RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PRM3Q9NNZ6 103 aa10.21□□□□□ -0.77
SMARCC1-207ENST00000485833 NBPF20Q3BBV1 942 aa10.2□□□□□ -0.78
SMARCC1-207ENST00000485833 CCDC116Q8IYX3 515 aa10.2□□□□□ -0.78
SMARCC1-207ENST00000485833 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
SMARCC1-207ENST00000485833 ZIC2O95409 532 aaPredicted RBP10.19□□□□□ -0.78
SMARCC1-207ENST00000485833 NR1H3Q13133 447 aa10.19□□□□□ -0.78
SMARCC1-207ENST00000485833 ITPKCQ96DU7 683 aa10.19□□□□□ -0.78
SMARCC1-207ENST00000485833 POTECB2RU33 542 aa10.18□□□□□ -0.78
SMARCC1-207ENST00000485833 GMPR2Q9P2T1 348 aaKnown RBP10.18□□□□□ -0.78
SMARCC1-207ENST00000485833 BMP1P13497 986 aa10.17□□□□□ -0.78
SMARCC1-207ENST00000485833 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-207ENST00000485833 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
SMARCC1-207ENST00000485833 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
SMARCC1-207ENST00000485833 ZNF330Q9Y3S2 320 aaPredicted RBP10.16□□□□□ -0.78
SMARCC1-207ENST00000485833 PCDHB9Q9Y5E1 797 aa10.16□□□□□ -0.78
SMARCC1-207ENST00000485833 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.78
SMARCC1-207ENST00000485833 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
SMARCC1-207ENST00000485833 TRIM46Q7Z4K8 759 aa10.15□□□□□ -0.78
SMARCC1-207ENST00000485833 SENP2Q9HC62 589 aa10.15□□□□□ -0.78
SMARCC1-207ENST00000485833 ESPNB1AK53 854 aa10.14□□□□□ -0.79
SMARCC1-207ENST00000485833 ZNF592Q92610 1267 aa10.14□□□□□ -0.79
SMARCC1-207ENST00000485833 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
SMARCC1-207ENST00000485833 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
SMARCC1-207ENST00000485833 C11orf95C9JLR9 678 aaPredicted RBP10.13□□□□□ -0.79
SMARCC1-207ENST00000485833 MCCD1P59942 119 aaPredicted RBP10.13□□□□□ -0.79
SMARCC1-207ENST00000485833 IRF5Q13568 498 aa10.13□□□□□ -0.79
SMARCC1-207ENST00000485833 KIFC2Q96AC6 838 aa10.13□□□□□ -0.79
SMARCC1-207ENST00000485833 TRIM47Q96LD4 638 aa10.13□□□□□ -0.79
SMARCC1-207ENST00000485833 FLIIQ13045 1269 aa10.12□□□□□ -0.79
SMARCC1-207ENST00000485833 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
SMARCC1-207ENST00000485833 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
SMARCC1-207ENST00000485833 MEIOBQ8N635 442 aa10.12□□□□□ -0.79
SMARCC1-207ENST00000485833 ABL2P42684 1182 aa10.11□□□□□ -0.79
SMARCC1-207ENST00000485833 RAB15P59190 212 aa10.11□□□□□ -0.79
SMARCC1-207ENST00000485833 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
SMARCC1-207ENST00000485833 GIGYF1O75420 1035 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-207ENST00000485833 SCARF1Q14162 830 aa10.09□□□□□ -0.79
SMARCC1-207ENST00000485833 ZFP42Q96MM3 310 aa10.09□□□□□ -0.79
SMARCC1-207ENST00000485833 COG6Q9Y2V7 657 aa10.09□□□□□ -0.79
SMARCC1-207ENST00000485833 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-207ENST00000485833 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
SMARCC1-207ENST00000485833 PURBQ96QR8 312 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-207ENST00000485833 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
SMARCC1-207ENST00000485833 UPP2O95045 317 aa10.07□□□□□ -0.8
SMARCC1-207ENST00000485833 Q6ZVU0 165 aa10.07□□□□□ -0.8
SMARCC1-207ENST00000485833 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
SMARCC1-207ENST00000485833 EIF4G2P78344 907 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMARCC1-207ENST00000485833 VAC14Q08AM6 782 aa10.06□□□□□ -0.8
SMARCC1-207ENST00000485833 CBLBQ13191 982 aa10.06□□□□□ -0.8
SMARCC1-207ENST00000485833 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
SMARCC1-207ENST00000485833 RNF20Q5VTR2 975 aa10.06□□□□□ -0.8
SMARCC1-207ENST00000485833 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
SMARCC1-207ENST00000485833 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
SMARCC1-207ENST00000485833 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
SMARCC1-207ENST00000485833 POM121Q96HA1 1249 aa10.05□□□□□ -0.8
SMARCC1-207ENST00000485833 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
SMARCC1-207ENST00000485833 BMP2P12643 396 aa10.04□□□□□ -0.8
SMARCC1-207ENST00000485833 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
SMARCC1-207ENST00000485833 RAD21O60216 631 aa10.03□□□□□ -0.8
SMARCC1-207ENST00000485833 LILRA1O75019 489 aa10.03□□□□□ -0.8
SMARCC1-207ENST00000485833 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
SMARCC1-207ENST00000485833 CYLDQ9NQC7 956 aa10.02□□□□□ -0.81
SMARCC1-207ENST00000485833 CEP126Q9P2H0 1117 aa10.02□□□□□ -0.81
SMARCC1-207ENST00000485833 ADH1AP07327 375 aa10.01□□□□□ -0.81
SMARCC1-207ENST00000485833 WWC1Q8IX03 1113 aa10.01□□□□□ -0.81
SMARCC1-207ENST00000485833 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
SMARCC1-207ENST00000485833 PCDHB11Q9Y5F2 797 aa10□□□□□ -0.81
SMARCC1-207ENST00000485833 SOX11P35716 441 aa9.99□□□□□ -0.81
SMARCC1-207ENST00000485833 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
SMARCC1-207ENST00000485833 SPINT1O43278 529 aa9.98□□□□□ -0.81
SMARCC1-207ENST00000485833 ERVK-9P63128 1117 aa9.98□□□□□ -0.81
SMARCC1-207ENST00000485833 RELBQ01201 579 aa9.98□□□□□ -0.81
SMARCC1-207ENST00000485833 CC2D2BQ6DHV5 1058 aa9.98□□□□□ -0.81
SMARCC1-207ENST00000485833 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-207ENST00000485833 MAN1A2O60476 641 aa9.96□□□□□ -0.82
SMARCC1-207ENST00000485833 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
SMARCC1-207ENST00000485833 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
SMARCC1-207ENST00000485833 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.82
SMARCC1-207ENST00000485833 TTLL8A6PVC2 850 aa9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 SOBPA7XYQ1 873 aa9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 PTGIRP43119 386 aa9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 SCTRP47872 440 aa9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 RNF135Q8IUD6 432 aa9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 PHTF2Q8N3S3 785 aa9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
SMARCC1-207ENST00000485833 DNMT3LQ9UJW3 386 aa9.94□□□□□ -0.82
SMARCC1-207ENST00000485833 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
SMARCC1-207ENST00000485833 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
SMARCC1-207ENST00000485833 INSM2Q96T92 566 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-207ENST00000485833 ZNF395Q9H8N7 513 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-207ENST00000485833 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
SMARCC1-207ENST00000485833 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-207ENST00000485833 OSBPL3Q9H4L5 887 aa9.92□□□□□ -0.82
SMARCC1-207ENST00000485833 POLMQ9NP87 494 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-207ENST00000485833 CHIC2Q9UKJ5 165 aa9.92□□□□□ -0.82
SMARCC1-207ENST00000485833 DOLKQ9UPQ8 538 aa9.92□□□□□ -0.82
SMARCC1-207ENST00000485833 TERTO14746 1132 aaKnown RBP9.91□□□□□ -0.82
SMARCC1-207ENST00000485833 TRAK2O60296 914 aa9.91□□□□□ -0.82
SMARCC1-207ENST00000485833 CTSOP43234 321 aaPredicted RBP9.91□□□□□ -0.82
SMARCC1-207ENST00000485833 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms