RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 EZH2Q15910 746 aaKnown RBP27.65■■■□□ 2.02
R3HDM1-215ENST00000483021 TOM1L2Q6ZVM7 507 aa27.65■■■□□ 2.02
R3HDM1-215ENST00000483021 ARHGEF25Q86VW2 580 aa27.65■■■□□ 2.02
R3HDM1-215ENST00000483021 WDR17Q8IZU2 1322 aa27.65■■■□□ 2.02
R3HDM1-215ENST00000483021 PEAK1Q9H792 1746 aa27.64■■■□□ 2.02
R3HDM1-215ENST00000483021 APBA3O96018 575 aa27.64■■■□□ 2.02
R3HDM1-215ENST00000483021 CAMKK2Q96RR4 588 aa27.64■■■□□ 2.02
R3HDM1-215ENST00000483021 OVOS2A0A0G2JMS6 1433 aa27.63■■■□□ 2.01
R3HDM1-215ENST00000483021 OVOS2A0A0J9YW53 1432 aa27.63■■■□□ 2.01
R3HDM1-215ENST00000483021 OVOS2Q6IE36 1432 aa27.63■■■□□ 2.01
R3HDM1-215ENST00000483021 CD163L1Q9NR16 1453 aa27.62■■■□□ 2.01
R3HDM1-215ENST00000483021 NUP188Q5SRE5 1749 aa27.61■■■□□ 2.01
R3HDM1-215ENST00000483021 AXIN2Q9Y2T1 843 aa27.61■■■□□ 2.01
R3HDM1-215ENST00000483021 SBF2Q86WG5 1849 aa27.61■■■□□ 2.01
R3HDM1-215ENST00000483021 USP31Q70CQ4 1352 aa27.6■■■□□ 2.01
R3HDM1-215ENST00000483021 SOX12O15370 315 aa27.6■■■□□ 2.01
R3HDM1-215ENST00000483021 RGPD3A6NKT7 1758 aaPredicted RBP27.6■■■□□ 2.01
R3HDM1-215ENST00000483021 RGPD4Q7Z3J3 1758 aa27.6■■■□□ 2.01
R3HDM1-215ENST00000483021 DDB1Q16531 1140 aa27.59■■■□□ 2.01
R3HDM1-215ENST00000483021 CDCA7Q9BWT1 371 aaPredicted RBP27.59■■■□□ 2.01
R3HDM1-215ENST00000483021 LTN1O94822 1766 aa27.58■■■□□ 2.01
R3HDM1-215ENST00000483021 R3HDM1Q15032 1099 aaKnown RBP27.58■■■□□ 2.01
R3HDM1-215ENST00000483021 HDGFL2Q7Z4V5 671 aaPredicted RBP27.58■■■□□ 2.01
R3HDM1-215ENST00000483021 PUS7Q96PZ0 661 aaKnown RBP27.58■■■□□ 2.01
R3HDM1-215ENST00000483021 TMC1Q8TDI8 760 aa27.57■■■□□ 2
R3HDM1-215ENST00000483021 EDC4Q6P2E9 1401 aaKnown RBP27.57■■■□□ 2
R3HDM1-215ENST00000483021 CSB-PGBD3P0DP91 1061 aa27.56■■■□□ 2
R3HDM1-215ENST00000483021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.56■■■□□ 25e-7■■■■□ 20.1
R3HDM1-215ENST00000483021 TRIM26Q12899 539 aaPredicted RBP27.55■■■□□ 2
R3HDM1-215ENST00000483021 CARD10Q9BWT7 1032 aa27.55■■■□□ 2
R3HDM1-215ENST00000483021 TERF2IPQ9NYB0 399 aa27.54■■■□□ 2
R3HDM1-215ENST00000483021 CCDC7Q96M83 1385 aa27.53■■■□□ 2
R3HDM1-215ENST00000483021 NINLQ9Y2I6 1382 aa27.53■■■□□ 2
R3HDM1-215ENST00000483021 A0A1W2PP64 1363 aa27.52■■■□□ 2
R3HDM1-215ENST00000483021 SLC24A1O60721 1099 aa27.52■■■□□ 2
R3HDM1-215ENST00000483021 SLC12A5Q9H2X9 1139 aa27.52■■■□□ 2
R3HDM1-215ENST00000483021 NME9Q86XW9 330 aa27.51■■□□□ 1.99
R3HDM1-215ENST00000483021 BCL9O00512 1426 aa27.5■■□□□ 1.99
R3HDM1-215ENST00000483021 NBPF14Q5TI25 921 aa27.49■■□□□ 1.99
R3HDM1-215ENST00000483021 TESK2Q96S53 571 aa27.47■■□□□ 1.99
R3HDM1-215ENST00000483021 ERBB3P21860 1342 aa27.46■■□□□ 1.99
R3HDM1-215ENST00000483021 TNS2Q63HR2 1409 aa27.46■■□□□ 1.99
R3HDM1-215ENST00000483021 ST20-MTHFSA0A0A6YYL1 179 aa27.45■■□□□ 1.98
R3HDM1-215ENST00000483021 MARCH10Q8NA82 808 aaPredicted RBP27.45■■□□□ 1.98
R3HDM1-215ENST00000483021 BCL11BQ9C0K0 894 aaPredicted RBP27.45■■□□□ 1.98
R3HDM1-215ENST00000483021 FAM208AQ9UK61 1670 aaKnown RBP27.44■■□□□ 1.98
R3HDM1-215ENST00000483021 PLSCR1O15162 318 aa27.44■■□□□ 1.98
R3HDM1-215ENST00000483021 EXOC5O00471 708 aa27.43■■□□□ 1.98
R3HDM1-215ENST00000483021 NLRP2Q9NX02 1062 aa27.39■■□□□ 1.98
R3HDM1-215ENST00000483021 NHSQ6T4R5 1651 aa27.39■■□□□ 1.97
R3HDM1-215ENST00000483021 USP47Q96K76 1375 aa27.37■■□□□ 1.97
R3HDM1-215ENST00000483021 ANKRD24Q8TF21 1146 aa27.37■■□□□ 1.97
R3HDM1-215ENST00000483021 ANKRD36BQ8N2N9 1353 aa27.36■■□□□ 1.97
R3HDM1-215ENST00000483021 IL2RBP14784 551 aa27.35■■□□□ 1.97
R3HDM1-215ENST00000483021 TMF1P82094 1093 aa27.34■■□□□ 1.97
R3HDM1-215ENST00000483021 PTF1AQ7RTS3 328 aa27.34■■□□□ 1.97
R3HDM1-215ENST00000483021 COG3Q96JB2 828 aa27.34■■□□□ 1.97
R3HDM1-215ENST00000483021 IP6K1Q92551 441 aa27.33■■□□□ 1.97
R3HDM1-215ENST00000483021 CASZ1Q86V15 1759 aa27.3■■□□□ 1.96
R3HDM1-215ENST00000483021 KIF20BQ96Q89 1820 aa27.29■■□□□ 1.96
R3HDM1-215ENST00000483021 CDCA8Q53HL2 280 aa27.28■■□□□ 1.96
R3HDM1-215ENST00000483021 SPON1Q9HCB6 807 aa27.28■■□□□ 1.96
R3HDM1-215ENST00000483021 ANO8Q9HCE9 1232 aaPredicted RBP27.27■■□□□ 1.96
R3HDM1-215ENST00000483021 BTAF1O14981 1849 aa27.27■■□□□ 1.96
R3HDM1-215ENST00000483021 KAT6BQ8WYB5 2073 aa27.26■■□□□ 1.95
R3HDM1-215ENST00000483021 MAP3K19Q56UN5 1328 aa27.26■■□□□ 1.95
R3HDM1-215ENST00000483021 PROM2Q8N271 834 aa27.26■■□□□ 1.95
R3HDM1-215ENST00000483021 TIMELESSQ9UNS1 1208 aa27.26■■□□□ 1.95
R3HDM1-215ENST00000483021 RTL1A6NKG5 1358 aa27.25■■□□□ 1.95
R3HDM1-215ENST00000483021 KCNQ2O43526 872 aa27.25■■□□□ 1.95
R3HDM1-215ENST00000483021 TXNRD1Q16881 649 aa27.25■■□□□ 1.95
R3HDM1-215ENST00000483021 AMPHP49418 695 aa27.24■■□□□ 1.95
R3HDM1-215ENST00000483021 RGPD2P0DJD1 1756 aa27.24■■□□□ 1.95
R3HDM1-215ENST00000483021 CLSPNQ9HAW4 1339 aa27.23■■□□□ 1.95
R3HDM1-215ENST00000483021 HOXC9P31274 260 aa27.23■■□□□ 1.95
R3HDM1-215ENST00000483021 LTV1Q96GA3 475 aaPredicted RBP27.23■■□□□ 1.95
R3HDM1-215ENST00000483021 MYOM1P52179 1685 aa27.22■■□□□ 1.95
R3HDM1-215ENST00000483021 ACSBG1Q96GR2 724 aa27.22■■□□□ 1.95
R3HDM1-215ENST00000483021 PPP1R1BQ9UD71 204 aaPredicted RBP27.22■■□□□ 1.95
R3HDM1-215ENST00000483021 STK32BQ9NY57 414 aa27.21■■□□□ 1.95
R3HDM1-215ENST00000483021 FYB1O15117 783 aa27.19■■□□□ 1.94
R3HDM1-215ENST00000483021 PAPPAQ13219 1627 aa27.18■■□□□ 1.94
R3HDM1-215ENST00000483021 SHANK3Q9BYB0 1731 aa27.18■■□□□ 1.94
R3HDM1-215ENST00000483021 SMG6Q86US8 1419 aaKnown RBP27.17■■□□□ 1.94
R3HDM1-215ENST00000483021 GGNBP2Q9H3C7 697 aa27.17■■□□□ 1.94
R3HDM1-215ENST00000483021 FBLN1P23142 703 aa27.16■■□□□ 1.94
R3HDM1-215ENST00000483021 SLC15A2Q16348 729 aa27.16■■□□□ 1.94
R3HDM1-215ENST00000483021 DOT1LQ8TEK3 1739 aa27.16■■□□□ 1.94
R3HDM1-215ENST00000483021 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
R3HDM1-215ENST00000483021 DDX54Q8TDD1 881 aaKnown RBP27.14■■□□□ 1.94
R3HDM1-215ENST00000483021 KIF24Q5T7B8 1368 aa27.13■■□□□ 1.93
R3HDM1-215ENST00000483021 MEGF6O75095 1541 aa27.12■■□□□ 1.93
R3HDM1-215ENST00000483021 PDGFDQ9GZP0 370 aaPredicted RBP27.11■■□□□ 1.93
R3HDM1-215ENST00000483021 FLT4P35916 1363 aa27.1■■□□□ 1.93
R3HDM1-215ENST00000483021 NSD3Q9BZ95 1437 aa27.1■■□□□ 1.93
R3HDM1-215ENST00000483021 CGNL1Q0VF96 1302 aa27.1■■□□□ 1.93
R3HDM1-215ENST00000483021 INSRP06213 1382 aa27.09■■□□□ 1.93
R3HDM1-215ENST00000483021 ZBTB7AO95365 584 aa27.09■■□□□ 1.93
R3HDM1-215ENST00000483021 ZCRB1Q8TBF4 217 aaKnown RBP27.09■■□□□ 1.93
R3HDM1-215ENST00000483021 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms