RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
PRKN-207ENST00000479615 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
PRKN-207ENST00000479615 WDR17Q8IZU2 1322 aa21.11■□□□□ 0.97
PRKN-207ENST00000479615 USP47Q96K76 1375 aa21.1■□□□□ 0.97
PRKN-207ENST00000479615 ABCC6O95255 1503 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 AXIN2Q9Y2T1 843 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 A0A1W2PP64 1363 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 CARD10Q9BWT7 1032 aa21.08■□□□□ 0.97
PRKN-207ENST00000479615 DISP2A7MBM2 1401 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 SOX12O15370 315 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 CSB-PGBD3P0DP91 1061 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 FAM182BQ5T319 152 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 NME9Q86XW9 330 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 NFAT5O94916 1531 aa21.05■□□□□ 0.96
PRKN-207ENST00000479615 DDB1Q16531 1140 aa21.05■□□□□ 0.96
PRKN-207ENST00000479615 ANKRD36BQ8N2N9 1353 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 COL18A1P39060 1754 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 TRIM37O94972 964 aa21.03■□□□□ 0.96
PRKN-207ENST00000479615 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
PRKN-207ENST00000479615 USP54Q70EL1 1684 aa21.02■□□□□ 0.96
PRKN-207ENST00000479615 EN1Q05925 392 aaPredicted RBP21.02■□□□□ 0.96
PRKN-207ENST00000479615 COG3Q96JB2 828 aa21.02■□□□□ 0.96
PRKN-207ENST00000479615 APBA3O96018 575 aa21■□□□□ 0.95
PRKN-207ENST00000479615 OVOS2A0A0G2JMS6 1433 aa21■□□□□ 0.95
PRKN-207ENST00000479615 OVOS2A0A0J9YW53 1432 aa21■□□□□ 0.95
PRKN-207ENST00000479615 OVOS2Q6IE36 1432 aa21■□□□□ 0.95
PRKN-207ENST00000479615 PARP4Q9UKK3 1724 aaKnown RBP21■□□□□ 0.95
PRKN-207ENST00000479615 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
PRKN-207ENST00000479615 ERBB3P21860 1342 aa20.99■□□□□ 0.95
PRKN-207ENST00000479615 EXOC5O00471 708 aa20.98■□□□□ 0.95
PRKN-207ENST00000479615 CAMKK2Q96RR4 588 aa20.98■□□□□ 0.95
PRKN-207ENST00000479615 IP6K1Q92551 441 aa20.97■□□□□ 0.95
PRKN-207ENST00000479615 BCL9O00512 1426 aa20.96■□□□□ 0.95
PRKN-207ENST00000479615 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
PRKN-207ENST00000479615 ANKRD24Q8TF21 1146 aa20.95■□□□□ 0.94
PRKN-207ENST00000479615 NLRP2Q9NX02 1062 aa20.95■□□□□ 0.94
PRKN-207ENST00000479615 BCL11BQ9C0K0 894 aaPredicted RBP20.93■□□□□ 0.94
PRKN-207ENST00000479615 FYB1O15117 783 aa20.92■□□□□ 0.94
PRKN-207ENST00000479615 PLSCR1O15162 318 aa20.92■□□□□ 0.94
PRKN-207ENST00000479615 IL2RBP14784 551 aa20.92■□□□□ 0.94
PRKN-207ENST00000479615 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
PRKN-207ENST00000479615 AMPHP49418 695 aa20.91■□□□□ 0.94
PRKN-207ENST00000479615 NBPF14Q5TI25 921 aa20.91■□□□□ 0.94
PRKN-207ENST00000479615 MARCH10Q8NA82 808 aaPredicted RBP20.91■□□□□ 0.94
PRKN-207ENST00000479615 EIF4G2P78344 907 aaKnown RBP eCLIP20.9■□□□□ 0.946e-6■■■■□ 25.1
PRKN-207ENST00000479615 LRRC37A3O60309 1634 aa20.89■□□□□ 0.94
PRKN-207ENST00000479615 MAP3K19Q56UN5 1328 aa20.89■□□□□ 0.93
PRKN-207ENST00000479615 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
PRKN-207ENST00000479615 HOXC9P31274 260 aa20.88■□□□□ 0.93
PRKN-207ENST00000479615 TNS2Q63HR2 1409 aa20.87■□□□□ 0.93
PRKN-207ENST00000479615 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
PRKN-207ENST00000479615 GGNBP2Q9H3C7 697 aa20.87■□□□□ 0.93
PRKN-207ENST00000479615 KIF24Q5T7B8 1368 aa20.86■□□□□ 0.93
PRKN-207ENST00000479615 PSDA5PKW4 1024 aaPredicted RBP20.86■□□□□ 0.93
PRKN-207ENST00000479615 LTN1O94822 1766 aa20.86■□□□□ 0.93
PRKN-207ENST00000479615 PEAK1Q9H792 1746 aa20.86■□□□□ 0.93
PRKN-207ENST00000479615 R3HDM1Q15032 1099 aaKnown RBP20.85■□□□□ 0.93
PRKN-207ENST00000479615 WNK3Q9BYP7 1800 aa20.84■□□□□ 0.93
PRKN-207ENST00000479615 CARD14Q9BXL6 1004 aa20.83■□□□□ 0.93
PRKN-207ENST00000479615 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
PRKN-207ENST00000479615 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
PRKN-207ENST00000479615 LTV1Q96GA3 475 aaPredicted RBP20.82■□□□□ 0.92
PRKN-207ENST00000479615 SMG6Q86US8 1419 aaKnown RBP20.81■□□□□ 0.92
PRKN-207ENST00000479615 FAM208AQ9UK61 1670 aaKnown RBP20.8■□□□□ 0.92
PRKN-207ENST00000479615 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
PRKN-207ENST00000479615 RRS1Q15050 365 aaKnown RBP20.8■□□□□ 0.92
PRKN-207ENST00000479615 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
PRKN-207ENST00000479615 FLT4P35916 1363 aa20.79■□□□□ 0.92
PRKN-207ENST00000479615 RGPD3A6NKT7 1758 aaPredicted RBP20.78■□□□□ 0.92
PRKN-207ENST00000479615 RGPD4Q7Z3J3 1758 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 INSRP06213 1382 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 FBLN1P23142 703 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 LRP5O75197 1615 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 RREB1Q92766 1687 aa20.77■□□□□ 0.91
PRKN-207ENST00000479615 SBF2Q86WG5 1849 aa20.76■□□□□ 0.91
PRKN-207ENST00000479615 ZCRB1Q8TBF4 217 aaKnown RBP20.75■□□□□ 0.91
PRKN-207ENST00000479615 POLR3GLQ9BT43 218 aa20.75■□□□□ 0.91
PRKN-207ENST00000479615 PTF1AQ7RTS3 328 aa20.74■□□□□ 0.91
PRKN-207ENST00000479615 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
PRKN-207ENST00000479615 RAPGEF4Q8WZA2 1011 aa20.74■□□□□ 0.91
PRKN-207ENST00000479615 MYOM1P52179 1685 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 KCNQ2O43526 872 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 TXNRD1Q16881 649 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 HSP90AB2PQ58FF8 381 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 PROM2Q8N271 834 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 ACSBG1Q96GR2 724 aa20.72■□□□□ 0.91
PRKN-207ENST00000479615 NUP188Q5SRE5 1749 aa20.72■□□□□ 0.91
PRKN-207ENST00000479615 KIF20BQ96Q89 1820 aa20.71■□□□□ 0.91
PRKN-207ENST00000479615 TATP17735 454 aaPredicted RBP20.71■□□□□ 0.91
PRKN-207ENST00000479615 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
PRKN-207ENST00000479615 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
PRKN-207ENST00000479615 NSD2O96028 1365 aa20.7■□□□□ 0.9
PRKN-207ENST00000479615 HMGB2P26583 209 aaKnown RBP20.69■□□□□ 0.9
PRKN-207ENST00000479615 PANK3Q9H999 370 aa20.69■□□□□ 0.9
PRKN-207ENST00000479615 SPON1Q9HCB6 807 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms