RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 HSPA5P11021 654 aaKnown RBP11.53□□□□□ -0.56
HDAC6-221ENST00000477561 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC6-221ENST00000477561 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
HDAC6-221ENST00000477561 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
HDAC6-221ENST00000477561 TCP11L2Q8N4U5 519 aa11.53□□□□□ -0.56
HDAC6-221ENST00000477561 NFAT5O94916 1531 aa11.52□□□□□ -0.57
HDAC6-221ENST00000477561 CSB-PGBD3P0DP91 1061 aa11.52□□□□□ -0.57
HDAC6-221ENST00000477561 FBLN1P23142 703 aa11.52□□□□□ -0.57
HDAC6-221ENST00000477561 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
HDAC6-221ENST00000477561 ANKRD36BQ8N2N9 1353 aa11.52□□□□□ -0.57
HDAC6-221ENST00000477561 COL18A1P39060 1754 aa11.51□□□□□ -0.57
HDAC6-221ENST00000477561 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
HDAC6-221ENST00000477561 COG3Q96JB2 828 aa11.51□□□□□ -0.57
HDAC6-221ENST00000477561 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
HDAC6-221ENST00000477561 CRB1P82279 1406 aa11.51□□□□□ -0.57
HDAC6-221ENST00000477561 THSD7AQ9UPZ6 1657 aa11.5□□□□□ -0.57
HDAC6-221ENST00000477561 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
HDAC6-221ENST00000477561 SF3B2Q13435 895 aaKnown RBP11.5□□□□□ -0.57
HDAC6-221ENST00000477561 DEFB132Q7Z7B7 95 aa11.5□□□□□ -0.57
HDAC6-221ENST00000477561 THRAP3Q9Y2W1 955 aaKnown RBP11.5□□□□□ -0.57
HDAC6-221ENST00000477561 WDR17Q8IZU2 1322 aa11.5□□□□□ -0.57
HDAC6-221ENST00000477561 OVOS2A0A0J9YW53 1432 aa11.5□□□□□ -0.57
HDAC6-221ENST00000477561 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-221ENST00000477561 OVOS2Q6IE36 1432 aa11.5□□□□□ -0.57
HDAC6-221ENST00000477561 FYB1O15117 783 aa11.49□□□□□ -0.57
HDAC6-221ENST00000477561 CARD14Q9BXL6 1004 aa11.49□□□□□ -0.57
HDAC6-221ENST00000477561 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
HDAC6-221ENST00000477561 USP54Q70EL1 1684 aa11.48□□□□□ -0.57
HDAC6-221ENST00000477561 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
HDAC6-221ENST00000477561 LTV1Q96GA3 475 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-221ENST00000477561 CARD10Q9BWT7 1032 aa11.47□□□□□ -0.57
HDAC6-221ENST00000477561 NLRP2Q9NX02 1062 aa11.47□□□□□ -0.57
HDAC6-221ENST00000477561 NSD3Q9BZ95 1437 aa11.46□□□□□ -0.57
HDAC6-221ENST00000477561 C11orf95C9JLR9 678 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-221ENST00000477561 TRIM37O94972 964 aa11.46□□□□□ -0.57
HDAC6-221ENST00000477561 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.57
HDAC6-221ENST00000477561 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
HDAC6-221ENST00000477561 IP6K1Q92551 441 aa11.46□□□□□ -0.57
HDAC6-221ENST00000477561 LTN1O94822 1766 aa11.46□□□□□ -0.58
HDAC6-221ENST00000477561 MYOM1P52179 1685 aa11.46□□□□□ -0.58
HDAC6-221ENST00000477561 ERBB3P21860 1342 aa11.45□□□□□ -0.58
HDAC6-221ENST00000477561 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
HDAC6-221ENST00000477561 KCNA4P22459 653 aa11.45□□□□□ -0.58
HDAC6-221ENST00000477561 AMPHP49418 695 aa11.45□□□□□ -0.58
HDAC6-221ENST00000477561 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-221ENST00000477561 DDB1Q16531 1140 aa11.45□□□□□ -0.58
HDAC6-221ENST00000477561 HOXC9P31274 260 aa11.44□□□□□ -0.58
HDAC6-221ENST00000477561 BAG6P46379 1132 aa11.44□□□□□ -0.58
HDAC6-221ENST00000477561 PANK3Q9H999 370 aa11.43□□□□□ -0.58
HDAC6-221ENST00000477561 ABCC6O95255 1503 aa11.43□□□□□ -0.58
HDAC6-221ENST00000477561 CCDC7Q96M83 1385 aa11.42□□□□□ -0.58
HDAC6-221ENST00000477561 EXOC5O00471 708 aa11.42□□□□□ -0.58
HDAC6-221ENST00000477561 APBA3O96018 575 aa11.42□□□□□ -0.58
HDAC6-221ENST00000477561 MARCH10Q8NA82 808 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-221ENST00000477561 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-221ENST00000477561 PARP4Q9UKK3 1724 aaKnown RBP11.42□□□□□ -0.58
HDAC6-221ENST00000477561 EZH2Q15910 746 aaKnown RBP11.41□□□□□ -0.58
HDAC6-221ENST00000477561 KIF20BQ96Q89 1820 aa11.41□□□□□ -0.58
HDAC6-221ENST00000477561 LRRC37A3O60309 1634 aa11.41□□□□□ -0.58
HDAC6-221ENST00000477561 DISP2A7MBM2 1401 aa11.41□□□□□ -0.58
HDAC6-221ENST00000477561 CGNL1Q0VF96 1302 aa11.4□□□□□ -0.58
HDAC6-221ENST00000477561 PPM1GO15355 546 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-221ENST00000477561 IL2RBP14784 551 aa11.4□□□□□ -0.58
HDAC6-221ENST00000477561 TNNT2P45379 298 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-221ENST00000477561 HSP90AB2PQ58FF8 381 aa11.4□□□□□ -0.58
HDAC6-221ENST00000477561 EMILIN1Q9Y6C2 1016 aa11.4□□□□□ -0.58
HDAC6-221ENST00000477561 RGPD1P0DJD0 1748 aa11.4□□□□□ -0.58
HDAC6-221ENST00000477561 OVOS2A0A0G2JMS6 1433 aa11.39□□□□□ -0.59
HDAC6-221ENST00000477561 PTF1AQ7RTS3 328 aa11.39□□□□□ -0.59
HDAC6-221ENST00000477561 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
HDAC6-221ENST00000477561 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
HDAC6-221ENST00000477561 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
HDAC6-221ENST00000477561 NBPF6Q5VWK0 638 aa11.38□□□□□ -0.59
HDAC6-221ENST00000477561 NBPF4Q96M43 638 aa11.38□□□□□ -0.59
HDAC6-221ENST00000477561 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
HDAC6-221ENST00000477561 TNS1Q9HBL0 1735 aaKnown RBP11.38□□□□□ -0.59
HDAC6-221ENST00000477561 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-221ENST00000477561 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-221ENST00000477561 ACSBG1Q96GR2 724 aa11.37□□□□□ -0.59
HDAC6-221ENST00000477561 RTL1A6NKG5 1358 aa11.37□□□□□ -0.59
HDAC6-221ENST00000477561 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
HDAC6-221ENST00000477561 PEAK1Q9H792 1746 aa11.36□□□□□ -0.59
HDAC6-221ENST00000477561 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
HDAC6-221ENST00000477561 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
HDAC6-221ENST00000477561 FLT4P35916 1363 aa11.36□□□□□ -0.59
HDAC6-221ENST00000477561 KCNQ2O43526 872 aa11.35□□□□□ -0.59
HDAC6-221ENST00000477561 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-221ENST00000477561 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
HDAC6-221ENST00000477561 KNSTRNQ9Y448 316 aa11.35□□□□□ -0.59
HDAC6-221ENST00000477561 INSRP06213 1382 aa11.35□□□□□ -0.59
HDAC6-221ENST00000477561 RGPD2P0DJD1 1756 aa11.35□□□□□ -0.59
HDAC6-221ENST00000477561 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
HDAC6-221ENST00000477561 R3HDM1Q15032 1099 aaKnown RBP11.34□□□□□ -0.59
HDAC6-221ENST00000477561 MORC1Q86VD1 984 aa11.34□□□□□ -0.59
HDAC6-221ENST00000477561 KIF24Q5T7B8 1368 aa11.33□□□□□ -0.6
HDAC6-221ENST00000477561 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-221ENST00000477561 ZCRB1Q8TBF4 217 aaKnown RBP11.33□□□□□ -0.6
HDAC6-221ENST00000477561 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
HDAC6-221ENST00000477561 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
HDAC6-221ENST00000477561 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms