RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CRB1P82279 1406 aa16.03■□□□□ 0.16
SPEN-205ENST00000487496 COL18A1P39060 1754 aa16.03■□□□□ 0.16
SPEN-205ENST00000487496 SF3B2Q13435 895 aaKnown RBP16.03■□□□□ 0.16
SPEN-205ENST00000487496 NFAT5O94916 1531 aa16.03■□□□□ 0.16
SPEN-205ENST00000487496 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
SPEN-205ENST00000487496 TOM1L2Q6ZVM7 507 aa16.02■□□□□ 0.16
SPEN-205ENST00000487496 DEFB132Q7Z7B7 95 aa16.02■□□□□ 0.16
SPEN-205ENST00000487496 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
SPEN-205ENST00000487496 PDE3BQ13370 1112 aa16.01■□□□□ 0.15
SPEN-205ENST00000487496 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
SPEN-205ENST00000487496 USP54Q70EL1 1684 aa16■□□□□ 0.15
SPEN-205ENST00000487496 OVOS2A0A0J9YW53 1432 aa16■□□□□ 0.15
SPEN-205ENST00000487496 OVOS2Q6IE36 1432 aa16■□□□□ 0.15
SPEN-205ENST00000487496 FAM196AQ6ZSG2 479 aa15.99■□□□□ 0.15
SPEN-205ENST00000487496 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
SPEN-205ENST00000487496 CARD10Q9BWT7 1032 aa15.97■□□□□ 0.15
SPEN-205ENST00000487496 ABCC6O95255 1503 aa15.96■□□□□ 0.15
SPEN-205ENST00000487496 BAG6P46379 1132 aa15.96■□□□□ 0.15
SPEN-205ENST00000487496 COG3Q96JB2 828 aa15.96■□□□□ 0.15
SPEN-205ENST00000487496 FYB1O15117 783 aa15.95■□□□□ 0.14
SPEN-205ENST00000487496 CDCA7Q9BWT1 371 aaPredicted RBP15.95■□□□□ 0.14
SPEN-205ENST00000487496 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
SPEN-205ENST00000487496 ERBB3P21860 1342 aa15.94■□□□□ 0.14
SPEN-205ENST00000487496 TRIM37O94972 964 aa15.94■□□□□ 0.14
SPEN-205ENST00000487496 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
SPEN-205ENST00000487496 DDB1Q16531 1140 aa15.94■□□□□ 0.14
SPEN-205ENST00000487496 PARP4Q9UKK3 1724 aaKnown RBP15.94■□□□□ 0.14
SPEN-205ENST00000487496 FBLN1P23142 703 aa15.93■□□□□ 0.14
SPEN-205ENST00000487496 EN1Q05925 392 aaPredicted RBP15.93■□□□□ 0.14
SPEN-205ENST00000487496 IP6K1Q92551 441 aa15.93■□□□□ 0.14
SPEN-205ENST00000487496 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
SPEN-205ENST00000487496 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
SPEN-205ENST00000487496 HSPA5P11021 654 aaKnown RBP15.92■□□□□ 0.14
SPEN-205ENST00000487496 ANKRD24Q8TF21 1146 aa15.92■□□□□ 0.14
SPEN-205ENST00000487496 GGNBP2Q9H3C7 697 aa15.92■□□□□ 0.14
SPEN-205ENST00000487496 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
SPEN-205ENST00000487496 LTN1O94822 1766 aa15.91■□□□□ 0.14
SPEN-205ENST00000487496 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
SPEN-205ENST00000487496 NLRP2Q9NX02 1062 aa15.91■□□□□ 0.14
SPEN-205ENST00000487496 DISP2A7MBM2 1401 aa15.91■□□□□ 0.14
SPEN-205ENST00000487496 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
SPEN-205ENST00000487496 APBA3O96018 575 aa15.9■□□□□ 0.14
SPEN-205ENST00000487496 AMPHP49418 695 aa15.89■□□□□ 0.13
SPEN-205ENST00000487496 POLR3GLQ9BT43 218 aa15.89■□□□□ 0.13
SPEN-205ENST00000487496 LRRC37A3O60309 1634 aa15.89■□□□□ 0.13
SPEN-205ENST00000487496 MYOM1P52179 1685 aa15.89■□□□□ 0.13
SPEN-205ENST00000487496 TNS1Q9HBL0 1735 aaKnown RBP15.88■□□□□ 0.13
SPEN-205ENST00000487496 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
SPEN-205ENST00000487496 NSD3Q9BZ95 1437 aa15.88■□□□□ 0.13
SPEN-205ENST00000487496 EXOC5O00471 708 aa15.88■□□□□ 0.13
SPEN-205ENST00000487496 HOXC9P31274 260 aa15.88■□□□□ 0.13
SPEN-205ENST00000487496 EZH2Q15910 746 aaKnown RBP15.88■□□□□ 0.13
SPEN-205ENST00000487496 MARCH10Q8NA82 808 aaPredicted RBP15.88■□□□□ 0.13
SPEN-205ENST00000487496 CAMKK2Q96RR4 588 aa15.88■□□□□ 0.13
SPEN-205ENST00000487496 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
SPEN-205ENST00000487496 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
SPEN-205ENST00000487496 IL2RBP14784 551 aa15.86■□□□□ 0.13
SPEN-205ENST00000487496 WNK3Q9BYP7 1800 aa15.86■□□□□ 0.13
SPEN-205ENST00000487496 PEAK1Q9H792 1746 aa15.85■□□□□ 0.13
SPEN-205ENST00000487496 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
SPEN-205ENST00000487496 PARD3Q8TEW0 1356 aa15.84■□□□□ 0.13
SPEN-205ENST00000487496 BCL9O00512 1426 aa15.84■□□□□ 0.13
SPEN-205ENST00000487496 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
SPEN-205ENST00000487496 TNS2Q63HR2 1409 aa15.83■□□□□ 0.12
SPEN-205ENST00000487496 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
SPEN-205ENST00000487496 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
SPEN-205ENST00000487496 KIF20BQ96Q89 1820 aa15.82■□□□□ 0.12
SPEN-205ENST00000487496 PSDA5PKW4 1024 aaPredicted RBP15.81■□□□□ 0.12
SPEN-205ENST00000487496 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
SPEN-205ENST00000487496 PANK3Q9H999 370 aa15.81■□□□□ 0.12
SPEN-205ENST00000487496 KIF24Q5T7B8 1368 aa15.8■□□□□ 0.12
SPEN-205ENST00000487496 INSRP06213 1382 aa15.79■□□□□ 0.12
SPEN-205ENST00000487496 FLT4P35916 1363 aa15.79■□□□□ 0.12
SPEN-205ENST00000487496 PLSCR1O15162 318 aa15.79■□□□□ 0.12
SPEN-205ENST00000487496 R3HDM1Q15032 1099 aaKnown RBP15.79■□□□□ 0.12
SPEN-205ENST00000487496 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
SPEN-205ENST00000487496 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
SPEN-205ENST00000487496 EMILIN1Q9Y6C2 1016 aa15.79■□□□□ 0.12
SPEN-205ENST00000487496 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
SPEN-205ENST00000487496 SBF2Q86WG5 1849 aa15.78■□□□□ 0.12
SPEN-205ENST00000487496 KCNQ2O43526 872 aa15.77■□□□□ 0.12
SPEN-205ENST00000487496 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
SPEN-205ENST00000487496 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
SPEN-205ENST00000487496 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
SPEN-205ENST00000487496 ACSBG1Q96GR2 724 aa15.76■□□□□ 0.11
SPEN-205ENST00000487496 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
SPEN-205ENST00000487496 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
SPEN-205ENST00000487496 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
SPEN-205ENST00000487496 RREB1Q92766 1687 aa15.75■□□□□ 0.11
SPEN-205ENST00000487496 MEGF6O75095 1541 aa15.74■□□□□ 0.11
SPEN-205ENST00000487496 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
SPEN-205ENST00000487496 PROM2Q8N271 834 aa15.74■□□□□ 0.11
SPEN-205ENST00000487496 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
SPEN-205ENST00000487496 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
SPEN-205ENST00000487496 RGPD2P0DJD1 1756 aa15.74■□□□□ 0.11
SPEN-205ENST00000487496 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
SPEN-205ENST00000487496 RAPGEF4Q8WZA2 1011 aa15.73■□□□□ 0.11
SPEN-205ENST00000487496 NUP188Q5SRE5 1749 aa15.72■□□□□ 0.11
SPEN-205ENST00000487496 TATP17735 454 aaPredicted RBP15.71■□□□□ 0.11
SPEN-205ENST00000487496 TXNRD1Q16881 649 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms