RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CHD4Q14839 1912 aa21.92■■□□□ 1.1
HDAC6-224ENST00000481929 AATKQ6ZMQ8 1374 aa21.91■■□□□ 1.1
HDAC6-224ENST00000481929 UTRNP46939 3433 aa21.9■■□□□ 1.1
HDAC6-224ENST00000481929 BCL9O00512 1426 aa21.9■■□□□ 1.1
HDAC6-224ENST00000481929 SLC15A2Q16348 729 aa21.9■■□□□ 1.1
HDAC6-224ENST00000481929 TXNRD1Q16881 649 aa21.9■■□□□ 1.1
HDAC6-224ENST00000481929 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-224ENST00000481929 MTFR1LQ9H019 292 aa21.9■■□□□ 1.1
HDAC6-224ENST00000481929 BRD4O60885 1362 aaPredicted RBP21.89■■□□□ 1.1
HDAC6-224ENST00000481929 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
HDAC6-224ENST00000481929 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.09
HDAC6-224ENST00000481929 AKAP12Q02952 1782 aa21.88■■□□□ 1.09
HDAC6-224ENST00000481929 WNK3Q9BYP7 1800 aa21.87■■□□□ 1.09
HDAC6-224ENST00000481929 IFFO2Q5TF58 517 aa21.87■■□□□ 1.09
HDAC6-224ENST00000481929 WDR17Q8IZU2 1322 aa21.86■■□□□ 1.09
HDAC6-224ENST00000481929 NLRP6P59044 892 aa21.86■■□□□ 1.09
HDAC6-224ENST00000481929 SRPK2P78362 688 aaKnown RBP21.86■■□□□ 1.09
HDAC6-224ENST00000481929 SLIT3O75094 1523 aa21.85■■□□□ 1.09
HDAC6-224ENST00000481929 SGIP1Q9BQI5 828 aa21.85■■□□□ 1.09
HDAC6-224ENST00000481929 ARXQ96QS3 562 aa21.83■■□□□ 1.09
HDAC6-224ENST00000481929 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.08
HDAC6-224ENST00000481929 USP6P35125 1406 aa21.82■■□□□ 1.08
HDAC6-224ENST00000481929 MAP3K5Q99683 1374 aa21.82■■□□□ 1.08
HDAC6-224ENST00000481929 COL18A1P39060 1754 aa21.82■■□□□ 1.08
HDAC6-224ENST00000481929 AXIN2Q9Y2T1 843 aa21.81■■□□□ 1.08
HDAC6-224ENST00000481929 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
HDAC6-224ENST00000481929 EXOC5O00471 708 aa21.8■■□□□ 1.08
HDAC6-224ENST00000481929 GIGYF1O75420 1035 aaPredicted RBP21.8■■□□□ 1.08
HDAC6-224ENST00000481929 CABP2Q9NPB3 220 aa21.8■■□□□ 1.08
HDAC6-224ENST00000481929 CSB-PGBD3P0DP91 1061 aa21.79■■□□□ 1.08
HDAC6-224ENST00000481929 GPR162Q16538 588 aa21.79■■□□□ 1.08
HDAC6-224ENST00000481929 CARD10Q9BWT7 1032 aa21.79■■□□□ 1.08
HDAC6-224ENST00000481929 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
HDAC6-224ENST00000481929 TNS2Q63HR2 1409 aa21.76■■□□□ 1.07
HDAC6-224ENST00000481929 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
HDAC6-224ENST00000481929 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-224ENST00000481929 PIK3C2AO00443 1686 aa21.75■■□□□ 1.07
HDAC6-224ENST00000481929 ARHGEF25Q86VW2 580 aa21.75■■□□□ 1.07
HDAC6-224ENST00000481929 NHSQ6T4R5 1651 aa21.75■■□□□ 1.07
HDAC6-224ENST00000481929 CCDC7Q96M83 1385 aa21.74■■□□□ 1.07
HDAC6-224ENST00000481929 KCNH5Q8NCM2 988 aa21.74■■□□□ 1.07
HDAC6-224ENST00000481929 PAPPAQ13219 1627 aa21.73■■□□□ 1.07
HDAC6-224ENST00000481929 QRICH2Q9H0J4 1663 aa21.73■■□□□ 1.07
HDAC6-224ENST00000481929 ACSBG1Q96GR2 724 aa21.72■■□□□ 1.07
HDAC6-224ENST00000481929 RGPD5Q99666 1765 aa21.71■■□□□ 1.07
HDAC6-224ENST00000481929 SOX12O15370 315 aa21.71■■□□□ 1.07
HDAC6-224ENST00000481929 NBPF1Q3BBV0 1214 aa21.71■■□□□ 1.07
HDAC6-224ENST00000481929 KLHL34Q8N239 644 aa21.71■■□□□ 1.07
HDAC6-224ENST00000481929 TRPM1Q7Z4N2 1603 aa21.7■■□□□ 1.06
HDAC6-224ENST00000481929 PELP1Q8IZL8 1130 aaKnown RBP21.7■■□□□ 1.06
HDAC6-224ENST00000481929 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
HDAC6-224ENST00000481929 ABCC6O95255 1503 aa21.69■■□□□ 1.06
HDAC6-224ENST00000481929 POLD1P28340 1107 aa21.68■■□□□ 1.06
HDAC6-224ENST00000481929 SLC16A10Q8TF71 515 aa21.67■■□□□ 1.06
HDAC6-224ENST00000481929 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
HDAC6-224ENST00000481929 BTAF1O14981 1849 aa21.66■■□□□ 1.06
HDAC6-224ENST00000481929 CEP350Q5VT06 3117 aa21.66■■□□□ 1.06
HDAC6-224ENST00000481929 NFAT5O94916 1531 aa21.65■■□□□ 1.06
HDAC6-224ENST00000481929 SHANK3Q9BYB0 1731 aa21.64■■□□□ 1.06
HDAC6-224ENST00000481929 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.05
HDAC6-224ENST00000481929 LRRC4BQ9NT99 713 aa21.64■■□□□ 1.05
HDAC6-224ENST00000481929 TTC21AQ8NDW8 1320 aa21.63■■□□□ 1.05
HDAC6-224ENST00000481929 EVC2Q86UK5 1308 aa21.62■■□□□ 1.05
HDAC6-224ENST00000481929 IL2RBP14784 551 aa21.61■■□□□ 1.05
HDAC6-224ENST00000481929 AKT1S1Q96B36 256 aa21.61■■□□□ 1.05
HDAC6-224ENST00000481929 NLRP2Q9NX02 1062 aa21.61■■□□□ 1.05
HDAC6-224ENST00000481929 QSER1Q2KHR3 1735 aa21.6■■□□□ 1.05
HDAC6-224ENST00000481929 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
HDAC6-224ENST00000481929 NLGN2Q8NFZ4 835 aa21.6■■□□□ 1.05
HDAC6-224ENST00000481929 ERBB3P21860 1342 aa21.59■■□□□ 1.05
HDAC6-224ENST00000481929 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
HDAC6-224ENST00000481929 SLC27A3Q5K4L6 730 aa21.59■■□□□ 1.05
HDAC6-224ENST00000481929 COL24A1Q17RW2 1714 aa21.58■■□□□ 1.05
HDAC6-224ENST00000481929 GRIN3BO60391 1043 aa21.58■■□□□ 1.05
HDAC6-224ENST00000481929 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
HDAC6-224ENST00000481929 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
HDAC6-224ENST00000481929 KTN1Q86UP2 1357 aaKnown RBP21.55■■□□□ 1.04
HDAC6-224ENST00000481929 YBX3P16989 372 aaKnown RBP eCLIP21.54■■□□□ 1.04
HDAC6-224ENST00000481929 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
HDAC6-224ENST00000481929 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
HDAC6-224ENST00000481929 TUBGCP6Q96RT7 1819 aa21.52■■□□□ 1.04
HDAC6-224ENST00000481929 USP31Q70CQ4 1352 aa21.5■■□□□ 1.03
HDAC6-224ENST00000481929 KCNQ4P56696 695 aa21.49■■□□□ 1.03
HDAC6-224ENST00000481929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.49■■□□□ 1.03
HDAC6-224ENST00000481929 DDX54Q8TDD1 881 aaKnown RBP21.49■■□□□ 1.03
HDAC6-224ENST00000481929 GPBP1L1Q9HC44 474 aaPredicted RBP21.49■■□□□ 1.03
HDAC6-224ENST00000481929 HSPA6P17066 643 aa21.48■■□□□ 1.03
HDAC6-224ENST00000481929 SYTL4Q96C24 671 aaPredicted RBP21.48■■□□□ 1.03
HDAC6-224ENST00000481929 LTN1O94822 1766 aa21.48■■□□□ 1.03
HDAC6-224ENST00000481929 MON2Q7Z3U7 1717 aa21.47■■□□□ 1.03
HDAC6-224ENST00000481929 MSH5O43196 834 aa21.47■■□□□ 1.03
HDAC6-224ENST00000481929 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
HDAC6-224ENST00000481929 NME9Q86XW9 330 aa21.45■■□□□ 1.02
HDAC6-224ENST00000481929 ANKRD36BQ8N2N9 1353 aa21.45■■□□□ 1.02
HDAC6-224ENST00000481929 PRIM1P49642 420 aaKnown RBP21.44■■□□□ 1.02
HDAC6-224ENST00000481929 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-224ENST00000481929 LY75O60449 1722 aa21.43■■□□□ 1.02
HDAC6-224ENST00000481929 ADCY9O60503 1353 aa21.42■■□□□ 1.02
HDAC6-224ENST00000481929 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
HDAC6-224ENST00000481929 NSD2O96028 1365 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms