RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 PLEKHD1A6NEE1 506 aa8.96□□□□□ -0.98
CHD6-206ENST00000470470 FUT2Q10981 343 aa8.96□□□□□ -0.98
CHD6-206ENST00000470470 CHIC2Q9UKJ5 165 aa8.96□□□□□ -0.98
CHD6-206ENST00000470470 ANKRD30BQ9BXX2 1392 aa8.96□□□□□ -0.98
CHD6-206ENST00000470470 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.98
CHD6-206ENST00000470470 ARHGEF5Q12774 1597 aa8.95□□□□□ -0.98
CHD6-206ENST00000470470 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
CHD6-206ENST00000470470 CFDP1Q9UEE9 299 aaPredicted RBP8.95□□□□□ -0.98
CHD6-206ENST00000470470 PTPRGP23470 1445 aa8.95□□□□□ -0.98
CHD6-206ENST00000470470 RPRD2Q5VT52 1461 aaKnown RBP8.94□□□□□ -0.98
CHD6-206ENST00000470470 CCER2I3L3R5 266 aa8.94□□□□□ -0.98
CHD6-206ENST00000470470 GNPATO15228 680 aa8.94□□□□□ -0.98
CHD6-206ENST00000470470 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
CHD6-206ENST00000470470 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
CHD6-206ENST00000470470 ZNF644Q9H582 1327 aaPredicted RBP8.94□□□□□ -0.98
CHD6-206ENST00000470470 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
CHD6-206ENST00000470470 FAM160A2Q8N612 972 aaPredicted RBP8.93□□□□□ -0.98
CHD6-206ENST00000470470 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
CHD6-206ENST00000470470 ANKRD30AQ9BXX3 1397 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 ZBTB24O43167 697 aaPredicted RBP8.92□□□□□ -0.98
CHD6-206ENST00000470470 ZMYND10O75800 440 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 GCGRP47871 477 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 KRI1Q8N9T8 703 aaKnown RBP8.92□□□□□ -0.98
CHD6-206ENST00000470470 SLC27A5Q9Y2P5 690 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 PZPP20742 1482 aa8.92□□□□□ -0.98
CHD6-206ENST00000470470 KDM5DQ9BY66 1539 aa8.91□□□□□ -0.98
CHD6-206ENST00000470470 ARID3CA6NKF2 412 aa8.91□□□□□ -0.98
CHD6-206ENST00000470470 YTHDC1Q96MU7 727 aaKnown RBP8.91□□□□□ -0.98
CHD6-206ENST00000470470 POLR1AO95602 1720 aaPredicted RBP8.9□□□□□ -0.98
CHD6-206ENST00000470470 CDC42BPBQ9Y5S2 1711 aa8.9□□□□□ -0.98
CHD6-206ENST00000470470 PREX2Q70Z35 1606 aa8.9□□□□□ -0.98
CHD6-206ENST00000470470 DDX10Q13206 875 aaKnown RBP8.9□□□□□ -0.98
CHD6-206ENST00000470470 BRICD5Q6PL45 260 aa8.9□□□□□ -0.98
CHD6-206ENST00000470470 PRDM9Q9NQV7 894 aa8.9□□□□□ -0.98
CHD6-206ENST00000470470 MAST1Q9Y2H9 1570 aa8.9□□□□□ -0.99
CHD6-206ENST00000470470 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
CHD6-206ENST00000470470 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
CHD6-206ENST00000470470 WNT7AO00755 349 aa8.89□□□□□ -0.99
CHD6-206ENST00000470470 GPR37O15354 613 aa8.89□□□□□ -0.99
CHD6-206ENST00000470470 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
CHD6-206ENST00000470470 KIAA1107Q9UPP5 1409 aa8.89□□□□□ -0.99
CHD6-206ENST00000470470 UHRF1BP1LA0JNW5 1464 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 MBD5Q9P267 1494 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 CLASP1Q7Z460 1538 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 ABCC2Q92887 1545 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 FECHP22830 423 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 BARGINQ6ZT62 677 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 C9orf84Q5VXU9 1444 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 ANKRD50Q9ULJ7 1429 aa8.88□□□□□ -0.99
CHD6-206ENST00000470470 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
CHD6-206ENST00000470470 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
CHD6-206ENST00000470470 ATP13A2Q9NQ11 1180 aa8.87□□□□□ -0.99
CHD6-206ENST00000470470 SAMD9LQ8IVG5 1584 aa8.86□□□□□ -0.99
CHD6-206ENST00000470470 ANP32CO43423 234 aa8.86□□□□□ -0.99
CHD6-206ENST00000470470 SNRPBP14678 240 aaKnown RBP8.86□□□□□ -0.99
CHD6-206ENST00000470470 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
CHD6-206ENST00000470470 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
CHD6-206ENST00000470470 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
CHD6-206ENST00000470470 PLEKHH2Q8IVE3 1493 aa8.86□□□□□ -0.99
CHD6-206ENST00000470470 MYO5CQ9NQX4 1742 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 TSPY4P0CV99 314 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 TSPY10P0CW01 314 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 TRIM32Q13049 653 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 Q3C1V9 767 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 SPATA31E1Q6ZUB1 1445 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 CCDC141Q6ZP82 1450 aa8.85□□□□□ -0.99
CHD6-206ENST00000470470 HSPA5P11021 654 aaKnown RBP8.84□□□□□ -0.99
CHD6-206ENST00000470470 SMPD1P17405 629 aa8.84□□□□□ -0.99
CHD6-206ENST00000470470 MMP16P51512 607 aa8.84□□□□□ -0.99
CHD6-206ENST00000470470 REPIN1Q9BWE0 567 aaKnown RBP8.84□□□□□ -0.99
CHD6-206ENST00000470470 MAP2K5Q13163 448 aa8.83□□□□□ -1
CHD6-206ENST00000470470 UHRF1BP1Q6BDS2 1440 aa8.83□□□□□ -1
CHD6-206ENST00000470470 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
CHD6-206ENST00000470470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.83□□□□□ -1
CHD6-206ENST00000470470 AK7Q96M32 723 aa8.83□□□□□ -1
CHD6-206ENST00000470470 ARHGEF12Q9NZN5 1544 aa8.83□□□□□ -1
CHD6-206ENST00000470470 ZNF777Q9ULD5 760 aaPredicted RBP8.83□□□□□ -1
CHD6-206ENST00000470470 PLXNC1O60486 1568 aa8.83□□□□□ -1
CHD6-206ENST00000470470 NLRP7Q8WX94 980 aa8.82□□□□□ -1
CHD6-206ENST00000470470 UNC13BO14795 1591 aa8.82□□□□□ -1
CHD6-206ENST00000470470 ARAP3Q8WWN8 1544 aa8.82□□□□□ -1
CHD6-206ENST00000470470 WASHC2AQ641Q2 1341 aa8.82□□□□□ -1
CHD6-206ENST00000470470 NBPF8Q3BBV2 869 aa8.81□□□□□ -1
CHD6-206ENST00000470470 PHOX2BQ99453 314 aa8.81□□□□□ -1
CHD6-206ENST00000470470 ERCC6L2Q5T890 1561 aa8.81□□□□□ -1
CHD6-206ENST00000470470 TTC37Q6PGP7 1564 aa8.81□□□□□ -1
CHD6-206ENST00000470470 CCDC7Q96M83 1385 aa8.81□□□□□ -1
CHD6-206ENST00000470470 KIF15Q9NS87 1388 aa8.81□□□□□ -1
CHD6-206ENST00000470470 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
CHD6-206ENST00000470470 KIFC2Q96AC6 838 aa8.8□□□□□ -1
CHD6-206ENST00000470470 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
CHD6-206ENST00000470470 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
CHD6-206ENST00000470470 ZCCHC11Q5TAX3 1644 aaKnown RBP8.8□□□□□ -1
CHD6-206ENST00000470470 PLCH2O75038 1416 aa8.8□□□□□ -1
CHD6-206ENST00000470470 CNTLNQ9NXG0 1405 aa8.8□□□□□ -1
CHD6-206ENST00000470470 NUP155O75694 1391 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms