RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 TOM1L2Q6ZVM7 507 aa23.55■■□□□ 1.36
LMNB2-202ENST00000475819 ZNF316A6NFI3 1004 aaPredicted RBP23.54■■□□□ 1.36
LMNB2-202ENST00000475819 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
LMNB2-202ENST00000475819 AKAP12Q02952 1782 aa23.54■■□□□ 1.36
LMNB2-202ENST00000475819 EVC2Q86UK5 1308 aa23.54■■□□□ 1.36
LMNB2-202ENST00000475819 SOX12O15370 315 aa23.53■■□□□ 1.36
LMNB2-202ENST00000475819 PPP1R1BQ9UD71 204 aaPredicted RBP23.53■■□□□ 1.36
LMNB2-202ENST00000475819 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
LMNB2-202ENST00000475819 C11orf95C9JLR9 678 aaPredicted RBP23.52■■□□□ 1.36
LMNB2-202ENST00000475819 PEAK1Q9H792 1746 aa23.51■■□□□ 1.35
LMNB2-202ENST00000475819 RGPD3A6NKT7 1758 aaPredicted RBP23.51■■□□□ 1.35
LMNB2-202ENST00000475819 RGPD4Q7Z3J3 1758 aa23.51■■□□□ 1.35
LMNB2-202ENST00000475819 DDB1Q16531 1140 aa23.51■■□□□ 1.35
LMNB2-202ENST00000475819 CPSF1Q10570 1443 aaKnown RBP23.5■■□□□ 1.35
LMNB2-202ENST00000475819 SBF2Q86WG5 1849 aa23.5■■□□□ 1.35
LMNB2-202ENST00000475819 CSB-PGBD3P0DP91 1061 aa23.49■■□□□ 1.35
LMNB2-202ENST00000475819 RGPD5Q99666 1765 aa23.48■■□□□ 1.35
LMNB2-202ENST00000475819 COL18A1P39060 1754 aa23.47■■□□□ 1.35
LMNB2-202ENST00000475819 WDR17Q8IZU2 1322 aa23.46■■□□□ 1.35
LMNB2-202ENST00000475819 SPON1Q9HCB6 807 aa23.45■■□□□ 1.34
LMNB2-202ENST00000475819 KCNH5Q8NCM2 988 aa23.44■■□□□ 1.34
LMNB2-202ENST00000475819 TTC21BQ7Z4L5 1316 aa23.43■■□□□ 1.34
LMNB2-202ENST00000475819 ST20-MTHFSA0A0A6YYL1 179 aa23.43■■□□□ 1.34
LMNB2-202ENST00000475819 SBNO2Q9Y2G9 1366 aa23.42■■□□□ 1.34
LMNB2-202ENST00000475819 DCAF8L1A6NGE4 600 aa23.42■■□□□ 1.34
LMNB2-202ENST00000475819 SLC24A1O60721 1099 aa23.42■■□□□ 1.34
LMNB2-202ENST00000475819 MON2Q7Z3U7 1717 aa23.42■■□□□ 1.34
LMNB2-202ENST00000475819 KTN1Q86UP2 1357 aaKnown RBP23.41■■□□□ 1.34
LMNB2-202ENST00000475819 TTC21AQ8NDW8 1320 aa23.41■■□□□ 1.34
LMNB2-202ENST00000475819 ZNF692Q9BU19 519 aaPredicted RBP23.41■■□□□ 1.34
LMNB2-202ENST00000475819 CDCA7Q9BWT1 371 aaPredicted RBP23.41■■□□□ 1.34
LMNB2-202ENST00000475819 BCL11BQ9C0K0 894 aaPredicted RBP23.41■■□□□ 1.34
LMNB2-202ENST00000475819 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
LMNB2-202ENST00000475819 KCNQ2O43526 872 aa23.4■■□□□ 1.34
LMNB2-202ENST00000475819 IFFO2Q5TF58 517 aa23.39■■□□□ 1.33
LMNB2-202ENST00000475819 NFAT5O94916 1531 aa23.38■■□□□ 1.33
LMNB2-202ENST00000475819 YY1P25490 414 aa23.38■■□□□ 1.33
LMNB2-202ENST00000475819 ARHGEF25Q86VW2 580 aa23.38■■□□□ 1.33
LMNB2-202ENST00000475819 NINLQ9Y2I6 1382 aa23.38■■□□□ 1.33
LMNB2-202ENST00000475819 ANO8Q9HCE9 1232 aaPredicted RBP23.37■■□□□ 1.33
LMNB2-202ENST00000475819 CASZ1Q86V15 1759 aa23.37■■□□□ 1.33
LMNB2-202ENST00000475819 PLSCR1O15162 318 aa23.36■■□□□ 1.33
LMNB2-202ENST00000475819 MARCH10Q8NA82 808 aaPredicted RBP23.36■■□□□ 1.33
LMNB2-202ENST00000475819 CARD10Q9BWT7 1032 aa23.36■■□□□ 1.33
LMNB2-202ENST00000475819 ABCC6O95255 1503 aa23.36■■□□□ 1.33
LMNB2-202ENST00000475819 TNS2Q63HR2 1409 aa23.35■■□□□ 1.33
LMNB2-202ENST00000475819 LTN1O94822 1766 aa23.35■■□□□ 1.33
LMNB2-202ENST00000475819 PTF1AQ7RTS3 328 aa23.35■■□□□ 1.33
LMNB2-202ENST00000475819 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.35■■□□□ 1.33
LMNB2-202ENST00000475819 CCDC7Q96M83 1385 aa23.35■■□□□ 1.33
LMNB2-202ENST00000475819 TESK2Q96S53 571 aa23.34■■□□□ 1.33
LMNB2-202ENST00000475819 EXOC5O00471 708 aa23.33■■□□□ 1.33
LMNB2-202ENST00000475819 TMF1P82094 1093 aa23.33■■□□□ 1.33
LMNB2-202ENST00000475819 MYOM1P52179 1685 aa23.32■■□□□ 1.32
LMNB2-202ENST00000475819 NHSQ6T4R5 1651 aa23.32■■□□□ 1.32
LMNB2-202ENST00000475819 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
LMNB2-202ENST00000475819 STK32BQ9NY57 414 aa23.31■■□□□ 1.32
LMNB2-202ENST00000475819 BCL9O00512 1426 aa23.31■■□□□ 1.32
LMNB2-202ENST00000475819 ZBTB7AO95365 584 aa23.3■■□□□ 1.32
LMNB2-202ENST00000475819 CDCA8Q53HL2 280 aa23.3■■□□□ 1.32
LMNB2-202ENST00000475819 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
LMNB2-202ENST00000475819 NLRP2Q9NX02 1062 aa23.29■■□□□ 1.32
LMNB2-202ENST00000475819 TXNRD1Q16881 649 aa23.28■■□□□ 1.32
LMNB2-202ENST00000475819 HDGFL2Q7Z4V5 671 aaPredicted RBP23.27■■□□□ 1.32
LMNB2-202ENST00000475819 NME9Q86XW9 330 aa23.27■■□□□ 1.32
LMNB2-202ENST00000475819 ERBB3P21860 1342 aa23.27■■□□□ 1.32
LMNB2-202ENST00000475819 KIF7Q2M1P5 1343 aa23.27■■□□□ 1.32
LMNB2-202ENST00000475819 WASHC2AQ641Q2 1341 aa23.27■■□□□ 1.32
LMNB2-202ENST00000475819 ACSBG1Q96GR2 724 aa23.26■■□□□ 1.31
LMNB2-202ENST00000475819 PDGFDQ9GZP0 370 aaPredicted RBP23.26■■□□□ 1.31
LMNB2-202ENST00000475819 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
LMNB2-202ENST00000475819 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
LMNB2-202ENST00000475819 IL2RBP14784 551 aa23.23■■□□□ 1.31
LMNB2-202ENST00000475819 PROM2Q8N271 834 aa23.23■■□□□ 1.31
LMNB2-202ENST00000475819 BTAF1O14981 1849 aa23.23■■□□□ 1.31
LMNB2-202ENST00000475819 USP31Q70CQ4 1352 aa23.23■■□□□ 1.31
LMNB2-202ENST00000475819 EDC4Q6P2E9 1401 aaKnown RBP23.23■■□□□ 1.31
LMNB2-202ENST00000475819 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
LMNB2-202ENST00000475819 SLC15A2Q16348 729 aa23.21■■□□□ 1.31
LMNB2-202ENST00000475819 ANKRD24Q8TF21 1146 aa23.21■■□□□ 1.31
LMNB2-202ENST00000475819 FAM208AQ9UK61 1670 aaKnown RBP23.2■■□□□ 1.3
LMNB2-202ENST00000475819 PUS7Q96PZ0 661 aaKnown RBP23.2■■□□□ 1.3
LMNB2-202ENST00000475819 TERF2IPQ9NYB0 399 aa23.2■■□□□ 1.3
LMNB2-202ENST00000475819 A0A1W2PP64 1363 aa23.19■■□□□ 1.3
LMNB2-202ENST00000475819 POLR3GLQ9BT43 218 aa23.17■■□□□ 1.3
LMNB2-202ENST00000475819 MTFR1LQ9H019 292 aa23.17■■□□□ 1.3
LMNB2-202ENST00000475819 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
LMNB2-202ENST00000475819 PAPPAQ13219 1627 aa23.16■■□□□ 1.3
LMNB2-202ENST00000475819 PTGER2P43116 358 aa23.16■■□□□ 1.3
LMNB2-202ENST00000475819 LTV1Q96GA3 475 aaPredicted RBP23.16■■□□□ 1.3
LMNB2-202ENST00000475819 FHDC1Q9C0D6 1143 aaPredicted RBP23.15■■□□□ 1.3
LMNB2-202ENST00000475819 DDX10Q13206 875 aaKnown RBP23.13■■□□□ 1.29
LMNB2-202ENST00000475819 DOT1LQ8TEK3 1739 aa23.12■■□□□ 1.29
LMNB2-202ENST00000475819 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
LMNB2-202ENST00000475819 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
LMNB2-202ENST00000475819 KLHL34Q8N239 644 aa23.1■■□□□ 1.29
LMNB2-202ENST00000475819 SYTL4Q96C24 671 aaPredicted RBP23.1■■□□□ 1.29
LMNB2-202ENST00000475819 COG3Q96JB2 828 aa23.09■■□□□ 1.29
LMNB2-202ENST00000475819 SYT17Q9BSW7 474 aa23.09■■□□□ 1.29
LMNB2-202ENST00000475819 ZNF827Q17R98 1081 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms