RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MYT1Q01538 1121 aa36.85■■■■□ 3.49
CCM2-211ENST00000478582 COG3Q96JB2 828 aa36.84■■■■□ 3.49
CCM2-211ENST00000478582 CGNL1Q0VF96 1302 aa36.84■■■■□ 3.49
CCM2-211ENST00000478582 KRT27Q7Z3Y8 459 aa36.83■■■■□ 3.49
CCM2-211ENST00000478582 CCDC125Q86Z20 511 aa36.82■■■■□ 3.48
CCM2-211ENST00000478582 AATKQ6ZMQ8 1374 aa36.81■■■■□ 3.48
CCM2-211ENST00000478582 GGNBP2Q9H3C7 697 aa36.81■■■■□ 3.48
CCM2-211ENST00000478582 ZBTB7CA1YPR0 619 aa36.8■■■■□ 3.48
CCM2-211ENST00000478582 NFAT5O94916 1531 aa36.8■■■■□ 3.48
CCM2-211ENST00000478582 KIF20BQ96Q89 1820 aa36.79■■■■□ 3.48
CCM2-211ENST00000478582 LARP1Q6PKG0 1096 aaKnown RBP36.78■■■■□ 3.48
CCM2-211ENST00000478582 PER1O15534 1290 aaPredicted RBP36.77■■■■□ 3.48
CCM2-211ENST00000478582 ARHGEF25Q86VW2 580 aa36.77■■■■□ 3.48
CCM2-211ENST00000478582 KNSTRNQ9Y448 316 aa36.77■■■■□ 3.48
CCM2-211ENST00000478582 COL5A2P05997 1499 aaPredicted RBP36.75■■■■□ 3.47
CCM2-211ENST00000478582 THSD7AQ9UPZ6 1657 aa36.74■■■■□ 3.47
CCM2-211ENST00000478582 USP35Q9P2H5 1018 aa36.74■■■■□ 3.47
CCM2-211ENST00000478582 EP400Q96L91 3159 aa36.73■■■■□ 3.47
CCM2-211ENST00000478582 SOX12O15370 315 aa36.73■■■■□ 3.47
CCM2-211ENST00000478582 BARGINQ6ZT62 677 aa36.73■■■■□ 3.47
CCM2-211ENST00000478582 COL18A1P39060 1754 aa36.73■■■■□ 3.47
CCM2-211ENST00000478582 NSD2O96028 1365 aa36.72■■■■□ 3.47
CCM2-211ENST00000478582 TCP11L2Q8N4U5 519 aa36.7■■■■□ 3.47
CCM2-211ENST00000478582 AXIN2Q9Y2T1 843 aa36.69■■■■□ 3.46
CCM2-211ENST00000478582 THRAP3Q9Y2W1 955 aaKnown RBP36.69■■■■□ 3.46
CCM2-211ENST00000478582 BLMP54132 1417 aaPredicted RBP36.68■■■■□ 3.46
CCM2-211ENST00000478582 AMER1Q5JTC6 1135 aaPredicted RBP36.68■■■■□ 3.46
CCM2-211ENST00000478582 CRB1P82279 1406 aa36.67■■■■□ 3.46
CCM2-211ENST00000478582 ABCC6O95255 1503 aa36.64■■■■□ 3.46
CCM2-211ENST00000478582 ANKRD26Q9UPS8 1709 aa36.63■■■■□ 3.45
CCM2-211ENST00000478582 NPC1L1Q9UHC9 1359 aa36.62■■■■□ 3.45
CCM2-211ENST00000478582 WDR17Q8IZU2 1322 aa36.61■■■■□ 3.45
CCM2-211ENST00000478582 SF3B2Q13435 895 aaKnown RBP36.61■■■■□ 3.45
CCM2-211ENST00000478582 RGPD5Q99666 1765 aa36.61■■■■□ 3.45
CCM2-211ENST00000478582 FBLN1P23142 703 aa36.6■■■■□ 3.45
CCM2-211ENST00000478582 TOM1L2Q6ZVM7 507 aa36.6■■■■□ 3.45
CCM2-211ENST00000478582 FAM182BQ5T319 152 aa36.59■■■■□ 3.45
CCM2-211ENST00000478582 MAP3K19Q56UN5 1328 aa36.59■■■■□ 3.45
CCM2-211ENST00000478582 LTN1O94822 1766 aa36.58■■■■□ 3.45
CCM2-211ENST00000478582 IP6K1Q92551 441 aa36.56■■■■□ 3.44
CCM2-211ENST00000478582 ZNF316A6NFI3 1004 aaPredicted RBP36.55■■■■□ 3.44
CCM2-211ENST00000478582 PDE3BQ13370 1112 aa36.55■■■■□ 3.44
CCM2-211ENST00000478582 MORC1Q86VD1 984 aa36.55■■■■□ 3.44
CCM2-211ENST00000478582 CSB-PGBD3P0DP91 1061 aa36.54■■■■□ 3.44
CCM2-211ENST00000478582 RRS1Q15050 365 aaKnown RBP36.54■■■■□ 3.44
CCM2-211ENST00000478582 RTL1A6NKG5 1358 aa36.53■■■■□ 3.44
CCM2-211ENST00000478582 KIF24Q5T7B8 1368 aa36.53■■■■□ 3.44
CCM2-211ENST00000478582 FAM196AQ6ZSG2 479 aa36.52■■■■□ 3.44
CCM2-211ENST00000478582 DEFB132Q7Z7B7 95 aa36.52■■■■□ 3.44
CCM2-211ENST00000478582 CARD10Q9BWT7 1032 aa36.51■■■■□ 3.44
CCM2-211ENST00000478582 HOXC9P31274 260 aa36.5■■■■□ 3.43
CCM2-211ENST00000478582 AMPHP49418 695 aa36.5■■■■□ 3.43
CCM2-211ENST00000478582 PARP4Q9UKK3 1724 aaKnown RBP36.5■■■■□ 3.43
CCM2-211ENST00000478582 DDX10Q13206 875 aaKnown RBP36.49■■■■□ 3.43
CCM2-211ENST00000478582 CC2D1BQ5T0F9 858 aaKnown RBP36.49■■■■□ 3.43
CCM2-211ENST00000478582 POLKQ9UBT6 870 aa36.47■■■■□ 3.43
CCM2-211ENST00000478582 TNNT2P45379 298 aaPredicted RBP36.46■■■■□ 3.43
CCM2-211ENST00000478582 CDCA7Q9BWT1 371 aaPredicted RBP36.46■■■■□ 3.43
CCM2-211ENST00000478582 BAG6P46379 1132 aa36.45■■■■□ 3.43
CCM2-211ENST00000478582 EMILIN1Q9Y6C2 1016 aa36.45■■■■□ 3.43
CCM2-211ENST00000478582 RGPD1P0DJD0 1748 aa36.45■■■■□ 3.43
CCM2-211ENST00000478582 FLT4P35916 1363 aa36.44■■■■□ 3.42
CCM2-211ENST00000478582 ERBB3P21860 1342 aa36.44■■■■□ 3.42
CCM2-211ENST00000478582 PEAK1Q9H792 1746 aa36.42■■■■□ 3.42
CCM2-211ENST00000478582 DDB1Q16531 1140 aa36.42■■■■□ 3.42
CCM2-211ENST00000478582 MAP2P11137 1827 aaKnown RBP36.41■■■■□ 3.42
CCM2-211ENST00000478582 ANKRD24Q8TF21 1146 aa36.41■■■■□ 3.42
CCM2-211ENST00000478582 INSRP06213 1382 aa36.4■■■■□ 3.42
CCM2-211ENST00000478582 TRIM37O94972 964 aa36.4■■■■□ 3.42
CCM2-211ENST00000478582 WNK3Q9BYP7 1800 aa36.4■■■■□ 3.42
CCM2-211ENST00000478582 SMG6Q86US8 1419 aaKnown RBP36.39■■■■□ 3.42
CCM2-211ENST00000478582 NLRP2Q9NX02 1062 aa36.38■■■■□ 3.41
CCM2-211ENST00000478582 LRRC37A3O60309 1634 aa36.37■■■■□ 3.41
CCM2-211ENST00000478582 DISP2A7MBM2 1401 aa36.37■■■■□ 3.41
CCM2-211ENST00000478582 HSP90AB2PQ58FF8 381 aa36.37■■■■□ 3.41
CCM2-211ENST00000478582 TNS1Q9HBL0 1735 aaKnown RBP36.35■■■■□ 3.41
CCM2-211ENST00000478582 PPM1GO15355 546 aaPredicted RBP36.35■■■■□ 3.41
CCM2-211ENST00000478582 EN1Q05925 392 aaPredicted RBP36.34■■■■□ 3.41
CCM2-211ENST00000478582 LTV1Q96GA3 475 aaPredicted RBP36.32■■■■□ 3.4
CCM2-211ENST00000478582 EXOC5O00471 708 aa36.31■■■■□ 3.4
CCM2-211ENST00000478582 CNGB1Q14028 1251 aaPredicted RBP36.31■■■■□ 3.4
CCM2-211ENST00000478582 OVOS2A0A0G2JMS6 1433 aa36.31■■■■□ 3.4
CCM2-211ENST00000478582 FAM208AQ9UK61 1670 aaKnown RBP36.29■■■■□ 3.4
CCM2-211ENST00000478582 APBA3O96018 575 aa36.28■■■■□ 3.4
CCM2-211ENST00000478582 MARCH10Q8NA82 808 aaPredicted RBP36.28■■■■□ 3.4
CCM2-211ENST00000478582 IL2RBP14784 551 aa36.26■■■■□ 3.4
CCM2-211ENST00000478582 MTHFSP49914 203 aa36.26■■■■□ 3.4
CCM2-211ENST00000478582 PARD3Q8TEW0 1356 aa36.25■■■■□ 3.39
CCM2-211ENST00000478582 CAMKK2Q96RR4 588 aa36.24■■■■□ 3.39
CCM2-211ENST00000478582 EZH2Q15910 746 aaKnown RBP36.23■■■■□ 3.39
CCM2-211ENST00000478582 NBPF6Q5VWK0 638 aa36.22■■■■□ 3.39
CCM2-211ENST00000478582 NBPF4Q96M43 638 aa36.22■■■■□ 3.39
CCM2-211ENST00000478582 BCL9O00512 1426 aa36.22■■■■□ 3.39
CCM2-211ENST00000478582 TNS2Q63HR2 1409 aa36.21■■■■□ 3.39
CCM2-211ENST00000478582 SBF2Q86WG5 1849 aa36.2■■■■□ 3.39
CCM2-211ENST00000478582 PPP2R1AP30153 589 aa36.2■■■■□ 3.39
CCM2-211ENST00000478582 EIF4A2Q14240 407 aaKnown RBP36.2■■■■□ 3.39
CCM2-211ENST00000478582 RALBP1Q15311 655 aa36.19■■■■□ 3.38
CCM2-211ENST00000478582 RGPD2P0DJD1 1756 aa36.15■■■■□ 3.38
CCM2-211ENST00000478582 BCL11BQ9C0K0 894 aaPredicted RBP36.15■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms