 aa7.5□□□□□ -1.21
ECHDC1-217ENST00000488087 TTC24A2A3L6 582 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-217ENST00000488087 SIAH2O43255 324 aa7.49□□□□□ -1.21
ECHDC1-217ENST00000488087 ALDH1A1P00352 501 aa7.49□□□□□ -1.21
ECHDC1-217ENST00000488087 MAP4K5Q9Y4K4 846 aa7.49□□□□□ -1.21
ECHDC1-217ENST00000488087 SKIP12755 728 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 FSHRP23945 695 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 CYP4X1Q8N118 509 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 UCN2Q96RP3 112 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 WASF2Q9Y6W5 498 aa7.48□□□□□ -1.21
ECHDC1-217ENST00000488087 POTECB2RU33 542 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 PIK3CDO00329 1044 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 GDF9O60383 454 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 ADH1CP00326 375 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 SEPT12Q8IYM1 358 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 MPNDQ8N594 471 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 SNIP1Q8TAD8 396 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 PPP1R12CQ9BZL4 782 aa7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 TFIP11Q9UBB9 837 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-217ENST00000488087 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-217ENST00000488087 ATP9BO43861 1147 aa7.46□□□□□ -1.22
ECHDC1-217ENST00000488087 RFX1P22670 979 aa7.46□□□□□ -1.22
ECHDC1-217ENST00000488087 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-217ENST00000488087 TBC1D9Q6ZT07 1266 aa7.46□□□□□ -1.22
ECHDC1-217ENST00000488087 TRIM67Q6ZTA4 783 aa7.46□□□□□ -1.22
ECHDC1-217ENST00000488087 ESPNB1AK53 854 aa7.45□□□□□ -1.22
ECHDC1-217ENST00000488087 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
ECHDC1-217ENST00000488087 NFATC2IPQ8NCF5 419 aa7.45□□□□□ -1.22
ECHDC1-217ENST00000488087 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
ECHDC1-217ENST00000488087 PCDHB11Q9Y5F2 797 aa7.45□□□□□ -1.22
ECHDC1-217ENST00000488087 J3QL48 77 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 LMOD1P29536 600 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 GRM5P41594 1212 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 PRR20EP86478 221 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 PRR20CP86479 221 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 PRR20DP86480 221 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 PRR20BP86481 221 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 PRR20AP86496 221 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 DHX9Q08211 1270 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 NR5A1Q13285 461 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 CCDC116Q8IYX3 515 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 PHTF2Q8N3S3 785 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 STK17AQ9UEE5 414 aa7.44□□□□□ -1.22
ECHDC1-217ENST00000488087 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 ERVH48-1M5A8F1 160 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 NNTQ13423 1086 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 MAP7D1Q3KQU3 841 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 CFAP70Q5T0N1 1121 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 DEPDC4Q8N2C3 294 aa7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 CCDC85AQ96PX6 553 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 MAFBQ9Y5Q3 323 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-217ENST00000488087 USP17L3A6NCW0 530 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 USP17L4A6NCW7 530 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 FAM187AA6NFU0 413 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 NR3C2P08235 984 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 EML3Q32P44 896 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 USP17L2Q6R6M4 530 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 USP17L1Q7RTZ2 530 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 ESF1Q9H501 851 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 TOR4AQ9NXH8 423 aa7.42□□□□□ -1.22
ECHDC1-217ENST00000488087 NCOA4Q13772 614 aa7.41□□□□□ -1.22
ECHDC1-217ENST00000488087 PPP1R26Q5T8A7 1209 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-217ENST00000488087 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
ECHDC1-217ENST00000488087 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
ECHDC1-217ENST00000488087 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-217ENST00000488087 CDCA7Q9BWT1 371 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-217ENST00000488087 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
ECHDC1-217ENST00000488087 CHIC2Q9UKJ5 165 aa7.4□□□□□ -1.22
ECHDC1-217ENST00000488087 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 SMPD1P17405 629 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 USP4Q13107 963 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 CDCA8Q53HL2 280 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 PLEKHM2Q8IWE5 1019 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 SIRT1Q96EB6 747 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 CYLDQ9NQC7 956 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
ECHDC1-217ENST00000488087 WFS1O76024 890 aa7.38□□□□□ -1.23
ECHDC1-217ENST00000488087 WDR4P57081 412 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms