RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 SLC15A2Q16348 729 aa19.42■□□□□ 0.7
RTN4R-206ENST00000474642 TXNRD1Q16881 649 aa19.42■□□□□ 0.7
RTN4R-206ENST00000474642 MARCH10Q8NA82 808 aaPredicted RBP19.42■□□□□ 0.7
RTN4R-206ENST00000474642 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
RTN4R-206ENST00000474642 UTRNP46939 3433 aa19.41■□□□□ 0.7
RTN4R-206ENST00000474642 MTFR1LQ9H019 292 aa19.41■□□□□ 0.7
RTN4R-206ENST00000474642 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
RTN4R-206ENST00000474642 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
RTN4R-206ENST00000474642 NLRP6P59044 892 aa19.39■□□□□ 0.69
RTN4R-206ENST00000474642 CDCA7Q9BWT1 371 aaPredicted RBP19.39■□□□□ 0.69
RTN4R-206ENST00000474642 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
RTN4R-206ENST00000474642 BCL9O00512 1426 aa19.37■□□□□ 0.69
RTN4R-206ENST00000474642 PPIP5K1Q6PFW1 1433 aa19.37■□□□□ 0.69
RTN4R-206ENST00000474642 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
RTN4R-206ENST00000474642 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
RTN4R-206ENST00000474642 ARXQ96QS3 562 aa19.36■□□□□ 0.69
RTN4R-206ENST00000474642 SGIP1Q9BQI5 828 aa19.36■□□□□ 0.69
RTN4R-206ENST00000474642 AKAP12Q02952 1782 aa19.36■□□□□ 0.69
RTN4R-206ENST00000474642 GPR162Q16538 588 aa19.35■□□□□ 0.69
RTN4R-206ENST00000474642 EXOC5O00471 708 aa19.34■□□□□ 0.69
RTN4R-206ENST00000474642 CSB-PGBD3P0DP91 1061 aa19.34■□□□□ 0.69
RTN4R-206ENST00000474642 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
RTN4R-206ENST00000474642 GIGYF1O75420 1035 aaPredicted RBP19.33■□□□□ 0.68
RTN4R-206ENST00000474642 CABP2Q9NPB3 220 aa19.33■□□□□ 0.68
RTN4R-206ENST00000474642 WNK3Q9BYP7 1800 aa19.32■□□□□ 0.68
RTN4R-206ENST00000474642 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
RTN4R-206ENST00000474642 CARD10Q9BWT7 1032 aa19.31■□□□□ 0.68
RTN4R-206ENST00000474642 SLIT3O75094 1523 aa19.3■□□□□ 0.68
RTN4R-206ENST00000474642 COL18A1P39060 1754 aa19.3■□□□□ 0.68
RTN4R-206ENST00000474642 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
RTN4R-206ENST00000474642 USP6P35125 1406 aa19.3■□□□□ 0.68
RTN4R-206ENST00000474642 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
RTN4R-206ENST00000474642 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
RTN4R-206ENST00000474642 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
RTN4R-206ENST00000474642 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
RTN4R-206ENST00000474642 ACSBG1Q96GR2 724 aa19.28■□□□□ 0.68
RTN4R-206ENST00000474642 CPSF1Q10570 1443 aaKnown RBP19.27■□□□□ 0.68
RTN4R-206ENST00000474642 SOX12O15370 315 aa19.27■□□□□ 0.68
RTN4R-206ENST00000474642 ARHGEF25Q86VW2 580 aa19.27■□□□□ 0.68
RTN4R-206ENST00000474642 CENPJQ9HC77 1338 aaPredicted RBP19.26■□□□□ 0.67
RTN4R-206ENST00000474642 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
RTN4R-206ENST00000474642 RGPD5Q99666 1765 aa19.25■□□□□ 0.67
RTN4R-206ENST00000474642 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
RTN4R-206ENST00000474642 CCDC7Q96M83 1385 aa19.24■□□□□ 0.67
RTN4R-206ENST00000474642 POLD1P28340 1107 aa19.23■□□□□ 0.67
RTN4R-206ENST00000474642 TNS2Q63HR2 1409 aa19.23■□□□□ 0.67
RTN4R-206ENST00000474642 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
RTN4R-206ENST00000474642 PIK3C2AO00443 1686 aa19.22■□□□□ 0.67
RTN4R-206ENST00000474642 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
RTN4R-206ENST00000474642 ZNF827Q17R98 1081 aa19.22■□□□□ 0.67
RTN4R-206ENST00000474642 SLC16A10Q8TF71 515 aa19.21■□□□□ 0.67
RTN4R-206ENST00000474642 TTC21BQ7Z4L5 1316 aa19.2■□□□□ 0.66
RTN4R-206ENST00000474642 PAPPAQ13219 1627 aa19.19■□□□□ 0.66
RTN4R-206ENST00000474642 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
RTN4R-206ENST00000474642 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
RTN4R-206ENST00000474642 LRRC4BQ9NT99 713 aa19.18■□□□□ 0.66
RTN4R-206ENST00000474642 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
RTN4R-206ENST00000474642 BTAF1O14981 1849 aa19.17■□□□□ 0.66
RTN4R-206ENST00000474642 NLRP2Q9NX02 1062 aa19.17■□□□□ 0.66
RTN4R-206ENST00000474642 IL2RBP14784 551 aa19.16■□□□□ 0.66
RTN4R-206ENST00000474642 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
RTN4R-206ENST00000474642 CEP350Q5VT06 3117 aa19.16■□□□□ 0.66
RTN4R-206ENST00000474642 EVC2Q86UK5 1308 aa19.16■□□□□ 0.66
RTN4R-206ENST00000474642 TTC21AQ8NDW8 1320 aa19.16■□□□□ 0.66
RTN4R-206ENST00000474642 ABCC6O95255 1503 aa19.15■□□□□ 0.66
RTN4R-206ENST00000474642 GRIN3BO60391 1043 aa19.15■□□□□ 0.66
RTN4R-206ENST00000474642 NLGN2Q8NFZ4 835 aa19.15■□□□□ 0.66
RTN4R-206ENST00000474642 SHANK3Q9BYB0 1731 aa19.14■□□□□ 0.66
RTN4R-206ENST00000474642 SLC27A3Q5K4L6 730 aa19.14■□□□□ 0.65
RTN4R-206ENST00000474642 TFCP2L1Q9NZI6 479 aa19.14■□□□□ 0.65
RTN4R-206ENST00000474642 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
RTN4R-206ENST00000474642 NFAT5O94916 1531 aa19.12■□□□□ 0.65
RTN4R-206ENST00000474642 GOLGB1Q14789 3259 aaKnown RBP19.11■□□□□ 0.65
RTN4R-206ENST00000474642 ERBB3P21860 1342 aa19.11■□□□□ 0.65
RTN4R-206ENST00000474642 YBX3P16989 372 aaKnown RBP eCLIP19.1■□□□□ 0.65
RTN4R-206ENST00000474642 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
RTN4R-206ENST00000474642 QSER1Q2KHR3 1735 aa19.09■□□□□ 0.65
RTN4R-206ENST00000474642 KCNQ4P56696 695 aa19.08■□□□□ 0.64
RTN4R-206ENST00000474642 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.64
RTN4R-206ENST00000474642 MSH5O43196 834 aa19.07■□□□□ 0.64
RTN4R-206ENST00000474642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.64
RTN4R-206ENST00000474642 ANKRD24Q8TF21 1146 aa19.07■□□□□ 0.64
RTN4R-206ENST00000474642 SYTL4Q96C24 671 aaPredicted RBP19.07■□□□□ 0.64
RTN4R-206ENST00000474642 GPBP1L1Q9HC44 474 aaPredicted RBP19.07■□□□□ 0.64
RTN4R-206ENST00000474642 COL24A1Q17RW2 1714 aa19.07■□□□□ 0.64
RTN4R-206ENST00000474642 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
RTN4R-206ENST00000474642 HSPA6P17066 643 aa19.05■□□□□ 0.64
RTN4R-206ENST00000474642 TUBGCP6Q96RT7 1819 aa19.04■□□□□ 0.64
RTN4R-206ENST00000474642 PRIM1P49642 420 aaKnown RBP19.02■□□□□ 0.64
RTN4R-206ENST00000474642 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
RTN4R-206ENST00000474642 NME9Q86XW9 330 aa19.01■□□□□ 0.63
RTN4R-206ENST00000474642 ZNF526Q8TF50 670 aaPredicted RBP19.01■□□□□ 0.63
RTN4R-206ENST00000474642 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
RTN4R-206ENST00000474642 LTN1O94822 1766 aa19.01■□□□□ 0.63
RTN4R-206ENST00000474642 MSL1Q68DK7 614 aa19■□□□□ 0.63
RTN4R-206ENST00000474642 COL23A1Q86Y22 540 aaPredicted RBP19■□□□□ 0.63
RTN4R-206ENST00000474642 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
RTN4R-206ENST00000474642 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
RTN4R-206ENST00000474642 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
RTN4R-206ENST00000474642 MON2Q7Z3U7 1717 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms