RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
GTF3C2-210ENST00000480989 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
GTF3C2-210ENST00000480989 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
GTF3C2-210ENST00000480989 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
GTF3C2-210ENST00000480989 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
GTF3C2-210ENST00000480989 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
GTF3C2-210ENST00000480989 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
GTF3C2-210ENST00000480989 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
GTF3C2-210ENST00000480989 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
GTF3C2-210ENST00000480989 PROM2Q8N271 834 aa13.46□□□□□ -0.25
GTF3C2-210ENST00000480989 MARCH10Q8NA82 808 aaPredicted RBP13.46□□□□□ -0.25
GTF3C2-210ENST00000480989 BCL9O00512 1426 aa13.45□□□□□ -0.26
GTF3C2-210ENST00000480989 LTN1O94822 1766 aa13.44□□□□□ -0.26
GTF3C2-210ENST00000480989 MYOM1P52179 1685 aa13.44□□□□□ -0.26
GTF3C2-210ENST00000480989 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
GTF3C2-210ENST00000480989 DDB1Q16531 1140 aa13.43□□□□□ -0.26
GTF3C2-210ENST00000480989 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
GTF3C2-210ENST00000480989 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
GTF3C2-210ENST00000480989 UTRNP46939 3433 aa13.42□□□□□ -0.26
GTF3C2-210ENST00000480989 PLSCR1O15162 318 aa13.42□□□□□ -0.26
GTF3C2-210ENST00000480989 SOX12O15370 315 aa13.42□□□□□ -0.26
GTF3C2-210ENST00000480989 NHSQ6T4R5 1651 aa13.42□□□□□ -0.26
GTF3C2-210ENST00000480989 ABCC6O95255 1503 aa13.42□□□□□ -0.26
GTF3C2-210ENST00000480989 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
GTF3C2-210ENST00000480989 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
GTF3C2-210ENST00000480989 TNS2Q63HR2 1409 aa13.4□□□□□ -0.26
GTF3C2-210ENST00000480989 KCNQ2O43526 872 aa13.4□□□□□ -0.26
GTF3C2-210ENST00000480989 NBPF14Q5TI25 921 aa13.4□□□□□ -0.26
GTF3C2-210ENST00000480989 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
GTF3C2-210ENST00000480989 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
GTF3C2-210ENST00000480989 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
GTF3C2-210ENST00000480989 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
GTF3C2-210ENST00000480989 USP31Q70CQ4 1352 aa13.39□□□□□ -0.27
GTF3C2-210ENST00000480989 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
GTF3C2-210ENST00000480989 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
GTF3C2-210ENST00000480989 BTAF1O14981 1849 aa13.38□□□□□ -0.27
GTF3C2-210ENST00000480989 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
GTF3C2-210ENST00000480989 PTGER2P43116 358 aa13.37□□□□□ -0.27
GTF3C2-210ENST00000480989 NME9Q86XW9 330 aa13.37□□□□□ -0.27
GTF3C2-210ENST00000480989 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
GTF3C2-210ENST00000480989 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
GTF3C2-210ENST00000480989 ERBB3P21860 1342 aa13.37□□□□□ -0.27
GTF3C2-210ENST00000480989 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
GTF3C2-210ENST00000480989 TXNRD1Q16881 649 aa13.36□□□□□ -0.27
GTF3C2-210ENST00000480989 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
GTF3C2-210ENST00000480989 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
GTF3C2-210ENST00000480989 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
GTF3C2-210ENST00000480989 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
GTF3C2-210ENST00000480989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
GTF3C2-210ENST00000480989 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
GTF3C2-210ENST00000480989 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
GTF3C2-210ENST00000480989 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
GTF3C2-210ENST00000480989 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
GTF3C2-210ENST00000480989 CSB-PGBD3P0DP91 1061 aa13.34□□□□□ -0.27
GTF3C2-210ENST00000480989 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
GTF3C2-210ENST00000480989 A0A1W2PP64 1363 aa13.33□□□□□ -0.27
GTF3C2-210ENST00000480989 YY1P25490 414 aa13.33□□□□□ -0.28
GTF3C2-210ENST00000480989 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
GTF3C2-210ENST00000480989 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
GTF3C2-210ENST00000480989 EXOC5O00471 708 aa13.32□□□□□ -0.28
GTF3C2-210ENST00000480989 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
GTF3C2-210ENST00000480989 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
GTF3C2-210ENST00000480989 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
GTF3C2-210ENST00000480989 EDC4Q6P2E9 1401 aaKnown RBP13.31□□□□□ -0.28
GTF3C2-210ENST00000480989 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
GTF3C2-210ENST00000480989 DOT1LQ8TEK3 1739 aa13.3□□□□□ -0.28
GTF3C2-210ENST00000480989 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
GTF3C2-210ENST00000480989 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
GTF3C2-210ENST00000480989 QSER1Q2KHR3 1735 aa13.3□□□□□ -0.28
GTF3C2-210ENST00000480989 FBLN1P23142 703 aa13.29□□□□□ -0.28
GTF3C2-210ENST00000480989 ANKRD24Q8TF21 1146 aa13.29□□□□□ -0.28
GTF3C2-210ENST00000480989 TESK2Q96S53 571 aa13.29□□□□□ -0.28
GTF3C2-210ENST00000480989 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
GTF3C2-210ENST00000480989 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
GTF3C2-210ENST00000480989 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
GTF3C2-210ENST00000480989 KAT6BQ8WYB5 2073 aa13.28□□□□□ -0.28
GTF3C2-210ENST00000480989 IL2RBP14784 551 aa13.28□□□□□ -0.28
GTF3C2-210ENST00000480989 STK32BQ9NY57 414 aa13.28□□□□□ -0.28
GTF3C2-210ENST00000480989 LY75O60449 1722 aa13.27□□□□□ -0.28
GTF3C2-210ENST00000480989 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
GTF3C2-210ENST00000480989 FHDC1Q9C0D6 1143 aaPredicted RBP13.27□□□□□ -0.29
GTF3C2-210ENST00000480989 NSD2O96028 1365 aa13.27□□□□□ -0.29
GTF3C2-210ENST00000480989 MEGF6O75095 1541 aa13.26□□□□□ -0.29
GTF3C2-210ENST00000480989 SYT17Q9BSW7 474 aa13.26□□□□□ -0.29
GTF3C2-210ENST00000480989 CHD4Q14839 1912 aa13.25□□□□□ -0.29
GTF3C2-210ENST00000480989 MTFR1LQ9H019 292 aa13.25□□□□□ -0.29
GTF3C2-210ENST00000480989 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
GTF3C2-210ENST00000480989 KCNQ4P56696 695 aa13.24□□□□□ -0.29
GTF3C2-210ENST00000480989 IP6K1Q92551 441 aa13.24□□□□□ -0.29
GTF3C2-210ENST00000480989 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
GTF3C2-210ENST00000480989 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
GTF3C2-210ENST00000480989 HOXC9P31274 260 aa13.22□□□□□ -0.29
GTF3C2-210ENST00000480989 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-210ENST00000480989 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
GTF3C2-210ENST00000480989 MAP3K5Q99683 1374 aa13.21□□□□□ -0.29
GTF3C2-210ENST00000480989 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
GTF3C2-210ENST00000480989 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.29
GTF3C2-210ENST00000480989 ZNF784Q8NCA9 323 aaPredicted RBP13.21□□□□□ -0.29
GTF3C2-210ENST00000480989 TOGARAM1Q9Y4F4 1720 aa13.21□□□□□ -0.3
GTF3C2-210ENST00000480989 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms