RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 SLC4A5Q9BY07 1137 aa4.2□□□□□ -1.74
TTC3-214ENST00000472398 TBC1D2Q9BYX2 928 aa4.2□□□□□ -1.74
TTC3-214ENST00000472398 TMX4Q9H1E5 349 aaPredicted RBP4.2□□□□□ -1.74
TTC3-214ENST00000472398 PRR12Q9ULL5 1215 aa4.2□□□□□ -1.74
TTC3-214ENST00000472398 ACIN1Q9UKV3 1341 aaKnown RBP4.19□□□□□ -1.74
TTC3-214ENST00000472398 ANP32CO43423 234 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 WDHD1O75717 1129 aaPredicted RBP4.19□□□□□ -1.74
TTC3-214ENST00000472398 RECKO95980 971 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 PTPREP23469 700 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 PTPROQ16827 1216 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 RGL3Q3MIN7 710 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 GIPC2Q8TF65 315 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 KCNB2Q92953 911 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 CDCA7LQ96GN5 454 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 PHOX2BQ99453 314 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 ZNF330Q9Y3S2 320 aaPredicted RBP4.19□□□□□ -1.74
TTC3-214ENST00000472398 KAT6BQ8WYB5 2073 aa4.19□□□□□ -1.74
TTC3-214ENST00000472398 hCG_2014768A0A024R1R8 64 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 TAGLNQ01995 201 aaKnown RBP4.18□□□□□ -1.74
TTC3-214ENST00000472398 AXDND1Q5T1B0 1012 aaPredicted RBP4.18□□□□□ -1.74
TTC3-214ENST00000472398 CCDC146Q8IYE0 955 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 CARD10Q9BWT7 1032 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 FAM198AQ9UFP1 575 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 USTQ9Y2C2 406 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 STK10O94804 968 aaKnown RBP4.18□□□□□ -1.74
TTC3-214ENST00000472398 APPP05067 770 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 LIG1P18858 919 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 CLCN1P35523 988 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 TBX4P57082 545 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 LMOD3Q0VAK6 560 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 CSPP1Q1MSJ5 1256 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 OTUD6BQ8N6M0 293 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 EYA1Q99502 592 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 PIF1Q9H611 641 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 GOPCQ9HD26 462 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.18□□□□□ -1.742e-6■■■■■ 41.9
TTC3-214ENST00000472398 PRDM4Q9UKN5 801 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 COMMD10Q9Y6G5 202 aa4.18□□□□□ -1.74
TTC3-214ENST00000472398 POM121CA8CG34 1229 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 TRIM6-TRIM34B2RNG4 842 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 EIF3JO75822 258 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 PBX2P40425 430 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 WDR78Q5VTH9 848 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 GIGYF2Q6Y7W6 1299 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 NPAS4Q8IUM7 802 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 AMOTL1Q8IY63 956 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 HELBQ8NG08 1087 aaPredicted RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 STAG1Q8WVM7 1258 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 REPIN1Q9BWE0 567 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 BCL2L13Q9BXK5 485 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 GPCPD1Q9NPB8 672 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 MAP3K20Q9NYL2 800 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 KLF15Q9UIH9 416 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 TSKSQ9UJT2 592 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 RFX1P22670 979 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 SRPK2P78362 688 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 SF3A1Q15459 793 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 RPUSD2Q8IZ73 545 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 FBXO9Q9UK97 447 aaPredicted RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 TPX2Q9ULW0 747 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 G3BP2Q9UN86 482 aaKnown RBP4.17□□□□□ -1.74
TTC3-214ENST00000472398 TBX22Q9Y458 520 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 NUB1Q9Y5A7 615 aa4.17□□□□□ -1.74
TTC3-214ENST00000472398 TMEM88BA6NKF7 163 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 IGBP1P78318 339 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 TCEAL1Q15170 157 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 TTC30BQ8N4P2 665 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 PBXIP1Q96AQ6 731 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 CCDC85AQ96PX6 553 aaPredicted RBP4.16□□□□□ -1.74
TTC3-214ENST00000472398 ZBED2Q9BTP6 218 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 FRMD4BQ9Y2L6 1034 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 TMA7Q9Y2S6 64 aaKnown RBP4.16□□□□□ -1.74
TTC3-214ENST00000472398 CTDP1Q9Y5B0 961 aaPredicted RBP4.16□□□□□ -1.74
TTC3-214ENST00000472398 TLDC2A0PJX2 215 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 MS4A1P11836 297 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 POTEEQ6S8J3 1075 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 GLMNQ92990 594 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 RPS6KC1Q96S38 1066 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 FAM217BQ9NTX9 383 aaPredicted RBP4.16□□□□□ -1.74
TTC3-214ENST00000472398 MKRN1Q9UHC7 482 aaKnown RBP4.16□□□□□ -1.74
TTC3-214ENST00000472398 PDZRN3Q9UPQ7 1066 aa4.16□□□□□ -1.74
TTC3-214ENST00000472398 NBPF26B4DH59 902 aa4.15□□□□□ -1.74
TTC3-214ENST00000472398 HOXA2O43364 376 aa4.15□□□□□ -1.74
TTC3-214ENST00000472398 CALRP27797 417 aaKnown RBP4.15□□□□□ -1.74
TTC3-214ENST00000472398 SDE2Q6IQ49 451 aa4.15□□□□□ -1.74
TTC3-214ENST00000472398 ZNF687Q8N1G0 1237 aa4.15□□□□□ -1.74
TTC3-214ENST00000472398 IRF2BPLQ9H1B7 796 aa4.15□□□□□ -1.74
TTC3-214ENST00000472398 ARHGAP33O14559 1287 aa4.15□□□□□ -1.75
TTC3-214ENST00000472398 EMP3P54852 163 aa4.15□□□□□ -1.75
TTC3-214ENST00000472398 MDM2Q00987 491 aaPredicted RBP4.15□□□□□ -1.75
TTC3-214ENST00000472398 TTLL12Q14166 644 aaPredicted RBP4.15□□□□□ -1.75
TTC3-214ENST00000472398 PUS10Q3MIT2 529 aaKnown RBP4.15□□□□□ -1.75
TTC3-214ENST00000472398 CCDC144BQ3MJ40 725 aa4.15□□□□□ -1.75
TTC3-214ENST00000472398 ZNF512BQ96KM6 892 aaPredicted RBP4.15□□□□□ -1.75
TTC3-214ENST00000472398 CALR3Q96L12 384 aaKnown RBP4.15□□□□□ -1.75
TTC3-214ENST00000472398 SENP7Q9BQF6 1050 aa4.15□□□□□ -1.75
TTC3-214ENST00000472398 IGF1RP08069 1367 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 HMGB1P1B2RPK0 211 aaPredicted RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 C3orf80F5H4A9 247 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms