RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 WDR17Q8IZU2 1322 aa37.66■■■■□ 3.62
RCC1-212ENST00000486790 CPSF1Q10570 1443 aaKnown RBP37.66■■■■□ 3.62
RCC1-212ENST00000486790 CSB-PGBD3P0DP91 1061 aa37.64■■■■□ 3.62
RCC1-212ENST00000486790 ARHGEF25Q86VW2 580 aa37.64■■■■□ 3.62
RCC1-212ENST00000486790 TONSLQ96HA7 1378 aa37.62■■■■□ 3.61
RCC1-212ENST00000486790 COL18A1P39060 1754 aa37.61■■■■□ 3.61
RCC1-212ENST00000486790 SOX12O15370 315 aa37.6■■■■□ 3.61
RCC1-212ENST00000486790 RREB1Q92766 1687 aa37.59■■■■□ 3.61
RCC1-212ENST00000486790 HDGFL2Q7Z4V5 671 aaPredicted RBP37.58■■■■□ 3.61
RCC1-212ENST00000486790 AXIN2Q9Y2T1 843 aa37.58■■■■□ 3.61
RCC1-212ENST00000486790 CARD10Q9BWT7 1032 aa37.57■■■■□ 3.6
RCC1-212ENST00000486790 ABCC6O95255 1503 aa37.56■■■■□ 3.6
RCC1-212ENST00000486790 MON2Q7Z3U7 1717 aa37.56■■■■□ 3.6
RCC1-212ENST00000486790 LRRC37A3O60309 1634 aa37.55■■■■□ 3.6
RCC1-212ENST00000486790 TMC1Q8TDI8 760 aa37.55■■■■□ 3.6
RCC1-212ENST00000486790 NUP188Q5SRE5 1749 aa37.53■■■■□ 3.6
RCC1-212ENST00000486790 WNK3Q9BYP7 1800 aa37.52■■■■□ 3.6
RCC1-212ENST00000486790 SLC24A1O60721 1099 aa37.52■■■■□ 3.6
RCC1-212ENST00000486790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.52■■■■□ 3.6
RCC1-212ENST00000486790 RGPD5Q99666 1765 aa37.51■■■■□ 3.6
RCC1-212ENST00000486790 TERF2IPQ9NYB0 399 aa37.51■■■■□ 3.6
RCC1-212ENST00000486790 CCDC7Q96M83 1385 aa37.51■■■■□ 3.59
RCC1-212ENST00000486790 PLSCR1O15162 318 aa37.5■■■■□ 3.59
RCC1-212ENST00000486790 BCL11BQ9C0K0 894 aaPredicted RBP37.5■■■■□ 3.59
RCC1-212ENST00000486790 PEAK1Q9H792 1746 aa37.5■■■■□ 3.59
RCC1-212ENST00000486790 EXOC5O00471 708 aa37.49■■■■□ 3.59
RCC1-212ENST00000486790 PUS7Q96PZ0 661 aaKnown RBP37.49■■■■□ 3.59
RCC1-212ENST00000486790 USP31Q70CQ4 1352 aa37.49■■■■□ 3.59
RCC1-212ENST00000486790 NFAT5O94916 1531 aa37.49■■■■□ 3.59
RCC1-212ENST00000486790 RGPD3A6NKT7 1758 aaPredicted RBP37.49■■■■□ 3.59
RCC1-212ENST00000486790 RGPD4Q7Z3J3 1758 aa37.49■■■■□ 3.59
RCC1-212ENST00000486790 SBF2Q86WG5 1849 aa37.49■■■■□ 3.59
RCC1-212ENST00000486790 BCL9O00512 1426 aa37.46■■■■□ 3.59
RCC1-212ENST00000486790 EDC4Q6P2E9 1401 aaKnown RBP37.43■■■■□ 3.58
RCC1-212ENST00000486790 USP54Q70EL1 1684 aa37.42■■■■□ 3.58
RCC1-212ENST00000486790 MARCH10Q8NA82 808 aaPredicted RBP37.41■■■■□ 3.58
RCC1-212ENST00000486790 SLC12A5Q9H2X9 1139 aa37.4■■■■□ 3.58
RCC1-212ENST00000486790 NINLQ9Y2I6 1382 aa37.4■■■■□ 3.58
RCC1-212ENST00000486790 NME9Q86XW9 330 aa37.39■■■■□ 3.58
RCC1-212ENST00000486790 SPON1Q9HCB6 807 aa37.39■■■■□ 3.58
RCC1-212ENST00000486790 CD163L1Q9NR16 1453 aa37.38■■■■□ 3.57
RCC1-212ENST00000486790 PPP1R1BQ9UD71 204 aaPredicted RBP37.37■■■■□ 3.57
RCC1-212ENST00000486790 NLRP2Q9NX02 1062 aa37.36■■■■□ 3.57
RCC1-212ENST00000486790 LTN1O94822 1766 aa37.36■■■■□ 3.57
RCC1-212ENST00000486790 ERBB3P21860 1342 aa37.36■■■■□ 3.57
RCC1-212ENST00000486790 TNS2Q63HR2 1409 aa37.33■■■■□ 3.57
RCC1-212ENST00000486790 KCNQ2O43526 872 aa37.32■■■■□ 3.56
RCC1-212ENST00000486790 A0A1W2PP64 1363 aa37.31■■■■□ 3.56
RCC1-212ENST00000486790 IL2RBP14784 551 aa37.3■■■■□ 3.56
RCC1-212ENST00000486790 DCAF8L1A6NGE4 600 aa37.29■■■■□ 3.56
RCC1-212ENST00000486790 ANKRD24Q8TF21 1146 aa37.29■■■■□ 3.56
RCC1-212ENST00000486790 ST20-MTHFSA0A0A6YYL1 179 aa37.26■■■■□ 3.56
RCC1-212ENST00000486790 COG3Q96JB2 828 aa37.24■■■■□ 3.55
RCC1-212ENST00000486790 STK32BQ9NY57 414 aa37.23■■■■□ 3.55
RCC1-212ENST00000486790 PTF1AQ7RTS3 328 aa37.22■■■■□ 3.55
RCC1-212ENST00000486790 KAT6BQ8WYB5 2073 aa37.22■■■■□ 3.55
RCC1-212ENST00000486790 TRIM26Q12899 539 aaPredicted RBP37.21■■■■□ 3.55
RCC1-212ENST00000486790 TXNRD1Q16881 649 aa37.21■■■■□ 3.55
RCC1-212ENST00000486790 IP6K1Q92551 441 aa37.21■■■■□ 3.55
RCC1-212ENST00000486790 TESK2Q96S53 571 aa37.21■■■■□ 3.55
RCC1-212ENST00000486790 FAM208AQ9UK61 1670 aaKnown RBP37.18■■■■□ 3.54
RCC1-212ENST00000486790 PROM2Q8N271 834 aa37.18■■■■□ 3.54
RCC1-212ENST00000486790 ANO8Q9HCE9 1232 aaPredicted RBP37.18■■■■□ 3.54
RCC1-212ENST00000486790 NHSQ6T4R5 1651 aa37.18■■■■□ 3.54
RCC1-212ENST00000486790 TMF1P82094 1093 aa37.17■■■■□ 3.54
RCC1-212ENST00000486790 AMPHP49418 695 aa37.14■■■■□ 3.54
RCC1-212ENST00000486790 CDCA8Q53HL2 280 aa37.14■■■■□ 3.54
RCC1-212ENST00000486790 ACSBG1Q96GR2 724 aa37.14■■■■□ 3.54
RCC1-212ENST00000486790 ANKRD36BQ8N2N9 1353 aa37.13■■■■□ 3.53
RCC1-212ENST00000486790 SLC15A2Q16348 729 aa37.12■■■■□ 3.53
RCC1-212ENST00000486790 LTV1Q96GA3 475 aaPredicted RBP37.11■■■■□ 3.53
RCC1-212ENST00000486790 CASZ1Q86V15 1759 aa37.11■■■■□ 3.53
RCC1-212ENST00000486790 USP47Q96K76 1375 aa37.06■■■■□ 3.52
RCC1-212ENST00000486790 MAP3K19Q56UN5 1328 aa37.06■■■■□ 3.52
RCC1-212ENST00000486790 ZBTB7AO95365 584 aa37.05■■■■□ 3.52
RCC1-212ENST00000486790 HOXC9P31274 260 aa37.05■■■■□ 3.52
RCC1-212ENST00000486790 DDX54Q8TDD1 881 aaKnown RBP37.04■■■■□ 3.52
RCC1-212ENST00000486790 BTAF1O14981 1849 aa37.03■■■■□ 3.52
RCC1-212ENST00000486790 RTL1A6NKG5 1358 aa37.03■■■■□ 3.52
RCC1-212ENST00000486790 MTFR1LQ9H019 292 aa37.01■■■■□ 3.52
RCC1-212ENST00000486790 SMG6Q86US8 1419 aaKnown RBP37■■■■□ 3.51
RCC1-212ENST00000486790 YY1P25490 414 aa36.99■■■■□ 3.51
RCC1-212ENST00000486790 SLC27A3Q5K4L6 730 aa36.98■■■■□ 3.51
RCC1-212ENST00000486790 ATF5Q9Y2D1 282 aaPredicted RBP36.98■■■■□ 3.51
RCC1-212ENST00000486790 PDGFDQ9GZP0 370 aaPredicted RBP36.97■■■■□ 3.51
RCC1-212ENST00000486790 CGNL1Q0VF96 1302 aa36.95■■■■□ 3.51
RCC1-212ENST00000486790 ZCRB1Q8TBF4 217 aaKnown RBP36.95■■■■□ 3.51
RCC1-212ENST00000486790 TIMELESSQ9UNS1 1208 aa36.95■■■■□ 3.51
RCC1-212ENST00000486790 FYB1O15117 783 aa36.94■■■■□ 3.5
RCC1-212ENST00000486790 SYTL4Q96C24 671 aaPredicted RBP36.93■■■■□ 3.5
RCC1-212ENST00000486790 PTGER2P43116 358 aa36.92■■■■□ 3.5
RCC1-212ENST00000486790 GGNBP2Q9H3C7 697 aa36.92■■■■□ 3.5
RCC1-212ENST00000486790 RRS1Q15050 365 aaKnown RBP36.9■■■■□ 3.5
RCC1-212ENST00000486790 RAPGEF4Q8WZA2 1011 aa36.9■■■■□ 3.5
RCC1-212ENST00000486790 FBLN1P23142 703 aa36.88■■■■□ 3.49
RCC1-212ENST00000486790 HMGB2P26583 209 aaKnown RBP36.88■■■■□ 3.49
RCC1-212ENST00000486790 MYOM1P52179 1685 aa36.88■■■■□ 3.49
RCC1-212ENST00000486790 KIF24Q5T7B8 1368 aa36.88■■■■□ 3.49
RCC1-212ENST00000486790 PAPPAQ13219 1627 aa36.88■■■■□ 3.49
RCC1-212ENST00000486790 KIF20BQ96Q89 1820 aa36.87■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms