RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SSH2Q76I76 1423 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 USP31Q70CQ4 1352 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 NKTRP30414 1462 aaKnown RBP10.37□□□□□ -0.75
VMA21-203ENST00000477649 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 CCDC146Q8IYE0 955 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 TCP11L2Q8N4U5 519 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 CDCA7LQ96GN5 454 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 MYH16Q9H6N6 1097 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 LRRC7Q96NW7 1537 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
VMA21-203ENST00000477649 IL16Q14005 1332 aa10.36□□□□□ -0.75
VMA21-203ENST00000477649 OVOS2A0A0J9YW53 1432 aa10.36□□□□□ -0.75
VMA21-203ENST00000477649 OVOS2Q6IE36 1432 aa10.36□□□□□ -0.75
VMA21-203ENST00000477649 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
VMA21-203ENST00000477649 NCOA3Q9Y6Q9 1424 aa10.36□□□□□ -0.75
VMA21-203ENST00000477649 CHD2O14647 1828 aaKnown RBP10.36□□□□□ -0.75
VMA21-203ENST00000477649 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
VMA21-203ENST00000477649 NME9Q86XW9 330 aa10.36□□□□□ -0.75
VMA21-203ENST00000477649 NGDNQ8NEJ9 315 aaKnown RBP10.36□□□□□ -0.75
VMA21-203ENST00000477649 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
VMA21-203ENST00000477649 NRKQ7Z2Y5 1582 aa10.35□□□□□ -0.75
VMA21-203ENST00000477649 U2SURPO15042 1029 aaKnown RBP10.35□□□□□ -0.75
VMA21-203ENST00000477649 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
VMA21-203ENST00000477649 NWD1Q149M9 1564 aa10.35□□□□□ -0.75
VMA21-203ENST00000477649 FMN2Q9NZ56 1722 aa10.34□□□□□ -0.75
VMA21-203ENST00000477649 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
VMA21-203ENST00000477649 FBXO41Q8TF61 875 aa10.34□□□□□ -0.75
VMA21-203ENST00000477649 LMOD3Q0VAK6 560 aa10.33□□□□□ -0.76
VMA21-203ENST00000477649 IL13P35225 146 aa10.32□□□□□ -0.76
VMA21-203ENST00000477649 TMPOP42166 694 aaKnown RBP10.32□□□□□ -0.76
VMA21-203ENST00000477649 AAMPQ13685 434 aa10.32□□□□□ -0.76
VMA21-203ENST00000477649 ZNF428Q96B54 188 aa10.31□□□□□ -0.76
VMA21-203ENST00000477649 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
VMA21-203ENST00000477649 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
VMA21-203ENST00000477649 PHF8Q9UPP1 1060 aa10.31□□□□□ -0.76
VMA21-203ENST00000477649 NCKAP5LQ9HCH0 1330 aa10.31□□□□□ -0.76
VMA21-203ENST00000477649 NALCNQ8IZF0 1738 aa10.3□□□□□ -0.76
VMA21-203ENST00000477649 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
VMA21-203ENST00000477649 CCDC136Q96JN2 1154 aa10.3□□□□□ -0.76
VMA21-203ENST00000477649 USP54Q70EL1 1684 aa10.3□□□□□ -0.76
VMA21-203ENST00000477649 DCCP43146 1447 aa10.3□□□□□ -0.76
VMA21-203ENST00000477649 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 FLT4P35916 1363 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 PPM1GO15355 546 aaPredicted RBP10.29□□□□□ -0.76
VMA21-203ENST00000477649 MS4A1P11836 297 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 PDE3AQ14432 1141 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 C19orf44Q9H6X5 657 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 LMTK3Q96Q04 1460 aa10.29□□□□□ -0.76
VMA21-203ENST00000477649 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
VMA21-203ENST00000477649 RIPK4P57078 832 aa10.28□□□□□ -0.76
VMA21-203ENST00000477649 PMFBP1Q8TBY8 1022 aa10.28□□□□□ -0.76
VMA21-203ENST00000477649 MAP2P11137 1827 aaKnown RBP10.28□□□□□ -0.76
VMA21-203ENST00000477649 ARHGEF10O15013 1369 aa10.27□□□□□ -0.76
VMA21-203ENST00000477649 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 NUTM2FA1L443 756 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 C7P10643 843 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 PRKAR2BP31323 418 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
VMA21-203ENST00000477649 NEUROD2Q15784 382 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 C14orf37Q86TY3 774 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
VMA21-203ENST00000477649 KCNH5Q8NCM2 988 aa10.27□□□□□ -0.77
VMA21-203ENST00000477649 NLRP6P59044 892 aa10.26□□□□□ -0.77
VMA21-203ENST00000477649 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
VMA21-203ENST00000477649 ASTLQ6HA08 431 aaPredicted RBP10.26□□□□□ -0.77
VMA21-203ENST00000477649 CDAN1Q8IWY9 1227 aa10.26□□□□□ -0.77
VMA21-203ENST00000477649 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
VMA21-203ENST00000477649 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
VMA21-203ENST00000477649 TRIM35Q9UPQ4 493 aa10.26□□□□□ -0.77
VMA21-203ENST00000477649 RRP7AQ9Y3A4 280 aaKnown RBP10.26□□□□□ -0.77
VMA21-203ENST00000477649 MST1RQ04912 1400 aa10.25□□□□□ -0.77
VMA21-203ENST00000477649 PSME1Q06323 249 aa10.25□□□□□ -0.77
VMA21-203ENST00000477649 EIF4A2Q14240 407 aaKnown RBP10.25□□□□□ -0.77
VMA21-203ENST00000477649 ABTB2Q8N961 1025 aa10.25□□□□□ -0.77
VMA21-203ENST00000477649 MAP3K19Q56UN5 1328 aa10.25□□□□□ -0.77
VMA21-203ENST00000477649 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
VMA21-203ENST00000477649 ZBTB22O15209 634 aa10.24□□□□□ -0.77
VMA21-203ENST00000477649 AMPHP49418 695 aa10.24□□□□□ -0.77
VMA21-203ENST00000477649 RARSP54136 660 aaKnown RBP10.24□□□□□ -0.77
VMA21-203ENST00000477649 GNAI1P63096 354 aa10.24□□□□□ -0.77
VMA21-203ENST00000477649 ESCO1Q5FWF5 840 aa10.24□□□□□ -0.77
VMA21-203ENST00000477649 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
VMA21-203ENST00000477649 IFT57Q9NWB7 429 aa10.24□□□□□ -0.77
VMA21-203ENST00000477649 PIK3C2AO00443 1686 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 HTATSF1O43719 755 aaKnown RBP10.23□□□□□ -0.77
VMA21-203ENST00000477649 ATF3P18847 181 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 HSPA2P54652 639 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 ALDH1L2Q3SY69 923 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 CADPS2Q86UW7 1296 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 EXOC6Q8TAG9 804 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 FANCIQ9NVI1 1328 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 KDRP35968 1356 aa10.23□□□□□ -0.77
VMA21-203ENST00000477649 CANXP27824 592 aaKnown RBP10.22□□□□□ -0.77
VMA21-203ENST00000477649 BRPF1P55201 1214 aaPredicted RBP10.22□□□□□ -0.77
VMA21-203ENST00000477649 GAS2L2Q8NHY3 880 aa10.22□□□□□ -0.77
VMA21-203ENST00000477649 IPO8O15397 1037 aaKnown RBP10.21□□□□□ -0.77
VMA21-203ENST00000477649 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms