RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 AMPHP49418 695 aa12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 IL16Q14005 1332 aa12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
SPTAN1-206ENST00000475367 FLT4P35916 1363 aa12.75□□□□□ -0.37
SPTAN1-206ENST00000475367 FOXO3O43524 673 aa12.75□□□□□ -0.37
SPTAN1-206ENST00000475367 MARF1Q9Y4F3 1742 aaKnown RBP12.75□□□□□ -0.37
SPTAN1-206ENST00000475367 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
SPTAN1-206ENST00000475367 LMTK3Q96Q04 1460 aa12.74□□□□□ -0.37
SPTAN1-206ENST00000475367 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-206ENST00000475367 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
SPTAN1-206ENST00000475367 USP54Q70EL1 1684 aa12.74□□□□□ -0.37
SPTAN1-206ENST00000475367 C1orf167Q5SNV9 1468 aa12.74□□□□□ -0.37
SPTAN1-206ENST00000475367 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-206ENST00000475367 ATF3P18847 181 aa12.73□□□□□ -0.37
SPTAN1-206ENST00000475367 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
SPTAN1-206ENST00000475367 HOXC9P31274 260 aa12.72□□□□□ -0.37
SPTAN1-206ENST00000475367 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-206ENST00000475367 THUMPD2Q9BTF0 503 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-206ENST00000475367 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
SPTAN1-206ENST00000475367 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
SPTAN1-206ENST00000475367 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
SPTAN1-206ENST00000475367 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.37
SPTAN1-206ENST00000475367 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
SPTAN1-206ENST00000475367 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 EYA1Q99502 592 aa12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 MST1RQ04912 1400 aa12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 LAS1LQ9Y4W2 734 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 STRCQ7RTU9 1775 aa12.7□□□□□ -0.38
SPTAN1-206ENST00000475367 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 DCCP43146 1447 aa12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 BCL2L13Q9BXK5 485 aa12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 NFAT5O94916 1531 aa12.69□□□□□ -0.38
SPTAN1-206ENST00000475367 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 FAM83GA6ND36 823 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 IP6K1Q92551 441 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
SPTAN1-206ENST00000475367 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 DLG5Q8TDM6 1919 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 KDRP35968 1356 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 MSH6P52701 1360 aa12.67□□□□□ -0.38
SPTAN1-206ENST00000475367 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
SPTAN1-206ENST00000475367 GNAI1P63096 354 aa12.66□□□□□ -0.38
SPTAN1-206ENST00000475367 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-206ENST00000475367 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
SPTAN1-206ENST00000475367 GCP02774 474 aa12.66□□□□□ -0.38
SPTAN1-206ENST00000475367 PANK1Q8TE04 598 aa12.66□□□□□ -0.38
SPTAN1-206ENST00000475367 LTN1O94822 1766 aa12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 USP19O94966 1318 aa12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 ZNF335Q9H4Z2 1342 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
SPTAN1-206ENST00000475367 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
SPTAN1-206ENST00000475367 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
SPTAN1-206ENST00000475367 SLIT3O75094 1523 aa12.64□□□□□ -0.39
SPTAN1-206ENST00000475367 MCM10Q7L590 875 aa12.64□□□□□ -0.39
SPTAN1-206ENST00000475367 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
SPTAN1-206ENST00000475367 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
SPTAN1-206ENST00000475367 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
SPTAN1-206ENST00000475367 RLBP1P12271 317 aa12.62□□□□□ -0.39
SPTAN1-206ENST00000475367 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
SPTAN1-206ENST00000475367 ZKSCAN2Q63HK3 967 aa12.62□□□□□ -0.39
SPTAN1-206ENST00000475367 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
SPTAN1-206ENST00000475367 VAMP4O75379 141 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
SPTAN1-206ENST00000475367 CHL1O00533 1208 aa12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
SPTAN1-206ENST00000475367 CRB1P82279 1406 aa12.59□□□□□ -0.39
SPTAN1-206ENST00000475367 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-206ENST00000475367 ZC3H6P61129 1189 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms