RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
LDLRAP1-206ENST00000485476 NUP188Q5SRE5 1749 aa17.12■□□□□ 0.33
LDLRAP1-206ENST00000485476 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
LDLRAP1-206ENST00000485476 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
LDLRAP1-206ENST00000485476 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
LDLRAP1-206ENST00000485476 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
LDLRAP1-206ENST00000485476 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
LDLRAP1-206ENST00000485476 EXOC5O00471 708 aa17.09■□□□□ 0.33
LDLRAP1-206ENST00000485476 YY1P25490 414 aa17.09■□□□□ 0.33
LDLRAP1-206ENST00000485476 MARCH10Q8NA82 808 aaPredicted RBP17.09■□□□□ 0.33
LDLRAP1-206ENST00000485476 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
LDLRAP1-206ENST00000485476 ABCC6O95255 1503 aa17.09■□□□□ 0.33
LDLRAP1-206ENST00000485476 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
LDLRAP1-206ENST00000485476 COL18A1P39060 1754 aa17.07■□□□□ 0.32
LDLRAP1-206ENST00000485476 QRICH2Q9H0J4 1663 aa17.07■□□□□ 0.32
LDLRAP1-206ENST00000485476 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
LDLRAP1-206ENST00000485476 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
LDLRAP1-206ENST00000485476 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
LDLRAP1-206ENST00000485476 PROM2Q8N271 834 aa17.06■□□□□ 0.32
LDLRAP1-206ENST00000485476 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
LDLRAP1-206ENST00000485476 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
LDLRAP1-206ENST00000485476 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
LDLRAP1-206ENST00000485476 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
LDLRAP1-206ENST00000485476 KTN1Q86UP2 1357 aaKnown RBP17.03■□□□□ 0.32
LDLRAP1-206ENST00000485476 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
LDLRAP1-206ENST00000485476 PUS7Q96PZ0 661 aaKnown RBP17.03■□□□□ 0.32
LDLRAP1-206ENST00000485476 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
LDLRAP1-206ENST00000485476 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
LDLRAP1-206ENST00000485476 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
LDLRAP1-206ENST00000485476 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
LDLRAP1-206ENST00000485476 NFAT5O94916 1531 aa17.01■□□□□ 0.31
LDLRAP1-206ENST00000485476 TNS2Q63HR2 1409 aa17■□□□□ 0.31
LDLRAP1-206ENST00000485476 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
LDLRAP1-206ENST00000485476 PTGER2P43116 358 aa16.99■□□□□ 0.31
LDLRAP1-206ENST00000485476 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
LDLRAP1-206ENST00000485476 ERBB3P21860 1342 aa16.98■□□□□ 0.31
LDLRAP1-206ENST00000485476 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
LDLRAP1-206ENST00000485476 IL2RBP14784 551 aa16.97■□□□□ 0.31
LDLRAP1-206ENST00000485476 HDGFL2Q7Z4V5 671 aaPredicted RBP16.97■□□□□ 0.31
LDLRAP1-206ENST00000485476 SIN3AQ96ST3 1273 aa16.97■□□□□ 0.31
LDLRAP1-206ENST00000485476 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
LDLRAP1-206ENST00000485476 CASZ1Q86V15 1759 aa16.97■□□□□ 0.31
LDLRAP1-206ENST00000485476 SOX12O15370 315 aa16.96■□□□□ 0.31
LDLRAP1-206ENST00000485476 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.3
LDLRAP1-206ENST00000485476 ZBTB7AO95365 584 aa16.95■□□□□ 0.3
LDLRAP1-206ENST00000485476 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
LDLRAP1-206ENST00000485476 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
LDLRAP1-206ENST00000485476 NEUROD1Q13562 356 aa16.94■□□□□ 0.3
LDLRAP1-206ENST00000485476 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
LDLRAP1-206ENST00000485476 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
LDLRAP1-206ENST00000485476 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
LDLRAP1-206ENST00000485476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
LDLRAP1-206ENST00000485476 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
LDLRAP1-206ENST00000485476 PDGFDQ9GZP0 370 aaPredicted RBP16.93■□□□□ 0.3
LDLRAP1-206ENST00000485476 USP54Q70EL1 1684 aa16.93■□□□□ 0.3
LDLRAP1-206ENST00000485476 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 NME9Q86XW9 330 aa16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 CD163L1Q9NR16 1453 aa16.92■□□□□ 0.3
LDLRAP1-206ENST00000485476 IP6K1Q92551 441 aa16.91■□□□□ 0.3
LDLRAP1-206ENST00000485476 MON2Q7Z3U7 1717 aa16.9■□□□□ 0.3
LDLRAP1-206ENST00000485476 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
LDLRAP1-206ENST00000485476 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
LDLRAP1-206ENST00000485476 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
LDLRAP1-206ENST00000485476 HMGB2P26583 209 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-206ENST00000485476 ARXQ96QS3 562 aa16.89■□□□□ 0.29
LDLRAP1-206ENST00000485476 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
LDLRAP1-206ENST00000485476 RGPD5Q99666 1765 aa16.88■□□□□ 0.29
LDLRAP1-206ENST00000485476 ACSBG1Q96GR2 724 aa16.88■□□□□ 0.29
LDLRAP1-206ENST00000485476 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
LDLRAP1-206ENST00000485476 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
LDLRAP1-206ENST00000485476 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
LDLRAP1-206ENST00000485476 COG3Q96JB2 828 aa16.84■□□□□ 0.29
LDLRAP1-206ENST00000485476 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
LDLRAP1-206ENST00000485476 PAPPAQ13219 1627 aa16.84■□□□□ 0.29
LDLRAP1-206ENST00000485476 POLD1P28340 1107 aa16.83■□□□□ 0.28
LDLRAP1-206ENST00000485476 MYOM1P52179 1685 aa16.83■□□□□ 0.28
LDLRAP1-206ENST00000485476 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
LDLRAP1-206ENST00000485476 ZNF827Q17R98 1081 aa16.82■□□□□ 0.28
LDLRAP1-206ENST00000485476 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
LDLRAP1-206ENST00000485476 DDX54Q8TDD1 881 aaKnown RBP16.81■□□□□ 0.28
LDLRAP1-206ENST00000485476 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
LDLRAP1-206ENST00000485476 HOXC9P31274 260 aa16.8■□□□□ 0.28
LDLRAP1-206ENST00000485476 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
LDLRAP1-206ENST00000485476 TESK2Q96S53 571 aa16.8■□□□□ 0.28
LDLRAP1-206ENST00000485476 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
LDLRAP1-206ENST00000485476 MAP3K19Q56UN5 1328 aa16.79■□□□□ 0.28
LDLRAP1-206ENST00000485476 AMPHP49418 695 aa16.79■□□□□ 0.28
LDLRAP1-206ENST00000485476 FAM208AQ9UK61 1670 aaKnown RBP16.78■□□□□ 0.28
LDLRAP1-206ENST00000485476 BTAF1O14981 1849 aa16.78■□□□□ 0.28
LDLRAP1-206ENST00000485476 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
LDLRAP1-206ENST00000485476 LTN1O94822 1766 aa16.78■□□□□ 0.28
LDLRAP1-206ENST00000485476 UTRNP46939 3433 aa16.77■□□□□ 0.28
LDLRAP1-206ENST00000485476 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.28
LDLRAP1-206ENST00000485476 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
LDLRAP1-206ENST00000485476 GPR162Q16538 588 aa16.77■□□□□ 0.28
LDLRAP1-206ENST00000485476 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms