RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 USP47Q96K76 1375 aa31.65■■■□□ 2.66
SRM-205ENST00000487300 SF3B2Q13435 895 aaKnown RBP31.64■■■□□ 2.66
SRM-205ENST00000487300 FAM182BQ5T319 152 aa31.64■■■□□ 2.66
SRM-205ENST00000487300 TIMELESSQ9UNS1 1208 aa31.64■■■□□ 2.66
SRM-205ENST00000487300 OVOS2A0A0J9YW53 1432 aa31.64■■■□□ 2.66
SRM-205ENST00000487300 OVOS2Q6IE36 1432 aa31.64■■■□□ 2.66
SRM-205ENST00000487300 SBF2Q86WG5 1849 aa31.63■■■□□ 2.65
SRM-205ENST00000487300 SLC24A1O60721 1099 aa31.63■■■□□ 2.65
SRM-205ENST00000487300 AXIN2Q9Y2T1 843 aa31.63■■■□□ 2.65
SRM-205ENST00000487300 WDR17Q8IZU2 1322 aa31.61■■■□□ 2.65
SRM-205ENST00000487300 HDGFL2Q7Z4V5 671 aaPredicted RBP31.61■■■□□ 2.65
SRM-205ENST00000487300 TMC1Q8TDI8 760 aa31.61■■■□□ 2.65
SRM-205ENST00000487300 ZRANB1Q9UGI0 708 aa31.61■■■□□ 2.65
SRM-205ENST00000487300 MYOM1P52179 1685 aa31.6■■■□□ 2.65
SRM-205ENST00000487300 TERF2IPQ9NYB0 399 aa31.6■■■□□ 2.65
SRM-205ENST00000487300 NME9Q86XW9 330 aa31.59■■■□□ 2.65
SRM-205ENST00000487300 RREB1Q92766 1687 aa31.59■■■□□ 2.65
SRM-205ENST00000487300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.58■■■□□ 2.65
SRM-205ENST00000487300 ZBTB7CA1YPR0 619 aa31.57■■■□□ 2.64
SRM-205ENST00000487300 FAM196AQ6ZSG2 479 aa31.57■■■□□ 2.64
SRM-205ENST00000487300 BAG6P46379 1132 aa31.56■■■□□ 2.64
SRM-205ENST00000487300 FAM208AQ9UK61 1670 aaKnown RBP31.54■■■□□ 2.64
SRM-205ENST00000487300 RGPD3A6NKT7 1758 aaPredicted RBP31.54■■■□□ 2.64
SRM-205ENST00000487300 RGPD4Q7Z3J3 1758 aa31.54■■■□□ 2.64
SRM-205ENST00000487300 SOX12O15370 315 aa31.53■■■□□ 2.64
SRM-205ENST00000487300 ANKRD36BQ8N2N9 1353 aa31.53■■■□□ 2.64
SRM-205ENST00000487300 KIF20BQ96Q89 1820 aa31.52■■■□□ 2.64
SRM-205ENST00000487300 PDE3BQ13370 1112 aa31.51■■■□□ 2.63
SRM-205ENST00000487300 TOM1L2Q6ZVM7 507 aa31.51■■■□□ 2.63
SRM-205ENST00000487300 NUP188Q5SRE5 1749 aa31.51■■■□□ 2.63
SRM-205ENST00000487300 CARD10Q9BWT7 1032 aa31.49■■■□□ 2.63
SRM-205ENST00000487300 PCGF6Q9BYE7 350 aa31.49■■■□□ 2.63
SRM-205ENST00000487300 OVOS2A0A0G2JMS6 1433 aa31.49■■■□□ 2.63
SRM-205ENST00000487300 LRP5O75197 1615 aa31.48■■■□□ 2.63
SRM-205ENST00000487300 TMF1P82094 1093 aa31.47■■■□□ 2.63
SRM-205ENST00000487300 TRIM37O94972 964 aa31.46■■■□□ 2.63
SRM-205ENST00000487300 EN1Q05925 392 aaPredicted RBP31.46■■■□□ 2.63
SRM-205ENST00000487300 ERBB3P21860 1342 aa31.46■■■□□ 2.63
SRM-205ENST00000487300 PARD3Q8TEW0 1356 aa31.45■■■□□ 2.63
SRM-205ENST00000487300 CCDC7Q96M83 1385 aa31.45■■■□□ 2.63
SRM-205ENST00000487300 BCL9O00512 1426 aa31.44■■■□□ 2.62
SRM-205ENST00000487300 CDCA7Q9BWT1 371 aaPredicted RBP31.44■■■□□ 2.62
SRM-205ENST00000487300 C11orf95C9JLR9 678 aaPredicted RBP31.43■■■□□ 2.62
SRM-205ENST00000487300 DDB1Q16531 1140 aa31.41■■■□□ 2.62
SRM-205ENST00000487300 CAMKK2Q96RR4 588 aa31.41■■■□□ 2.62
SRM-205ENST00000487300 TNS2Q63HR2 1409 aa31.41■■■□□ 2.62
SRM-205ENST00000487300 RGPD2P0DJD1 1756 aa31.38■■■□□ 2.61
SRM-205ENST00000487300 CSB-PGBD3P0DP91 1061 aa31.38■■■□□ 2.61
SRM-205ENST00000487300 EZH2Q15910 746 aaKnown RBP31.37■■■□□ 2.61
SRM-205ENST00000487300 CDCA8Q53HL2 280 aa31.37■■■□□ 2.61
SRM-205ENST00000487300 NHSQ6T4R5 1651 aa31.35■■■□□ 2.61
SRM-205ENST00000487300 APBA3O96018 575 aa31.35■■■□□ 2.61
SRM-205ENST00000487300 MARCH10Q8NA82 808 aaPredicted RBP31.33■■■□□ 2.61
SRM-205ENST00000487300 COG3Q96JB2 828 aa31.33■■■□□ 2.61
SRM-205ENST00000487300 ANKRD26Q9UPS8 1709 aa31.32■■■□□ 2.61
SRM-205ENST00000487300 ANKRD24Q8TF21 1146 aa31.32■■■□□ 2.6
SRM-205ENST00000487300 IP6K1Q92551 441 aa31.32■■■□□ 2.6
SRM-205ENST00000487300 MAP3K19Q56UN5 1328 aa31.3■■■□□ 2.6
SRM-205ENST00000487300 SHANK3Q9BYB0 1731 aa31.3■■■□□ 2.6
SRM-205ENST00000487300 FYB1O15117 783 aa31.3■■■□□ 2.6
SRM-205ENST00000487300 RTL1A6NKG5 1358 aa31.3■■■□□ 2.6
SRM-205ENST00000487300 PSDA5PKW4 1024 aaPredicted RBP31.27■■■□□ 2.6
SRM-205ENST00000487300 NLRP2Q9NX02 1062 aa31.26■■■□□ 2.59
SRM-205ENST00000487300 CCER1Q8TC90 406 aaPredicted RBP31.25■■■□□ 2.59
SRM-205ENST00000487300 EXOC5O00471 708 aa31.24■■■□□ 2.59
SRM-205ENST00000487300 HOXC9P31274 260 aa31.24■■■□□ 2.59
SRM-205ENST00000487300 BCL11BQ9C0K0 894 aaPredicted RBP31.24■■■□□ 2.59
SRM-205ENST00000487300 NSD3Q9BZ95 1437 aa31.24■■■□□ 2.59
SRM-205ENST00000487300 IL2RBP14784 551 aa31.23■■■□□ 2.59
SRM-205ENST00000487300 CARD14Q9BXL6 1004 aa31.23■■■□□ 2.59
SRM-205ENST00000487300 GGNBP2Q9H3C7 697 aa31.23■■■□□ 2.59
SRM-205ENST00000487300 BTAF1O14981 1849 aa31.22■■■□□ 2.59
SRM-205ENST00000487300 PLSCR1O15162 318 aa31.22■■■□□ 2.59
SRM-205ENST00000487300 FBLN1P23142 703 aa31.22■■■□□ 2.59
SRM-205ENST00000487300 R3HDM1Q15032 1099 aaKnown RBP31.21■■■□□ 2.59
SRM-205ENST00000487300 PTF1AQ7RTS3 328 aa31.21■■■□□ 2.59
SRM-205ENST00000487300 KIF24Q5T7B8 1368 aa31.18■■■□□ 2.58
SRM-205ENST00000487300 MAP2P11137 1827 aaKnown RBP31.18■■■□□ 2.58
SRM-205ENST00000487300 CASZ1Q86V15 1759 aa31.16■■■□□ 2.58
SRM-205ENST00000487300 DOT1LQ8TEK3 1739 aa31.15■■■□□ 2.58
SRM-205ENST00000487300 AMPHP49418 695 aa31.15■■■□□ 2.58
SRM-205ENST00000487300 RRS1Q15050 365 aaKnown RBP31.15■■■□□ 2.58
SRM-205ENST00000487300 EIF4G2P78344 907 aaKnown RBP eCLIP31.14■■■□□ 2.58
SRM-205ENST00000487300 MEGF6O75095 1541 aa31.14■■■□□ 2.57
SRM-205ENST00000487300 INSRP06213 1382 aa31.13■■■□□ 2.57
SRM-205ENST00000487300 LTV1Q96GA3 475 aaPredicted RBP31.12■■■□□ 2.57
SRM-205ENST00000487300 FLT4P35916 1363 aa31.12■■■□□ 2.57
SRM-205ENST00000487300 PAPPAQ13219 1627 aa31.12■■■□□ 2.57
SRM-205ENST00000487300 HSPA5P11021 654 aaKnown RBP31.11■■■□□ 2.57
SRM-205ENST00000487300 SMG6Q86US8 1419 aaKnown RBP31.09■■■□□ 2.57
SRM-205ENST00000487300 KAT6BQ8WYB5 2073 aa31.09■■■□□ 2.57
SRM-205ENST00000487300 PROM2Q8N271 834 aa31.09■■■□□ 2.57
SRM-205ENST00000487300 PKD1L3Q7Z443 1732 aa31.08■■■□□ 2.57
SRM-205ENST00000487300 NBPF14Q5TI25 921 aa31.08■■■□□ 2.57
SRM-205ENST00000487300 NCAPD2Q15021 1401 aa31.07■■■□□ 2.57
SRM-205ENST00000487300 KCNQ2O43526 872 aa31.07■■■□□ 2.56
SRM-205ENST00000487300 CGNL1Q0VF96 1302 aa31.06■■■□□ 2.56
SRM-205ENST00000487300 LY75O60449 1722 aa31.05■■■□□ 2.56
SRM-205ENST00000487300 NBPF6Q5VWK0 638 aa31.04■■■□□ 2.56
SRM-205ENST00000487300 NBPF4Q96M43 638 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms