RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 NOS1P29475 1434 aa12.91□□□□□ -0.34
ABCF1-205ENST00000475993 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
ABCF1-205ENST00000475993 PTMAP06454 111 aaKnown RBP12.91□□□□□ -0.34
ABCF1-205ENST00000475993 ABCA8O94911 1581 aa12.9□□□□□ -0.34
ABCF1-205ENST00000475993 REREQ9P2R6 1566 aa12.9□□□□□ -0.34
ABCF1-205ENST00000475993 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
ABCF1-205ENST00000475993 ZDHHC9Q9Y397 364 aa12.9□□□□□ -0.34
ABCF1-205ENST00000475993 ADGRB2O60241 1585 aa12.9□□□□□ -0.34
ABCF1-205ENST00000475993 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
ABCF1-205ENST00000475993 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
ABCF1-205ENST00000475993 ADGRL1O94910 1474 aa12.9□□□□□ -0.35
ABCF1-205ENST00000475993 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
ABCF1-205ENST00000475993 ZNF518AQ6AHZ1 1483 aa12.89□□□□□ -0.35
ABCF1-205ENST00000475993 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
ABCF1-205ENST00000475993 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
ABCF1-205ENST00000475993 SPTLC3Q9NUV7 552 aa12.89□□□□□ -0.35
ABCF1-205ENST00000475993 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
ABCF1-205ENST00000475993 MBD3O95983 291 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
ABCF1-205ENST00000475993 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
ABCF1-205ENST00000475993 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
ABCF1-205ENST00000475993 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 CLGNO14967 610 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 CDC45O75419 566 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 SLC20A2Q08357 652 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 GCC1Q96CN9 775 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
ABCF1-205ENST00000475993 FAM177BA6PVY3 158 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 MMP14P50281 582 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 TSPY26PQ9H489 355 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 SOX12O15370 315 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 ANKRD45Q5TZF3 282 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
ABCF1-205ENST00000475993 ANKRD7Q92527 254 aa12.87□□□□□ -0.35
ABCF1-205ENST00000475993 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
ABCF1-205ENST00000475993 ATP10BO94823 1461 aa12.86□□□□□ -0.35
ABCF1-205ENST00000475993 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
ABCF1-205ENST00000475993 CDC42BPBQ9Y5S2 1711 aa12.86□□□□□ -0.35
ABCF1-205ENST00000475993 PSEN1P49768 467 aa12.86□□□□□ -0.35
ABCF1-205ENST00000475993 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
ABCF1-205ENST00000475993 MED14O60244 1454 aa12.85□□□□□ -0.35
ABCF1-205ENST00000475993 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
ABCF1-205ENST00000475993 PREX2Q70Z35 1606 aa12.85□□□□□ -0.35
ABCF1-205ENST00000475993 NSD3Q9BZ95 1437 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 FAM193AP78312 1265 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 FEZ1Q99689 392 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 CHAMP1Q96JM3 812 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 PPRC1Q5VV67 1664 aaKnown RBP12.84□□□□□ -0.35
ABCF1-205ENST00000475993 YEATS2Q9ULM3 1422 aa12.84□□□□□ -0.35
ABCF1-205ENST00000475993 MTHFSP49914 203 aa12.83□□□□□ -0.35
ABCF1-205ENST00000475993 CFAP44Q96MT7 982 aa12.83□□□□□ -0.35
ABCF1-205ENST00000475993 CARMIL2Q6F5E8 1435 aa12.83□□□□□ -0.36
ABCF1-205ENST00000475993 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.363e-7■■■□□ 18.3
ABCF1-205ENST00000475993 CFAP53Q96M91 514 aa12.83□□□□□ -0.36
ABCF1-205ENST00000475993 CTIFO43310 598 aaKnown RBP12.83□□□□□ -0.36
ABCF1-205ENST00000475993 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.36
ABCF1-205ENST00000475993 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
ABCF1-205ENST00000475993 TIGD1Q96MW7 591 aa12.83□□□□□ -0.36
ABCF1-205ENST00000475993 TRPM2O94759 1503 aa12.83□□□□□ -0.36
ABCF1-205ENST00000475993 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
ABCF1-205ENST00000475993 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
ABCF1-205ENST00000475993 CAPN2P17655 700 aa12.82□□□□□ -0.36
ABCF1-205ENST00000475993 C17orf53Q8N3J3 647 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-205ENST00000475993 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-205ENST00000475993 PTPRTO14522 1441 aa12.82□□□□□ -0.36
ABCF1-205ENST00000475993 ST18O60284 1047 aa12.82□□□□□ -0.36
ABCF1-205ENST00000475993 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
ABCF1-205ENST00000475993 IL16Q14005 1332 aa12.82□□□□□ -0.36
ABCF1-205ENST00000475993 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 CD109Q6YHK3 1445 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
ABCF1-205ENST00000475993 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
ABCF1-205ENST00000475993 DIAPH3Q9NSV4 1193 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
ABCF1-205ENST00000475993 MLECQ14165 292 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 LOC102724159A0A0B4J2E5 919 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 CCDC66A2RUB6 948 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
ABCF1-205ENST00000475993 PHF14O94880 888 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 U2AF1L5P0DN76 240 aaPredicted RBP12.8□□□□□ -0.36
ABCF1-205ENST00000475993 U2AF1Q01081 240 aaKnown RBP eCLIP12.8□□□□□ -0.36
ABCF1-205ENST00000475993 GABPB1Q06547 395 aaPredicted RBP12.8□□□□□ -0.36
ABCF1-205ENST00000475993 PWP2Q15269 919 aaKnown RBP12.8□□□□□ -0.36
ABCF1-205ENST00000475993 MPNDQ8N594 471 aa12.8□□□□□ -0.36
ABCF1-205ENST00000475993 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 USP25Q9UHP3 1055 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 ADCY5O95622 1261 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 BRD1O95696 1058 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms