RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 AVPP01185 164 aa6.45□□□□□ -1.38
LRCH3-213ENST00000471667 USP46P62068 366 aa6.45□□□□□ -1.38
LRCH3-213ENST00000471667 MEX3CQ5U5Q3 659 aaKnown RBP6.45□□□□□ -1.38
LRCH3-213ENST00000471667 CRIPAKQ8N1N5 446 aa6.45□□□□□ -1.38
LRCH3-213ENST00000471667 HLA-CQ95604 372 aa6.45□□□□□ -1.38
LRCH3-213ENST00000471667 SHANK2Q9UPX8 1470 aa6.45□□□□□ -1.38
LRCH3-213ENST00000471667 IGF1RP08069 1367 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 TTC24A2A3L6 582 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-213ENST00000471667 WNT7AO00755 349 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 HOXA2O43364 376 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 DXOO77932 396 aaKnown RBP6.44□□□□□ -1.38
LRCH3-213ENST00000471667 RXRBP28702 533 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 TRIM32Q13049 653 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 DACH1Q9UI36 760 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 GOLGA3Q08378 1498 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 UGGT2Q9NYU1 1516 aa6.44□□□□□ -1.38
LRCH3-213ENST00000471667 NPATQ14207 1427 aa6.43□□□□□ -1.38
LRCH3-213ENST00000471667 RICTORQ6R327 1708 aa6.43□□□□□ -1.38
LRCH3-213ENST00000471667 ARID3CA6NKF2 412 aa6.43□□□□□ -1.38
LRCH3-213ENST00000471667 AXIN1O15169 862 aa6.43□□□□□ -1.38
LRCH3-213ENST00000471667 GPCPD1Q9NPB8 672 aa6.43□□□□□ -1.38
LRCH3-213ENST00000471667 RAPGEF2Q9Y4G8 1499 aa6.42□□□□□ -1.38
LRCH3-213ENST00000471667 YY1P25490 414 aa6.42□□□□□ -1.38
LRCH3-213ENST00000471667 CLCN1P35523 988 aa6.42□□□□□ -1.38
LRCH3-213ENST00000471667 CTC1Q2NKJ3 1217 aa6.42□□□□□ -1.38
LRCH3-213ENST00000471667 FAM217BQ9NTX9 383 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-213ENST00000471667 TCOF1Q13428 1488 aaKnown RBP6.41□□□□□ -1.38
LRCH3-213ENST00000471667 SRCAPQ6ZRS2 3230 aa6.41□□□□□ -1.38
LRCH3-213ENST00000471667 ABCA8O94911 1581 aa6.41□□□□□ -1.38
LRCH3-213ENST00000471667 SMCPP49901 116 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-213ENST00000471667 GUCA2AQ02747 115 aa6.41□□□□□ -1.38
LRCH3-213ENST00000471667 CCDC24Q8N4L8 307 aa6.41□□□□□ -1.38
LRCH3-213ENST00000471667 SNIP1Q8TAD8 396 aaKnown RBP6.41□□□□□ -1.38
LRCH3-213ENST00000471667 HECW1Q76N89 1606 aa6.4□□□□□ -1.38
LRCH3-213ENST00000471667 C3P01024 1663 aa6.4□□□□□ -1.38
LRCH3-213ENST00000471667 SENP3-EIF4A1A0A087X0R7 540 aa6.4□□□□□ -1.38
LRCH3-213ENST00000471667 NUTM2BA6NNL0 878 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-213ENST00000471667 NUTM2EB1AL46 878 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-213ENST00000471667 SMPD1P17405 629 aa6.4□□□□□ -1.38
LRCH3-213ENST00000471667 NUTM2DQ5VT03 806 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-213ENST00000471667 NUTM2AQ8IVF1 878 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-213ENST00000471667 KRI1Q8N9T8 703 aaKnown RBP6.4□□□□□ -1.38
LRCH3-213ENST00000471667 MRGPRX2Q96LB1 330 aa6.4□□□□□ -1.38
LRCH3-213ENST00000471667 GMPR2Q9P2T1 348 aaKnown RBP6.4□□□□□ -1.38
LRCH3-213ENST00000471667 RNF17Q9BXT8 1623 aaKnown RBP6.39□□□□□ -1.39
LRCH3-213ENST00000471667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.39□□□□□ -1.39
LRCH3-213ENST00000471667 NUTM1Q86Y26 1132 aa6.39□□□□□ -1.39
LRCH3-213ENST00000471667 SYMPKQ92797 1274 aaKnown RBP6.39□□□□□ -1.39
LRCH3-213ENST00000471667 SCAPERQ9BY12 1400 aa6.39□□□□□ -1.39
LRCH3-213ENST00000471667 CDK12Q9NYV4 1490 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-213ENST00000471667 LRRC7Q96NW7 1537 aa6.39□□□□□ -1.39
LRCH3-213ENST00000471667 PLEKHD1A6NEE1 506 aa6.38□□□□□ -1.39
LRCH3-213ENST00000471667 C11orf95C9JLR9 678 aaPredicted RBP6.38□□□□□ -1.39
LRCH3-213ENST00000471667 J3QL48 77 aa6.38□□□□□ -1.39
LRCH3-213ENST00000471667 JUNDP17535 347 aa6.38□□□□□ -1.39
LRCH3-213ENST00000471667 REPIN1Q9BWE0 567 aaKnown RBP6.38□□□□□ -1.39
LRCH3-213ENST00000471667 SIGLEC1Q9BZZ2 1709 aa6.38□□□□□ -1.39
LRCH3-213ENST00000471667 AGLP35573 1532 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 ATP10BO94823 1461 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 ATAD2Q6PL18 1390 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 JCADQ9P266 1359 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 WNT7BP56706 349 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 SKOR1P84550 965 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 RC3H1Q5TC82 1133 aaKnown RBP6.37□□□□□ -1.39
LRCH3-213ENST00000471667 TREML4Q6UXN2 200 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 RETREG3Q86VR2 466 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 ANKLE2Q86XL3 938 aa6.37□□□□□ -1.39
LRCH3-213ENST00000471667 SUPT6HQ7KZ85 1726 aaKnown RBP6.36□□□□□ -1.39
LRCH3-213ENST00000471667 CEP170BQ9Y4F5 1589 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-213ENST00000471667 FAM135BQ49AJ0 1406 aa6.36□□□□□ -1.39
LRCH3-213ENST00000471667 PCDHGC3Q9UN70 934 aa6.36□□□□□ -1.39
LRCH3-213ENST00000471667 ZMYM3Q14202 1370 aa6.35□□□□□ -1.39
LRCH3-213ENST00000471667 FDX1P10109 184 aa6.35□□□□□ -1.39
LRCH3-213ENST00000471667 SSTR3P32745 418 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-213ENST00000471667 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-213ENST00000471667 CCDC125Q86Z20 511 aa6.35□□□□□ -1.39
LRCH3-213ENST00000471667 HPS1Q92902 700 aa6.35□□□□□ -1.39
LRCH3-213ENST00000471667 NUDT12Q9BQG2 462 aa6.35□□□□□ -1.39
LRCH3-213ENST00000471667 ATP13A2Q9NQ11 1180 aa6.35□□□□□ -1.39
LRCH3-213ENST00000471667 ZNF518AQ6AHZ1 1483 aa6.34□□□□□ -1.39
LRCH3-213ENST00000471667 SPATA31A6Q5VVP1 1343 aa6.34□□□□□ -1.39
LRCH3-213ENST00000471667 ZNF142P52746 1687 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-213ENST00000471667 C6orf229H3BNL8 230 aa6.34□□□□□ -1.39
LRCH3-213ENST00000471667 TTLL12Q14166 644 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-213ENST00000471667 SYNMO15061 1565 aa6.34□□□□□ -1.39
LRCH3-213ENST00000471667 SETBP1Q9Y6X0 1596 aa6.34□□□□□ -1.39
LRCH3-213ENST00000471667 MYO3AQ8NEV4 1616 aa6.33□□□□□ -1.4
LRCH3-213ENST00000471667 ALKQ9UM73 1620 aa6.33□□□□□ -1.4
LRCH3-213ENST00000471667 EFCAB2Q5VUJ9 269 aa6.33□□□□□ -1.4
LRCH3-213ENST00000471667 PTCRAQ6ISU1 281 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-213ENST00000471667 BARGINQ6ZT62 677 aa6.33□□□□□ -1.4
LRCH3-213ENST00000471667 SPIRE2Q8WWL2 714 aa6.33□□□□□ -1.4
LRCH3-213ENST00000471667 NGLY1Q96IV0 654 aa6.33□□□□□ -1.4
LRCH3-213ENST00000471667 CDK13Q14004 1512 aaKnown RBP6.33□□□□□ -1.4
LRCH3-213ENST00000471667 REREQ9P2R6 1566 aa6.32□□□□□ -1.4
LRCH3-213ENST00000471667 WFS1O76024 890 aa6.32□□□□□ -1.4
LRCH3-213ENST00000471667 ALDH1A1P00352 501 aa6.32□□□□□ -1.4
LRCH3-213ENST00000471667 MS4A1P11836 297 aa6.32□□□□□ -1.4
LRCH3-213ENST00000471667 SNRPBP14678 240 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms