RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 EXOC6BQ9Y2D4 811 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
CALD1-220ENST00000482470 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
CALD1-220ENST00000482470 EIF4A2Q14240 407 aaKnown RBP11.28□□□□□ -0.6
CALD1-220ENST00000482470 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
CALD1-220ENST00000482470 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
CALD1-220ENST00000482470 ZBTB40Q9NUA8 1239 aa11.28□□□□□ -0.6
CALD1-220ENST00000482470 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.6
CALD1-220ENST00000482470 ST18O60284 1047 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.61
CALD1-220ENST00000482470 SYNMO15061 1565 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 TRAK2O60296 914 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
CALD1-220ENST00000482470 IL16Q14005 1332 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 C16orf71Q8IYS4 520 aaPredicted RBP11.27□□□□□ -0.61
CALD1-220ENST00000482470 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
CALD1-220ENST00000482470 ZMYND15Q9H091 742 aa11.27□□□□□ -0.61
CALD1-220ENST00000482470 TTC21BQ7Z4L5 1316 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
CALD1-220ENST00000482470 MRPL50Q8N5N7 158 aaKnown RBP11.26□□□□□ -0.61
CALD1-220ENST00000482470 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 MADDQ8WXG6 1647 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 MYOM2P54296 1465 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
CALD1-220ENST00000482470 HDGFL1Q5TGJ6 251 aa11.26□□□□□ -0.61
CALD1-220ENST00000482470 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 IL13P35225 146 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
CALD1-220ENST00000482470 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
CALD1-220ENST00000482470 MAP4K4O95819 1239 aaPredicted RBP11.25□□□□□ -0.61
CALD1-220ENST00000482470 MEIS3Q99687 375 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
CALD1-220ENST00000482470 TET3O43151 1660 aa11.25□□□□□ -0.61
CALD1-220ENST00000482470 UBTFL1P0CB47 393 aaPredicted RBP11.24□□□□□ -0.61
CALD1-220ENST00000482470 NUCB1Q02818 461 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 CCDC30Q5VVM6 783 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 REC8O95072 547 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 MCM4P33991 863 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 CHMP3Q9Y3E7 222 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 MLH3Q9UHC1 1453 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 GNAI2P04899 355 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 EFCAB6Q5THR3 1501 aa11.24□□□□□ -0.61
CALD1-220ENST00000482470 NAP1L2Q9ULW6 460 aaPredicted RBP11.23□□□□□ -0.61
CALD1-220ENST00000482470 TNRQ92752 1358 aa11.23□□□□□ -0.61
CALD1-220ENST00000482470 SMC5Q8IY18 1101 aa11.23□□□□□ -0.61
CALD1-220ENST00000482470 MAP3K4Q9Y6R4 1608 aa11.23□□□□□ -0.61
CALD1-220ENST00000482470 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
CALD1-220ENST00000482470 POLR1AO95602 1720 aaPredicted RBP11.22□□□□□ -0.61
CALD1-220ENST00000482470 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 ZBTB7BO15156 539 aaPredicted RBP11.22□□□□□ -0.61
CALD1-220ENST00000482470 PTMAP06454 111 aaKnown RBP11.22□□□□□ -0.61
CALD1-220ENST00000482470 NEK4P51957 841 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 MCTP1Q6DN14 999 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 ANXA1P04083 346 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 FGD1P98174 961 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 KIF1BO60333 1816 aa11.22□□□□□ -0.61
CALD1-220ENST00000482470 RNF17Q9BXT8 1623 aaKnown RBP11.21□□□□□ -0.61
CALD1-220ENST00000482470 METP08581 1390 aa11.21□□□□□ -0.61
CALD1-220ENST00000482470 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
CALD1-220ENST00000482470 MTHFSDQ2M296 383 aaKnown RBP11.21□□□□□ -0.61
CALD1-220ENST00000482470 LTKP29376 864 aa11.21□□□□□ -0.61
CALD1-220ENST00000482470 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.61
CALD1-220ENST00000482470 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.62
CALD1-220ENST00000482470 GNAI3P08754 354 aa11.21□□□□□ -0.62
CALD1-220ENST00000482470 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.62
CALD1-220ENST00000482470 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
CALD1-220ENST00000482470 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
CALD1-220ENST00000482470 OTUD7AQ8TE49 926 aaPredicted RBP11.2□□□□□ -0.62
CALD1-220ENST00000482470 ABCC3O15438 1527 aa11.2□□□□□ -0.62
CALD1-220ENST00000482470 K7ELQ4 463 aaPredicted RBP11.2□□□□□ -0.62
CALD1-220ENST00000482470 MAP3K19Q56UN5 1328 aa11.2□□□□□ -0.62
CALD1-220ENST00000482470 NEO1Q92859 1461 aa11.2□□□□□ -0.62
CALD1-220ENST00000482470 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
CALD1-220ENST00000482470 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
CALD1-220ENST00000482470 G2E3Q7L622 706 aa11.19□□□□□ -0.62
CALD1-220ENST00000482470 SHROOM2Q13796 1616 aa11.19□□□□□ -0.62
CALD1-220ENST00000482470 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
CALD1-220ENST00000482470 MPRIPQ6WCQ1 1025 aa11.19□□□□□ -0.62
CALD1-220ENST00000482470 EYA1Q99502 592 aa11.19□□□□□ -0.62
CALD1-220ENST00000482470 ARHGAP45Q92619 1136 aa11.18□□□□□ -0.62
CALD1-220ENST00000482470 LRRCC1Q9C099 1032 aa11.18□□□□□ -0.62
CALD1-220ENST00000482470 FLIIQ13045 1269 aa11.18□□□□□ -0.62
CALD1-220ENST00000482470 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
CALD1-220ENST00000482470 SRGAP3O43295 1099 aa11.18□□□□□ -0.62
CALD1-220ENST00000482470 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
CALD1-220ENST00000482470 KCNA6P17658 529 aa11.17□□□□□ -0.62
CALD1-220ENST00000482470 PROSER2Q86WR7 435 aaPredicted RBP11.17□□□□□ -0.62
CALD1-220ENST00000482470 ANKLE2Q86XL3 938 aa11.17□□□□□ -0.62
CALD1-220ENST00000482470 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
CALD1-220ENST00000482470 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms