RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLAIN2Q9P270 581 aa18.1■□□□□ 0.49
TRAF4-210ENST00000475329 EIF4A2Q14240 407 aaKnown RBP18.09■□□□□ 0.49
TRAF4-210ENST00000475329 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
TRAF4-210ENST00000475329 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
TRAF4-210ENST00000475329 LMOD2Q6P5Q4 547 aa18.08■□□□□ 0.48
TRAF4-210ENST00000475329 RSPH6AQ9H0K4 717 aa18.08■□□□□ 0.48
TRAF4-210ENST00000475329 ARHGEF10O15013 1369 aa18.07■□□□□ 0.48
TRAF4-210ENST00000475329 ABCA3Q99758 1704 aa18.07■□□□□ 0.48
TRAF4-210ENST00000475329 NEFMP07197 916 aa18.07■□□□□ 0.48
TRAF4-210ENST00000475329 HSP90AB2PQ58FF8 381 aa18.07■□□□□ 0.48
TRAF4-210ENST00000475329 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
TRAF4-210ENST00000475329 RGPD5Q99666 1765 aa18.07■□□□□ 0.48
TRAF4-210ENST00000475329 HOXC9P31274 260 aa18.06■□□□□ 0.48
TRAF4-210ENST00000475329 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
TRAF4-210ENST00000475329 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
TRAF4-210ENST00000475329 RGPD2P0DJD1 1756 aa18.05■□□□□ 0.48
TRAF4-210ENST00000475329 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
TRAF4-210ENST00000475329 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
TRAF4-210ENST00000475329 CDCA7LQ96GN5 454 aa18.05■□□□□ 0.48
TRAF4-210ENST00000475329 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
TRAF4-210ENST00000475329 NEFLP07196 543 aa18.04■□□□□ 0.48
TRAF4-210ENST00000475329 HMOX1P09601 288 aa18.04■□□□□ 0.48
TRAF4-210ENST00000475329 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
TRAF4-210ENST00000475329 ABCC6O95255 1503 aa18.03■□□□□ 0.48
TRAF4-210ENST00000475329 GCP02774 474 aa18.03■□□□□ 0.48
TRAF4-210ENST00000475329 TMPOP42166 694 aaKnown RBP18.03■□□□□ 0.48
TRAF4-210ENST00000475329 WWC1Q8IX03 1113 aa18.03■□□□□ 0.48
TRAF4-210ENST00000475329 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
TRAF4-210ENST00000475329 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
TRAF4-210ENST00000475329 IP6K1Q92551 441 aa18.02■□□□□ 0.48
TRAF4-210ENST00000475329 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
TRAF4-210ENST00000475329 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
TRAF4-210ENST00000475329 SOS2Q07890 1332 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-210ENST00000475329 SLFN5Q08AF3 891 aa18.01■□□□□ 0.47
TRAF4-210ENST00000475329 CAMTA1Q9Y6Y1 1673 aa18.01■□□□□ 0.47
TRAF4-210ENST00000475329 COL18A1P39060 1754 aa18.01■□□□□ 0.47
TRAF4-210ENST00000475329 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-210ENST00000475329 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
TRAF4-210ENST00000475329 E9PSI1 815 aa18■□□□□ 0.47
TRAF4-210ENST00000475329 SULT6B1Q6IMI4 303 aa18■□□□□ 0.47
TRAF4-210ENST00000475329 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
TRAF4-210ENST00000475329 WDR63Q8IWG1 891 aa18■□□□□ 0.47
TRAF4-210ENST00000475329 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
TRAF4-210ENST00000475329 KDRP35968 1356 aa17.99■□□□□ 0.47
TRAF4-210ENST00000475329 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
TRAF4-210ENST00000475329 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
TRAF4-210ENST00000475329 DUSP27Q5VZP5 1158 aa17.98■□□□□ 0.47
TRAF4-210ENST00000475329 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
TRAF4-210ENST00000475329 RIPK4P57078 832 aa17.97■□□□□ 0.47
TRAF4-210ENST00000475329 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
TRAF4-210ENST00000475329 PHACTR3Q96KR7 559 aa17.96■□□□□ 0.47
TRAF4-210ENST00000475329 EYA1Q99502 592 aa17.96■□□□□ 0.47
TRAF4-210ENST00000475329 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
TRAF4-210ENST00000475329 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
TRAF4-210ENST00000475329 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
TRAF4-210ENST00000475329 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
TRAF4-210ENST00000475329 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
TRAF4-210ENST00000475329 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
TRAF4-210ENST00000475329 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
TRAF4-210ENST00000475329 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
TRAF4-210ENST00000475329 IL16Q14005 1332 aa17.94■□□□□ 0.46
TRAF4-210ENST00000475329 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
TRAF4-210ENST00000475329 CPDO75976 1380 aa17.93■□□□□ 0.46
TRAF4-210ENST00000475329 FKBP8Q14318 412 aa17.93■□□□□ 0.46
TRAF4-210ENST00000475329 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
TRAF4-210ENST00000475329 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
TRAF4-210ENST00000475329 ZC3H6P61129 1189 aaKnown RBP17.92■□□□□ 0.46
TRAF4-210ENST00000475329 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
TRAF4-210ENST00000475329 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
TRAF4-210ENST00000475329 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
TRAF4-210ENST00000475329 TOM1O60784 492 aa17.9■□□□□ 0.46
TRAF4-210ENST00000475329 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
TRAF4-210ENST00000475329 ANKRD24Q8TF21 1146 aa17.9■□□□□ 0.46
TRAF4-210ENST00000475329 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
TRAF4-210ENST00000475329 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-210ENST00000475329 KIAA0232Q92628 1395 aa17.89■□□□□ 0.45
TRAF4-210ENST00000475329 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
TRAF4-210ENST00000475329 NBPF6Q5VWK0 638 aa17.87■□□□□ 0.45
TRAF4-210ENST00000475329 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
TRAF4-210ENST00000475329 NBPF4Q96M43 638 aa17.87■□□□□ 0.45
TRAF4-210ENST00000475329 ERBB3P21860 1342 aa17.87■□□□□ 0.45
TRAF4-210ENST00000475329 RRP1P56182 461 aaKnown RBP17.86■□□□□ 0.45
TRAF4-210ENST00000475329 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
TRAF4-210ENST00000475329 AXIN2Q9Y2T1 843 aa17.86■□□□□ 0.45
TRAF4-210ENST00000475329 FANCIQ9NVI1 1328 aa17.86■□□□□ 0.45
TRAF4-210ENST00000475329 IRX6P78412 446 aaPredicted RBP17.85■□□□□ 0.45
TRAF4-210ENST00000475329 LRRC59Q96AG4 307 aaKnown RBP17.85■□□□□ 0.45
TRAF4-210ENST00000475329 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
TRAF4-210ENST00000475329 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
TRAF4-210ENST00000475329 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
TRAF4-210ENST00000475329 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
TRAF4-210ENST00000475329 PRDM11Q9NQV5 511 aa17.83■□□□□ 0.44
TRAF4-210ENST00000475329 PARP4Q9UKK3 1724 aaKnown RBP17.83■□□□□ 0.44
TRAF4-210ENST00000475329 GNAI1P63096 354 aa17.82■□□□□ 0.44
TRAF4-210ENST00000475329 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
TRAF4-210ENST00000475329 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
TRAF4-210ENST00000475329 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
TRAF4-210ENST00000475329 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
TRAF4-210ENST00000475329 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
TRAF4-210ENST00000475329 HTATSF1O43719 755 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms