RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 RGPD3A6NKT7 1758 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-223ENST00000473345 RGPD4Q7Z3J3 1758 aa14.01□□□□□ -0.17
MCF2L-223ENST00000473345 CPSF1Q10570 1443 aaKnown RBP14.01□□□□□ -0.17
MCF2L-223ENST00000473345 ARHGEF25Q86VW2 580 aa14.01□□□□□ -0.17
MCF2L-223ENST00000473345 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
MCF2L-223ENST00000473345 MYOM1P52179 1685 aa14.01□□□□□ -0.17
MCF2L-223ENST00000473345 NFAT5O94916 1531 aa14□□□□□ -0.17
MCF2L-223ENST00000473345 WDR17Q8IZU2 1322 aa14□□□□□ -0.17
MCF2L-223ENST00000473345 ZBTB7AO95365 584 aa14□□□□□ -0.17
MCF2L-223ENST00000473345 DDB1Q16531 1140 aa14□□□□□ -0.17
MCF2L-223ENST00000473345 TOM1L2Q6ZVM7 507 aa14□□□□□ -0.17
MCF2L-223ENST00000473345 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
MCF2L-223ENST00000473345 NINLQ9Y2I6 1382 aa13.99□□□□□ -0.17
MCF2L-223ENST00000473345 TTC21BQ7Z4L5 1316 aa13.99□□□□□ -0.17
MCF2L-223ENST00000473345 SOX12O15370 315 aa13.99□□□□□ -0.17
MCF2L-223ENST00000473345 L3MBTL2Q969R5 705 aa13.99□□□□□ -0.17
MCF2L-223ENST00000473345 BCL9O00512 1426 aa13.98□□□□□ -0.17
MCF2L-223ENST00000473345 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-223ENST00000473345 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
MCF2L-223ENST00000473345 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-223ENST00000473345 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-223ENST00000473345 TXNRD1Q16881 649 aa13.96□□□□□ -0.17
MCF2L-223ENST00000473345 SIN3AQ96ST3 1273 aa13.96□□□□□ -0.17
MCF2L-223ENST00000473345 TRPM1Q7Z4N2 1603 aa13.96□□□□□ -0.17
MCF2L-223ENST00000473345 AKAP12Q02952 1782 aa13.96□□□□□ -0.18
MCF2L-223ENST00000473345 CARD10Q9BWT7 1032 aa13.95□□□□□ -0.18
MCF2L-223ENST00000473345 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
MCF2L-223ENST00000473345 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
MCF2L-223ENST00000473345 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
MCF2L-223ENST00000473345 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
MCF2L-223ENST00000473345 TNS2Q63HR2 1409 aa13.92□□□□□ -0.18
MCF2L-223ENST00000473345 FHDC1Q9C0D6 1143 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-223ENST00000473345 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
MCF2L-223ENST00000473345 C11orf95C9JLR9 678 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-223ENST00000473345 ZNF827Q17R98 1081 aa13.91□□□□□ -0.18
MCF2L-223ENST00000473345 NME9Q86XW9 330 aa13.91□□□□□ -0.18
MCF2L-223ENST00000473345 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
MCF2L-223ENST00000473345 LRRC4BQ9NT99 713 aa13.91□□□□□ -0.18
MCF2L-223ENST00000473345 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
MCF2L-223ENST00000473345 CSB-PGBD3P0DP91 1061 aa13.9□□□□□ -0.18
MCF2L-223ENST00000473345 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-223ENST00000473345 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
MCF2L-223ENST00000473345 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.18
MCF2L-223ENST00000473345 EXOC5O00471 708 aa13.89□□□□□ -0.19
MCF2L-223ENST00000473345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
MCF2L-223ENST00000473345 ABCC6O95255 1503 aa13.89□□□□□ -0.19
MCF2L-223ENST00000473345 ERBB3P21860 1342 aa13.89□□□□□ -0.19
MCF2L-223ENST00000473345 TTC21AQ8NDW8 1320 aa13.89□□□□□ -0.19
MCF2L-223ENST00000473345 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
MCF2L-223ENST00000473345 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
MCF2L-223ENST00000473345 KCNH5Q8NCM2 988 aa13.88□□□□□ -0.19
MCF2L-223ENST00000473345 CDCA7Q9BWT1 371 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-223ENST00000473345 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
MCF2L-223ENST00000473345 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
MCF2L-223ENST00000473345 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
MCF2L-223ENST00000473345 CCDC7Q96M83 1385 aa13.87□□□□□ -0.19
MCF2L-223ENST00000473345 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-223ENST00000473345 UTRNP46939 3433 aa13.87□□□□□ -0.19
MCF2L-223ENST00000473345 BTAF1O14981 1849 aa13.86□□□□□ -0.19
MCF2L-223ENST00000473345 KCNQ4P56696 695 aa13.86□□□□□ -0.19
MCF2L-223ENST00000473345 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
MCF2L-223ENST00000473345 FBLN1P23142 703 aa13.85□□□□□ -0.19
MCF2L-223ENST00000473345 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
MCF2L-223ENST00000473345 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
MCF2L-223ENST00000473345 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
MCF2L-223ENST00000473345 LTN1O94822 1766 aa13.83□□□□□ -0.19
MCF2L-223ENST00000473345 ANKRD24Q8TF21 1146 aa13.83□□□□□ -0.2
MCF2L-223ENST00000473345 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
MCF2L-223ENST00000473345 NSD2O96028 1365 aa13.83□□□□□ -0.2
MCF2L-223ENST00000473345 IL2RBP14784 551 aa13.82□□□□□ -0.2
MCF2L-223ENST00000473345 ARXQ96QS3 562 aa13.82□□□□□ -0.2
MCF2L-223ENST00000473345 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
MCF2L-223ENST00000473345 A0A1W2PP64 1363 aa13.81□□□□□ -0.2
MCF2L-223ENST00000473345 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
MCF2L-223ENST00000473345 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
MCF2L-223ENST00000473345 COL24A1Q17RW2 1714 aa13.8□□□□□ -0.2
MCF2L-223ENST00000473345 MAP3K5Q99683 1374 aa13.8□□□□□ -0.2
MCF2L-223ENST00000473345 SHANK3Q9BYB0 1731 aa13.79□□□□□ -0.2
MCF2L-223ENST00000473345 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
MCF2L-223ENST00000473345 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
MCF2L-223ENST00000473345 EDC4Q6P2E9 1401 aaKnown RBP13.78□□□□□ -0.2
MCF2L-223ENST00000473345 MEGF6O75095 1541 aa13.77□□□□□ -0.21
MCF2L-223ENST00000473345 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
MCF2L-223ENST00000473345 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
MCF2L-223ENST00000473345 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-223ENST00000473345 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
MCF2L-223ENST00000473345 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
MCF2L-223ENST00000473345 IP6K1Q92551 441 aa13.76□□□□□ -0.21
MCF2L-223ENST00000473345 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
MCF2L-223ENST00000473345 MAP3K19Q56UN5 1328 aa13.75□□□□□ -0.21
MCF2L-223ENST00000473345 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
MCF2L-223ENST00000473345 TESK2Q96S53 571 aa13.75□□□□□ -0.21
MCF2L-223ENST00000473345 QSER1Q2KHR3 1735 aa13.75□□□□□ -0.21
MCF2L-223ENST00000473345 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
MCF2L-223ENST00000473345 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
MCF2L-223ENST00000473345 LY75O60449 1722 aa13.73□□□□□ -0.21
MCF2L-223ENST00000473345 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
MCF2L-223ENST00000473345 CHD4Q14839 1912 aa13.73□□□□□ -0.21
MCF2L-223ENST00000473345 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
MCF2L-223ENST00000473345 HOXC9P31274 260 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms