RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 USP54Q70EL1 1684 aa12.77□□□□□ -0.37
VCP-206ENST00000480327 PTF1AQ7RTS3 328 aa12.76□□□□□ -0.37
VCP-206ENST00000480327 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
VCP-206ENST00000480327 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
VCP-206ENST00000480327 NFAT5O94916 1531 aa12.76□□□□□ -0.37
VCP-206ENST00000480327 LTN1O94822 1766 aa12.74□□□□□ -0.37
VCP-206ENST00000480327 OVOS2A0A0G2JMS6 1433 aa12.74□□□□□ -0.37
VCP-206ENST00000480327 OVOS2A0A0J9YW53 1432 aa12.74□□□□□ -0.37
VCP-206ENST00000480327 OVOS2Q6IE36 1432 aa12.74□□□□□ -0.37
VCP-206ENST00000480327 NLRP6P59044 892 aa12.74□□□□□ -0.37
VCP-206ENST00000480327 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
VCP-206ENST00000480327 USP47Q96K76 1375 aa12.73□□□□□ -0.37
VCP-206ENST00000480327 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
VCP-206ENST00000480327 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
VCP-206ENST00000480327 TTC21BQ7Z4L5 1316 aa12.71□□□□□ -0.37
VCP-206ENST00000480327 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
VCP-206ENST00000480327 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
VCP-206ENST00000480327 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
VCP-206ENST00000480327 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
VCP-206ENST00000480327 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.38
VCP-206ENST00000480327 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
VCP-206ENST00000480327 PROM2Q8N271 834 aa12.7□□□□□ -0.38
VCP-206ENST00000480327 MYOM1P52179 1685 aa12.7□□□□□ -0.38
VCP-206ENST00000480327 BCL9O00512 1426 aa12.7□□□□□ -0.38
VCP-206ENST00000480327 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
VCP-206ENST00000480327 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
VCP-206ENST00000480327 EIF4G2P78344 907 aaKnown RBP eCLIP12.69□□□□□ -0.38
VCP-206ENST00000480327 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
VCP-206ENST00000480327 PDGFDQ9GZP0 370 aaPredicted RBP12.69□□□□□ -0.38
VCP-206ENST00000480327 ABCC6O95255 1503 aa12.68□□□□□ -0.38
VCP-206ENST00000480327 PLSCR1O15162 318 aa12.68□□□□□ -0.38
VCP-206ENST00000480327 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
VCP-206ENST00000480327 DDB1Q16531 1140 aa12.68□□□□□ -0.38
VCP-206ENST00000480327 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
VCP-206ENST00000480327 BTAF1O14981 1849 aa12.67□□□□□ -0.38
VCP-206ENST00000480327 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
VCP-206ENST00000480327 TESK2Q96S53 571 aa12.67□□□□□ -0.38
VCP-206ENST00000480327 UTRNP46939 3433 aa12.66□□□□□ -0.38
VCP-206ENST00000480327 SOX12O15370 315 aa12.66□□□□□ -0.38
VCP-206ENST00000480327 KCNQ2O43526 872 aa12.66□□□□□ -0.38
VCP-206ENST00000480327 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
VCP-206ENST00000480327 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
VCP-206ENST00000480327 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
VCP-206ENST00000480327 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
VCP-206ENST00000480327 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
VCP-206ENST00000480327 TNS2Q63HR2 1409 aa12.65□□□□□ -0.38
VCP-206ENST00000480327 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
VCP-206ENST00000480327 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
VCP-206ENST00000480327 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
VCP-206ENST00000480327 USP31Q70CQ4 1352 aa12.65□□□□□ -0.38
VCP-206ENST00000480327 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
VCP-206ENST00000480327 KCNH5Q8NCM2 988 aa12.64□□□□□ -0.39
VCP-206ENST00000480327 KAT6BQ8WYB5 2073 aa12.64□□□□□ -0.39
VCP-206ENST00000480327 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
VCP-206ENST00000480327 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
VCP-206ENST00000480327 NINLQ9Y2I6 1382 aa12.63□□□□□ -0.39
VCP-206ENST00000480327 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
VCP-206ENST00000480327 TMF1P82094 1093 aa12.62□□□□□ -0.39
VCP-206ENST00000480327 NME9Q86XW9 330 aa12.62□□□□□ -0.39
VCP-206ENST00000480327 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
VCP-206ENST00000480327 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
VCP-206ENST00000480327 COL24A1Q17RW2 1714 aa12.62□□□□□ -0.39
VCP-206ENST00000480327 FAM208AQ9UK61 1670 aaKnown RBP12.61□□□□□ -0.39
VCP-206ENST00000480327 PTGER2P43116 358 aa12.61□□□□□ -0.39
VCP-206ENST00000480327 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
VCP-206ENST00000480327 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
VCP-206ENST00000480327 ERBB3P21860 1342 aa12.61□□□□□ -0.39
VCP-206ENST00000480327 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
VCP-206ENST00000480327 CSB-PGBD3P0DP91 1061 aa12.6□□□□□ -0.39
VCP-206ENST00000480327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
VCP-206ENST00000480327 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
VCP-206ENST00000480327 CHD4Q14839 1912 aa12.6□□□□□ -0.39
VCP-206ENST00000480327 EXOC5O00471 708 aa12.59□□□□□ -0.39
VCP-206ENST00000480327 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
VCP-206ENST00000480327 YY1P25490 414 aa12.59□□□□□ -0.39
VCP-206ENST00000480327 PPP1R1BQ9UD71 204 aaPredicted RBP12.59□□□□□ -0.39
VCP-206ENST00000480327 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
VCP-206ENST00000480327 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
VCP-206ENST00000480327 LY75O60449 1722 aa12.58□□□□□ -0.4
VCP-206ENST00000480327 SLC15A2Q16348 729 aa12.58□□□□□ -0.4
VCP-206ENST00000480327 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
VCP-206ENST00000480327 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
VCP-206ENST00000480327 EDC4Q6P2E9 1401 aaKnown RBP12.57□□□□□ -0.4
VCP-206ENST00000480327 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
VCP-206ENST00000480327 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
VCP-206ENST00000480327 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
VCP-206ENST00000480327 GOLGB1Q14789 3259 aaKnown RBP12.55□□□□□ -0.4
VCP-206ENST00000480327 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
VCP-206ENST00000480327 LRRC4BQ9NT99 713 aa12.55□□□□□ -0.4
VCP-206ENST00000480327 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
VCP-206ENST00000480327 IL2RBP14784 551 aa12.54□□□□□ -0.4
VCP-206ENST00000480327 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
VCP-206ENST00000480327 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
VCP-206ENST00000480327 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
VCP-206ENST00000480327 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
VCP-206ENST00000480327 KIF7Q2M1P5 1343 aa12.53□□□□□ -0.4
VCP-206ENST00000480327 FBLN1P23142 703 aa12.52□□□□□ -0.41
VCP-206ENST00000480327 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
VCP-206ENST00000480327 MTFR1LQ9H019 292 aa12.52□□□□□ -0.41
VCP-206ENST00000480327 KIF20BQ96Q89 1820 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms