RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 C1orf115Q9H7X2 142 aa17.47■□□□□ 0.39
ABCF3-210ENST00000473311 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-210ENST00000473311 RBM25P49756 843 aaKnown RBP17.46■□□□□ 0.39
ABCF3-210ENST00000473311 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.38
ABCF3-210ENST00000473311 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
ABCF3-210ENST00000473311 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-210ENST00000473311 TRAK2O60296 914 aa17.45■□□□□ 0.38
ABCF3-210ENST00000473311 VAMP4O75379 141 aa17.45■□□□□ 0.38
ABCF3-210ENST00000473311 BRPF1P55201 1214 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-210ENST00000473311 TSPYL6Q8N831 410 aa17.45■□□□□ 0.38
ABCF3-210ENST00000473311 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
ABCF3-210ENST00000473311 CHMP4BQ9H444 224 aaKnown RBP17.44■□□□□ 0.38
ABCF3-210ENST00000473311 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
ABCF3-210ENST00000473311 BMP2KLQ5H9B9 411 aa17.44■□□□□ 0.38
ABCF3-210ENST00000473311 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
ABCF3-210ENST00000473311 GNAI1P63096 354 aa17.43■□□□□ 0.38
ABCF3-210ENST00000473311 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
ABCF3-210ENST00000473311 PRDM4Q9UKN5 801 aa17.43■□□□□ 0.38
ABCF3-210ENST00000473311 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
ABCF3-210ENST00000473311 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
ABCF3-210ENST00000473311 XRCC6P12956 609 aaKnown RBP eCLIP17.43■□□□□ 0.38
ABCF3-210ENST00000473311 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
ABCF3-210ENST00000473311 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
ABCF3-210ENST00000473311 SNX21Q969T3 373 aa17.42■□□□□ 0.38
ABCF3-210ENST00000473311 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
ABCF3-210ENST00000473311 ATP7BP35670 1465 aa17.42■□□□□ 0.38
ABCF3-210ENST00000473311 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
ABCF3-210ENST00000473311 DDX11L8A8MPP1 907 aa17.41■□□□□ 0.38
ABCF3-210ENST00000473311 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
ABCF3-210ENST00000473311 FSD2A1L4K1 749 aa17.41■□□□□ 0.38
ABCF3-210ENST00000473311 MAP7D2Q96T17 732 aa17.41■□□□□ 0.38
ABCF3-210ENST00000473311 BCL11BQ9C0K0 894 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-210ENST00000473311 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
ABCF3-210ENST00000473311 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
ABCF3-210ENST00000473311 PIK3R4Q99570 1358 aa17.39■□□□□ 0.37
ABCF3-210ENST00000473311 NME9Q86XW9 330 aa17.39■□□□□ 0.37
ABCF3-210ENST00000473311 IL13P35225 146 aa17.39■□□□□ 0.37
ABCF3-210ENST00000473311 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
ABCF3-210ENST00000473311 TBC1D9Q6ZT07 1266 aa17.38■□□□□ 0.37
ABCF3-210ENST00000473311 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
ABCF3-210ENST00000473311 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
ABCF3-210ENST00000473311 ABCC4O15439 1325 aa17.38■□□□□ 0.37
ABCF3-210ENST00000473311 DDIT3P35638 169 aa17.38■□□□□ 0.37
ABCF3-210ENST00000473311 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
ABCF3-210ENST00000473311 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
ABCF3-210ENST00000473311 C8orf58Q8NAV2 365 aa17.37■□□□□ 0.37
ABCF3-210ENST00000473311 TNPO1Q92973 898 aaKnown RBP17.37■□□□□ 0.37
ABCF3-210ENST00000473311 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
ABCF3-210ENST00000473311 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
ABCF3-210ENST00000473311 KIF2CQ99661 725 aa17.36■□□□□ 0.37
ABCF3-210ENST00000473311 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
ABCF3-210ENST00000473311 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
ABCF3-210ENST00000473311 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
ABCF3-210ENST00000473311 DLG5Q8TDM6 1919 aa17.36■□□□□ 0.37
ABCF3-210ENST00000473311 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
ABCF3-210ENST00000473311 RRS1Q15050 365 aaKnown RBP17.35■□□□□ 0.37
ABCF3-210ENST00000473311 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
ABCF3-210ENST00000473311 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-210ENST00000473311 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-210ENST00000473311 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-210ENST00000473311 CD2BP2O95400 341 aaKnown RBP17.34■□□□□ 0.37
ABCF3-210ENST00000473311 MRE11P49959 708 aa17.34■□□□□ 0.37
ABCF3-210ENST00000473311 COG3Q96JB2 828 aa17.34■□□□□ 0.37
ABCF3-210ENST00000473311 GBP4Q96PP9 640 aa17.34■□□□□ 0.37
ABCF3-210ENST00000473311 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
ABCF3-210ENST00000473311 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
ABCF3-210ENST00000473311 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
ABCF3-210ENST00000473311 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
ABCF3-210ENST00000473311 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
ABCF3-210ENST00000473311 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.36
ABCF3-210ENST00000473311 K7ELQ4 463 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-210ENST00000473311 CDC45O75419 566 aa17.32■□□□□ 0.36
ABCF3-210ENST00000473311 RAB3GAP1Q15042 981 aa17.32■□□□□ 0.36
ABCF3-210ENST00000473311 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
ABCF3-210ENST00000473311 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
ABCF3-210ENST00000473311 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
ABCF3-210ENST00000473311 NCKAP5LQ9HCH0 1330 aa17.32■□□□□ 0.36
ABCF3-210ENST00000473311 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
ABCF3-210ENST00000473311 GRPEL1Q9HAV7 217 aa17.31■□□□□ 0.36
ABCF3-210ENST00000473311 ESPNB1AK53 854 aa17.31■□□□□ 0.36
ABCF3-210ENST00000473311 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
ABCF3-210ENST00000473311 SETD1AO15047 1707 aaKnown RBP17.31■□□□□ 0.36
ABCF3-210ENST00000473311 TERF1P54274 439 aa17.3■□□□□ 0.36
ABCF3-210ENST00000473311 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
ABCF3-210ENST00000473311 GSPT1P15170 499 aaKnown RBP17.29■□□□□ 0.36
ABCF3-210ENST00000473311 MLECQ14165 292 aa17.29■□□□□ 0.36
ABCF3-210ENST00000473311 SMAP1Q8IYB5 467 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-210ENST00000473311 CPS1P31327 1500 aa17.29■□□□□ 0.36
ABCF3-210ENST00000473311 PLEKHM2Q8IWE5 1019 aa17.29■□□□□ 0.36
ABCF3-210ENST00000473311 MTERF4Q7Z6M4 381 aaKnown RBP17.28■□□□□ 0.36
ABCF3-210ENST00000473311 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
ABCF3-210ENST00000473311 KNDC1Q76NI1 1749 aa17.28■□□□□ 0.36
ABCF3-210ENST00000473311 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
ABCF3-210ENST00000473311 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.36
ABCF3-210ENST00000473311 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
ABCF3-210ENST00000473311 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.35
ABCF3-210ENST00000473311 METP08581 1390 aa17.27■□□□□ 0.35
ABCF3-210ENST00000473311 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
ABCF3-210ENST00000473311 PTMSP20962 102 aa17.26■□□□□ 0.35
ABCF3-210ENST00000473311 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms