RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ANO8Q9HCE9 1232 aaPredicted RBP25.2■■□□□ 1.62
MCF2L-226ENST00000486210 PPP1R1BQ9UD71 204 aaPredicted RBP25.2■■□□□ 1.62
MCF2L-226ENST00000486210 NINLQ9Y2I6 1382 aa25.19■■□□□ 1.62
MCF2L-226ENST00000486210 CENPJQ9HC77 1338 aaPredicted RBP25.19■■□□□ 1.62
MCF2L-226ENST00000486210 ZBTB7CA1YPR0 619 aa25.19■■□□□ 1.62
MCF2L-226ENST00000486210 RGPD5Q99666 1765 aa25.18■■□□□ 1.62
MCF2L-226ENST00000486210 NLRP6P59044 892 aa25.17■■□□□ 1.62
MCF2L-226ENST00000486210 AKAP12Q02952 1782 aa25.17■■□□□ 1.62
MCF2L-226ENST00000486210 DDB1Q16531 1140 aa25.16■■□□□ 1.62
MCF2L-226ENST00000486210 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
MCF2L-226ENST00000486210 L3MBTL2Q969R5 705 aa25.15■■□□□ 1.62
MCF2L-226ENST00000486210 AXIN2Q9Y2T1 843 aa25.15■■□□□ 1.62
MCF2L-226ENST00000486210 TOM1L2Q6ZVM7 507 aa25.14■■□□□ 1.62
MCF2L-226ENST00000486210 PROM2Q8N271 834 aa25.14■■□□□ 1.62
MCF2L-226ENST00000486210 PDGFDQ9GZP0 370 aaPredicted RBP25.14■■□□□ 1.62
MCF2L-226ENST00000486210 BCL11BQ9C0K0 894 aaPredicted RBP25.13■■□□□ 1.61
MCF2L-226ENST00000486210 MARCH10Q8NA82 808 aaPredicted RBP25.12■■□□□ 1.61
MCF2L-226ENST00000486210 BCL9O00512 1426 aa25.12■■□□□ 1.61
MCF2L-226ENST00000486210 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
MCF2L-226ENST00000486210 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
MCF2L-226ENST00000486210 MYOM1P52179 1685 aa25.11■■□□□ 1.61
MCF2L-226ENST00000486210 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
MCF2L-226ENST00000486210 ARHGEF25Q86VW2 580 aa25.07■■□□□ 1.6
MCF2L-226ENST00000486210 TRPM1Q7Z4N2 1603 aa25.06■■□□□ 1.6
MCF2L-226ENST00000486210 PTGER2P43116 358 aa25.06■■□□□ 1.6
MCF2L-226ENST00000486210 DCAF8L1A6NGE4 600 aa25.05■■□□□ 1.6
MCF2L-226ENST00000486210 ZBTB7AO95365 584 aa25.05■■□□□ 1.6
MCF2L-226ENST00000486210 CDCA7Q9BWT1 371 aaPredicted RBP25.05■■□□□ 1.6
MCF2L-226ENST00000486210 NFAT5O94916 1531 aa25.03■■□□□ 1.6
MCF2L-226ENST00000486210 CARD10Q9BWT7 1032 aa25.03■■□□□ 1.6
MCF2L-226ENST00000486210 TTC21BQ7Z4L5 1316 aa25.03■■□□□ 1.6
MCF2L-226ENST00000486210 TXNRD1Q16881 649 aa25.02■■□□□ 1.6
MCF2L-226ENST00000486210 EVC2Q86UK5 1308 aa25.01■■□□□ 1.59
MCF2L-226ENST00000486210 UTRNP46939 3433 aa25■■□□□ 1.59
MCF2L-226ENST00000486210 SOX12O15370 315 aa25■■□□□ 1.59
MCF2L-226ENST00000486210 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
MCF2L-226ENST00000486210 ATF5Q9Y2D1 282 aaPredicted RBP25■■□□□ 1.59
MCF2L-226ENST00000486210 NHSQ6T4R5 1651 aa25■■□□□ 1.59
MCF2L-226ENST00000486210 SLC15A2Q16348 729 aa24.99■■□□□ 1.59
MCF2L-226ENST00000486210 TIMELESSQ9UNS1 1208 aa24.99■■□□□ 1.59
MCF2L-226ENST00000486210 TNS2Q63HR2 1409 aa24.98■■□□□ 1.59
MCF2L-226ENST00000486210 CSB-PGBD3P0DP91 1061 aa24.98■■□□□ 1.59
MCF2L-226ENST00000486210 ZNF692Q9BU19 519 aaPredicted RBP24.98■■□□□ 1.59
MCF2L-226ENST00000486210 STK32BQ9NY57 414 aa24.98■■□□□ 1.59
MCF2L-226ENST00000486210 EXOC5O00471 708 aa24.97■■□□□ 1.59
MCF2L-226ENST00000486210 ABCC6O95255 1503 aa24.96■■□□□ 1.59
MCF2L-226ENST00000486210 TTC21AQ8NDW8 1320 aa24.96■■□□□ 1.59
MCF2L-226ENST00000486210 MON2Q7Z3U7 1717 aa24.96■■□□□ 1.59
MCF2L-226ENST00000486210 SGIP1Q9BQI5 828 aa24.96■■□□□ 1.59
MCF2L-226ENST00000486210 PAPPAQ13219 1627 aa24.96■■□□□ 1.59
MCF2L-226ENST00000486210 CCDC7Q96M83 1385 aa24.95■■□□□ 1.59
MCF2L-226ENST00000486210 SYT17Q9BSW7 474 aa24.94■■□□□ 1.58
MCF2L-226ENST00000486210 FHDC1Q9C0D6 1143 aaPredicted RBP24.94■■□□□ 1.58
MCF2L-226ENST00000486210 USP54Q70EL1 1684 aa24.94■■□□□ 1.58
MCF2L-226ENST00000486210 ZNF784Q8NCA9 323 aaPredicted RBP24.92■■□□□ 1.58
MCF2L-226ENST00000486210 MTFR1LQ9H019 292 aa24.92■■□□□ 1.58
MCF2L-226ENST00000486210 CHD4Q14839 1912 aa24.92■■□□□ 1.58
MCF2L-226ENST00000486210 BTAF1O14981 1849 aa24.91■■□□□ 1.58
MCF2L-226ENST00000486210 LTN1O94822 1766 aa24.91■■□□□ 1.58
MCF2L-226ENST00000486210 KTN1Q86UP2 1357 aaKnown RBP24.91■■□□□ 1.58
MCF2L-226ENST00000486210 ACSBG1Q96GR2 724 aa24.9■■□□□ 1.58
MCF2L-226ENST00000486210 ERBB3P21860 1342 aa24.87■■□□□ 1.57
MCF2L-226ENST00000486210 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
MCF2L-226ENST00000486210 USP31Q70CQ4 1352 aa24.87■■□□□ 1.57
MCF2L-226ENST00000486210 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
MCF2L-226ENST00000486210 ZNF827Q17R98 1081 aa24.83■■□□□ 1.57
MCF2L-226ENST00000486210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.83■■□□□ 1.57
MCF2L-226ENST00000486210 KAT6BQ8WYB5 2073 aa24.82■■□□□ 1.56
MCF2L-226ENST00000486210 IL2RBP14784 551 aa24.82■■□□□ 1.56
MCF2L-226ENST00000486210 NME9Q86XW9 330 aa24.82■■□□□ 1.56
MCF2L-226ENST00000486210 ARXQ96QS3 562 aa24.82■■□□□ 1.56
MCF2L-226ENST00000486210 LRRC4BQ9NT99 713 aa24.82■■□□□ 1.56
MCF2L-226ENST00000486210 NLRP2Q9NX02 1062 aa24.82■■□□□ 1.56
MCF2L-226ENST00000486210 MAP3K5Q99683 1374 aa24.81■■□□□ 1.56
MCF2L-226ENST00000486210 SBNO2Q9Y2G9 1366 aa24.81■■□□□ 1.56
MCF2L-226ENST00000486210 QSER1Q2KHR3 1735 aa24.81■■□□□ 1.56
MCF2L-226ENST00000486210 COL24A1Q17RW2 1714 aa24.8■■□□□ 1.56
MCF2L-226ENST00000486210 TUBGCP6Q96RT7 1819 aa24.78■■□□□ 1.56
MCF2L-226ENST00000486210 ANKRD24Q8TF21 1146 aa24.78■■□□□ 1.56
MCF2L-226ENST00000486210 AKT1S1Q96B36 256 aa24.76■■□□□ 1.55
MCF2L-226ENST00000486210 FAM208AQ9UK61 1670 aaKnown RBP24.72■■□□□ 1.55
MCF2L-226ENST00000486210 EDC4Q6P2E9 1401 aaKnown RBP24.71■■□□□ 1.55
MCF2L-226ENST00000486210 C1QTNF8P60827 252 aa24.71■■□□□ 1.55
MCF2L-226ENST00000486210 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
MCF2L-226ENST00000486210 SLC12A5Q9H2X9 1139 aa24.71■■□□□ 1.55
MCF2L-226ENST00000486210 DOT1LQ8TEK3 1739 aa24.71■■□□□ 1.55
MCF2L-226ENST00000486210 LY75O60449 1722 aa24.7■■□□□ 1.54
MCF2L-226ENST00000486210 SHANK3Q9BYB0 1731 aa24.7■■□□□ 1.54
MCF2L-226ENST00000486210 PNPLA7Q6ZV29 1317 aa24.7■■□□□ 1.54
MCF2L-226ENST00000486210 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
MCF2L-226ENST00000486210 TMC1Q8TDI8 760 aa24.7■■□□□ 1.54
MCF2L-226ENST00000486210 A0A1W2PP64 1363 aa24.68■■□□□ 1.54
MCF2L-226ENST00000486210 RGPD2P0DJD1 1756 aa24.68■■□□□ 1.54
MCF2L-226ENST00000486210 SLC27A3Q5K4L6 730 aa24.68■■□□□ 1.54
MCF2L-226ENST00000486210 HDGFL2Q7Z4V5 671 aaPredicted RBP24.68■■□□□ 1.54
MCF2L-226ENST00000486210 SLC16A10Q8TF71 515 aa24.68■■□□□ 1.54
MCF2L-226ENST00000486210 KCNQ4P56696 695 aa24.67■■□□□ 1.54
MCF2L-226ENST00000486210 GPR162Q16538 588 aa24.67■■□□□ 1.54
MCF2L-226ENST00000486210 DDX54Q8TDD1 881 aaKnown RBP24.67■■□□□ 1.54
MCF2L-226ENST00000486210 ZEB1P37275 1124 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms