RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 NLRP6P59044 892 aa25.26■■□□□ 1.63
RXRB-203ENST00000481441 PROM2Q8N271 834 aa25.26■■□□□ 1.63
RXRB-203ENST00000481441 AKAP12Q02952 1782 aa25.26■■□□□ 1.63
RXRB-203ENST00000481441 TOM1L2Q6ZVM7 507 aa25.25■■□□□ 1.63
RXRB-203ENST00000481441 BCL9O00512 1426 aa25.24■■□□□ 1.63
RXRB-203ENST00000481441 CENPJQ9HC77 1338 aaPredicted RBP25.24■■□□□ 1.63
RXRB-203ENST00000481441 PIK3C2AO00443 1686 aa25.24■■□□□ 1.63
RXRB-203ENST00000481441 MYOM1P52179 1685 aa25.24■■□□□ 1.63
RXRB-203ENST00000481441 QRICH2Q9H0J4 1663 aa25.23■■□□□ 1.63
RXRB-203ENST00000481441 MARCH10Q8NA82 808 aaPredicted RBP25.23■■□□□ 1.63
RXRB-203ENST00000481441 WDR17Q8IZU2 1322 aa25.22■■□□□ 1.63
RXRB-203ENST00000481441 CABP1Q9NZU7 370 aa25.22■■□□□ 1.63
RXRB-203ENST00000481441 AXIN2Q9Y2T1 843 aa25.22■■□□□ 1.63
RXRB-203ENST00000481441 RGPD5Q99666 1765 aa25.21■■□□□ 1.63
RXRB-203ENST00000481441 ZBTB7AO95365 584 aa25.2■■□□□ 1.62
RXRB-203ENST00000481441 PTGER2P43116 358 aa25.2■■□□□ 1.62
RXRB-203ENST00000481441 CDCA7Q9BWT1 371 aaPredicted RBP25.2■■□□□ 1.62
RXRB-203ENST00000481441 CPSF1Q10570 1443 aaKnown RBP25.18■■□□□ 1.62
RXRB-203ENST00000481441 TXNRD1Q16881 649 aa25.15■■□□□ 1.62
RXRB-203ENST00000481441 ARHGEF25Q86VW2 580 aa25.15■■□□□ 1.62
RXRB-203ENST00000481441 ATF5Q9Y2D1 282 aaPredicted RBP25.15■■□□□ 1.62
RXRB-203ENST00000481441 CARD10Q9BWT7 1032 aa25.14■■□□□ 1.62
RXRB-203ENST00000481441 STK32BQ9NY57 414 aa25.14■■□□□ 1.62
RXRB-203ENST00000481441 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
RXRB-203ENST00000481441 ZNF784Q8NCA9 323 aaPredicted RBP25.13■■□□□ 1.61
RXRB-203ENST00000481441 SYT17Q9BSW7 474 aa25.12■■□□□ 1.61
RXRB-203ENST00000481441 KCNH5Q8NCM2 988 aa25.11■■□□□ 1.61
RXRB-203ENST00000481441 SGIP1Q9BQI5 828 aa25.11■■□□□ 1.61
RXRB-203ENST00000481441 FHDC1Q9C0D6 1143 aaPredicted RBP25.11■■□□□ 1.61
RXRB-203ENST00000481441 CHD4Q14839 1912 aa25.11■■□□□ 1.61
RXRB-203ENST00000481441 TRPM1Q7Z4N2 1603 aa25.1■■□□□ 1.61
RXRB-203ENST00000481441 EXOC5O00471 708 aa25.1■■□□□ 1.61
RXRB-203ENST00000481441 TTC21BQ7Z4L5 1316 aa25.09■■□□□ 1.61
RXRB-203ENST00000481441 NHSQ6T4R5 1651 aa25.09■■□□□ 1.61
RXRB-203ENST00000481441 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
RXRB-203ENST00000481441 MTFR1LQ9H019 292 aa25.09■■□□□ 1.61
RXRB-203ENST00000481441 NFAT5O94916 1531 aa25.08■■□□□ 1.61
RXRB-203ENST00000481441 EVC2Q86UK5 1308 aa25.07■■□□□ 1.6
RXRB-203ENST00000481441 TNS2Q63HR2 1409 aa25.07■■□□□ 1.6
RXRB-203ENST00000481441 SOX12O15370 315 aa25.07■■□□□ 1.6
RXRB-203ENST00000481441 ZNF692Q9BU19 519 aaPredicted RBP25.07■■□□□ 1.6
RXRB-203ENST00000481441 CCDC7Q96M83 1385 aa25.06■■□□□ 1.6
RXRB-203ENST00000481441 ABCC6O95255 1503 aa25.05■■□□□ 1.6
RXRB-203ENST00000481441 PAPPAQ13219 1627 aa25.05■■□□□ 1.6
RXRB-203ENST00000481441 TTC21AQ8NDW8 1320 aa25.05■■□□□ 1.6
RXRB-203ENST00000481441 UTRNP46939 3433 aa25.04■■□□□ 1.6
RXRB-203ENST00000481441 BTAF1O14981 1849 aa25■■□□□ 1.59
RXRB-203ENST00000481441 ARXQ96QS3 562 aa25■■□□□ 1.59
RXRB-203ENST00000481441 MAP3K5Q99683 1374 aa24.99■■□□□ 1.59
RXRB-203ENST00000481441 ACSBG1Q96GR2 724 aa24.99■■□□□ 1.59
RXRB-203ENST00000481441 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
RXRB-203ENST00000481441 KTN1Q86UP2 1357 aaKnown RBP24.97■■□□□ 1.59
RXRB-203ENST00000481441 USP54Q70EL1 1684 aa24.96■■□□□ 1.59
RXRB-203ENST00000481441 L3MBTL2Q969R5 705 aa24.96■■□□□ 1.59
RXRB-203ENST00000481441 KAT6BQ8WYB5 2073 aa24.96■■□□□ 1.59
RXRB-203ENST00000481441 ERBB3P21860 1342 aa24.95■■□□□ 1.59
RXRB-203ENST00000481441 C1QTNF8P60827 252 aa24.95■■□□□ 1.58
RXRB-203ENST00000481441 LTN1O94822 1766 aa24.95■■□□□ 1.58
RXRB-203ENST00000481441 ZNF827Q17R98 1081 aa24.94■■□□□ 1.58
RXRB-203ENST00000481441 SENP3-EIF4A1A0A087X0R7 540 aa24.93■■□□□ 1.58
RXRB-203ENST00000481441 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
RXRB-203ENST00000481441 IL2RBP14784 551 aa24.92■■□□□ 1.58
RXRB-203ENST00000481441 NLRP2Q9NX02 1062 aa24.92■■□□□ 1.58
RXRB-203ENST00000481441 QSER1Q2KHR3 1735 aa24.91■■□□□ 1.58
RXRB-203ENST00000481441 LRRC4BQ9NT99 713 aa24.91■■□□□ 1.58
RXRB-203ENST00000481441 COL24A1Q17RW2 1714 aa24.91■■□□□ 1.58
RXRB-203ENST00000481441 ROCK2O75116 1388 aaKnown RBP24.89■■□□□ 1.57
RXRB-203ENST00000481441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.88■■□□□ 1.57
RXRB-203ENST00000481441 AKT1S1Q96B36 256 aa24.87■■□□□ 1.57
RXRB-203ENST00000481441 GPR162Q16538 588 aa24.86■■□□□ 1.57
RXRB-203ENST00000481441 NME9Q86XW9 330 aa24.86■■□□□ 1.57
RXRB-203ENST00000481441 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
RXRB-203ENST00000481441 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
RXRB-203ENST00000481441 ANKRD24Q8TF21 1146 aa24.86■■□□□ 1.57
RXRB-203ENST00000481441 SLC16A10Q8TF71 515 aa24.86■■□□□ 1.57
RXRB-203ENST00000481441 TUBGCP6Q96RT7 1819 aa24.84■■□□□ 1.57
RXRB-203ENST00000481441 SLC27A3Q5K4L6 730 aa24.83■■□□□ 1.56
RXRB-203ENST00000481441 PNPLA7Q6ZV29 1317 aa24.82■■□□□ 1.56
RXRB-203ENST00000481441 POLD1P28340 1107 aa24.8■■□□□ 1.56
RXRB-203ENST00000481441 KLHL34Q8N239 644 aa24.79■■□□□ 1.56
RXRB-203ENST00000481441 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
RXRB-203ENST00000481441 FAM208AQ9UK61 1670 aaKnown RBP24.79■■□□□ 1.56
RXRB-203ENST00000481441 LY75O60449 1722 aa24.78■■□□□ 1.56
RXRB-203ENST00000481441 SHANK3Q9BYB0 1731 aa24.78■■□□□ 1.56
RXRB-203ENST00000481441 DDX54Q8TDD1 881 aaKnown RBP24.78■■□□□ 1.56
RXRB-203ENST00000481441 GIGYF1O75420 1035 aaPredicted RBP24.77■■□□□ 1.56
RXRB-203ENST00000481441 EDC4Q6P2E9 1401 aaKnown RBP24.76■■□□□ 1.55
RXRB-203ENST00000481441 NLGN2Q8NFZ4 835 aa24.76■■□□□ 1.55
RXRB-203ENST00000481441 DOT1LQ8TEK3 1739 aa24.76■■□□□ 1.55
RXRB-203ENST00000481441 KCNQ4P56696 695 aa24.75■■□□□ 1.55
RXRB-203ENST00000481441 PELP1Q8IZL8 1130 aaKnown RBP24.75■■□□□ 1.55
RXRB-203ENST00000481441 TFCP2L1Q9NZI6 479 aa24.75■■□□□ 1.55
RXRB-203ENST00000481441 HDGFL2Q7Z4V5 671 aaPredicted RBP24.74■■□□□ 1.55
RXRB-203ENST00000481441 TMC1Q8TDI8 760 aa24.74■■□□□ 1.55
RXRB-203ENST00000481441 IP6K1Q92551 441 aa24.74■■□□□ 1.55
RXRB-203ENST00000481441 SLC12A5Q9H2X9 1139 aa24.74■■□□□ 1.55
RXRB-203ENST00000481441 ANKRD36BQ8N2N9 1353 aa24.73■■□□□ 1.55
RXRB-203ENST00000481441 NSD2O96028 1365 aa24.73■■□□□ 1.55
RXRB-203ENST00000481441 PRIM1P49642 420 aaKnown RBP24.72■■□□□ 1.55
RXRB-203ENST00000481441 A0A1W2PP64 1363 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms