RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 SND1Q7KZF4 910 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEC22A-207ENST00000481965 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
SEC22A-207ENST00000481965 ZPR1O75312 459 aa11.24□□□□□ -0.61
SEC22A-207ENST00000481965 ADH1BP00325 375 aa11.24□□□□□ -0.61
SEC22A-207ENST00000481965 MCCD1P59942 119 aaPredicted RBP11.24□□□□□ -0.61
SEC22A-207ENST00000481965 TXNDC2Q86VQ3 553 aa11.24□□□□□ -0.61
SEC22A-207ENST00000481965 RASA1P20936 1047 aa11.23□□□□□ -0.61
SEC22A-207ENST00000481965 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
SEC22A-207ENST00000481965 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
SEC22A-207ENST00000481965 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
SEC22A-207ENST00000481965 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
SEC22A-207ENST00000481965 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.61
SEC22A-207ENST00000481965 SSFA2P28290 1259 aa11.21□□□□□ -0.61
SEC22A-207ENST00000481965 CLDN10P78369 228 aa11.21□□□□□ -0.61
SEC22A-207ENST00000481965 MTRQ99707 1265 aa11.21□□□□□ -0.61
SEC22A-207ENST00000481965 POTEMA6NI47 508 aa11.2□□□□□ -0.62
SEC22A-207ENST00000481965 LZTS3O60299 673 aaPredicted RBP11.2□□□□□ -0.62
SEC22A-207ENST00000481965 DKK1O94907 266 aa11.2□□□□□ -0.62
SEC22A-207ENST00000481965 CCDC27Q2M243 656 aa11.2□□□□□ -0.62
SEC22A-207ENST00000481965 LARP1Q6PKG0 1096 aaKnown RBP11.2□□□□□ -0.62
SEC22A-207ENST00000481965 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
SEC22A-207ENST00000481965 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
SEC22A-207ENST00000481965 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
SEC22A-207ENST00000481965 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
SEC22A-207ENST00000481965 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
SEC22A-207ENST00000481965 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
SEC22A-207ENST00000481965 ZNF516Q92618 1163 aa11.19□□□□□ -0.62
SEC22A-207ENST00000481965 CLP1Q92989 425 aaKnown RBP11.19□□□□□ -0.62
SEC22A-207ENST00000481965 C4orf48Q5BLP8 95 aa11.18□□□□□ -0.62
SEC22A-207ENST00000481965 ZBTB33Q86T24 672 aa11.18□□□□□ -0.62
SEC22A-207ENST00000481965 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
SEC22A-207ENST00000481965 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
SEC22A-207ENST00000481965 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
SEC22A-207ENST00000481965 EML3Q32P44 896 aa11.17□□□□□ -0.62
SEC22A-207ENST00000481965 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
SEC22A-207ENST00000481965 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
SEC22A-207ENST00000481965 KIAA1024Q9UPX6 916 aa11.17□□□□□ -0.62
SEC22A-207ENST00000481965 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
SEC22A-207ENST00000481965 DPYDQ12882 1025 aa11.16□□□□□ -0.62
SEC22A-207ENST00000481965 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
SEC22A-207ENST00000481965 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
SEC22A-207ENST00000481965 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
SEC22A-207ENST00000481965 GIGYF1O75420 1035 aaPredicted RBP11.15□□□□□ -0.62
SEC22A-207ENST00000481965 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
SEC22A-207ENST00000481965 DZIP3Q86Y13 1208 aaKnown RBP11.15□□□□□ -0.62
SEC22A-207ENST00000481965 BAP1Q92560 729 aa11.15□□□□□ -0.62
SEC22A-207ENST00000481965 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
SEC22A-207ENST00000481965 ZNF594Q96JF6 807 aaPredicted RBP11.15□□□□□ -0.62
SEC22A-207ENST00000481965 SLC6A16Q9GZN6 736 aa11.15□□□□□ -0.62
SEC22A-207ENST00000481965 SCNN1AP37088 669 aa11.14□□□□□ -0.63
SEC22A-207ENST00000481965 RBM25P49756 843 aaKnown RBP11.14□□□□□ -0.63
SEC22A-207ENST00000481965 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
SEC22A-207ENST00000481965 LINC01559Q495D7 138 aa11.13□□□□□ -0.63
SEC22A-207ENST00000481965 CCER1Q8TC90 406 aaPredicted RBP11.13□□□□□ -0.63
SEC22A-207ENST00000481965 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
SEC22A-207ENST00000481965 DOLKQ9UPQ8 538 aa11.13□□□□□ -0.63
SEC22A-207ENST00000481965 ZNF511Q8NB15 262 aa11.12□□□□□ -0.63
SEC22A-207ENST00000481965 IL21Q9HBE4 155 aa11.12□□□□□ -0.63
SEC22A-207ENST00000481965 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
SEC22A-207ENST00000481965 S1PR4O95977 384 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 ATP2B4P23634 1241 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 SWI5Q1ZZU3 235 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 SIX5Q8N196 739 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
SEC22A-207ENST00000481965 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
SEC22A-207ENST00000481965 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
SEC22A-207ENST00000481965 BPHLQ86WA6 291 aaPredicted RBP11.1□□□□□ -0.63
SEC22A-207ENST00000481965 C1QTNF2Q9BXJ5 285 aa11.1□□□□□ -0.63
SEC22A-207ENST00000481965 FCF1Q9Y324 198 aaKnown RBP11.1□□□□□ -0.63
SEC22A-207ENST00000481965 SERPINB4P48594 390 aa11.09□□□□□ -0.63
SEC22A-207ENST00000481965 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
SEC22A-207ENST00000481965 AMOTL2Q9Y2J4 779 aa11.09□□□□□ -0.63
SEC22A-207ENST00000481965 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
SEC22A-207ENST00000481965 ESPNB1AK53 854 aa11.08□□□□□ -0.64
SEC22A-207ENST00000481965 GTF2IP78347 998 aa11.08□□□□□ -0.64
SEC22A-207ENST00000481965 PTPN5P54829 565 aa11.07□□□□□ -0.64
SEC22A-207ENST00000481965 OCLNQ16625 522 aa11.07□□□□□ -0.64
SEC22A-207ENST00000481965 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
SEC22A-207ENST00000481965 SH3BP2P78314 561 aa11.06□□□□□ -0.64
SEC22A-207ENST00000481965 AGERQ15109 404 aa11.06□□□□□ -0.64
SEC22A-207ENST00000481965 NOM1Q5C9Z4 860 aaKnown RBP11.06□□□□□ -0.64
SEC22A-207ENST00000481965 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
SEC22A-207ENST00000481965 CCDC102BQ68D86 513 aa11.05□□□□□ -0.64
SEC22A-207ENST00000481965 DNAJC14Q6Y2X3 702 aaPredicted RBP11.05□□□□□ -0.64
SEC22A-207ENST00000481965 C1orf216Q8TAB5 229 aa11.05□□□□□ -0.64
SEC22A-207ENST00000481965 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
SEC22A-207ENST00000481965 PRMT3O60678 531 aa11.04□□□□□ -0.64
SEC22A-207ENST00000481965 SEC13P55735 322 aa11.04□□□□□ -0.64
SEC22A-207ENST00000481965 TRMT44Q8IYL2 757 aaKnown RBP11.04□□□□□ -0.64
SEC22A-207ENST00000481965 TPCN2Q8NHX9 752 aa11.04□□□□□ -0.64
SEC22A-207ENST00000481965 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
SEC22A-207ENST00000481965 PRIMPOLQ96LW4 560 aa11.03□□□□□ -0.64
SEC22A-207ENST00000481965 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
SEC22A-207ENST00000481965 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
SEC22A-207ENST00000481965 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
SEC22A-207ENST00000481965 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.65
SEC22A-207ENST00000481965 PPEF1O14829 653 aaPredicted RBP11.01□□□□□ -0.65
SEC22A-207ENST00000481965 LGR5O75473 907 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms