RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 CLEC17AQ6ZS10 378 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
TPM3-215ENST00000469717 NOL8Q76FK4 1167 aaKnown RBP9.78□□□□□ -0.84
TPM3-215ENST00000469717 GDPD2Q9HCC8 539 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 UGGT1Q9NYU2 1555 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 CCDC27Q2M243 656 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 CCDC94Q9BW85 323 aaPredicted RBP9.77□□□□□ -0.85
TPM3-215ENST00000469717 DMTNQ08495 405 aa9.77□□□□□ -0.85
TPM3-215ENST00000469717 ATP10AO60312 1499 aa9.77□□□□□ -0.85
TPM3-215ENST00000469717 ZNF518AQ6AHZ1 1483 aa9.77□□□□□ -0.85
TPM3-215ENST00000469717 PTPRTO14522 1441 aa9.77□□□□□ -0.85
TPM3-215ENST00000469717 PTMSP20962 102 aa9.77□□□□□ -0.85
TPM3-215ENST00000469717 HS1BP3Q53T59 392 aa9.77□□□□□ -0.85
TPM3-215ENST00000469717 TTC12Q9H892 705 aaPredicted RBP9.77□□□□□ -0.85
TPM3-215ENST00000469717 MAST1Q9Y2H9 1570 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 NOS1P29475 1434 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 FBLN1P23142 703 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 DTNBO60941 627 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 CHMP4AQ9BY43 222 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
TPM3-215ENST00000469717 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 SPHKAPQ2M3C7 1700 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
TPM3-215ENST00000469717 CDC45O75419 566 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 GGNBP2Q9H3C7 697 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 CCDC39Q9UFE4 941 aa9.75□□□□□ -0.85
TPM3-215ENST00000469717 DHX37Q8IY37 1157 aaKnown RBP9.74□□□□□ -0.85
TPM3-215ENST00000469717 PLEKHF1Q96S99 279 aa9.74□□□□□ -0.85
TPM3-215ENST00000469717 NUCB2P80303 420 aa9.74□□□□□ -0.85
TPM3-215ENST00000469717 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
TPM3-215ENST00000469717 PREX2Q70Z35 1606 aa9.74□□□□□ -0.85
TPM3-215ENST00000469717 SMARCA5O60264 1052 aaPredicted RBP9.74□□□□□ -0.85
TPM3-215ENST00000469717 USP25Q9UHP3 1055 aa9.74□□□□□ -0.85
TPM3-215ENST00000469717 SRPK2P78362 688 aaKnown RBP9.73□□□□□ -0.85
TPM3-215ENST00000469717 KIAA2012Q0VF49 1180 aa9.73□□□□□ -0.85
TPM3-215ENST00000469717 MYRIPQ8NFW9 859 aa9.73□□□□□ -0.85
TPM3-215ENST00000469717 USP26Q9BXU7 913 aa9.73□□□□□ -0.85
TPM3-215ENST00000469717 ZBTB22O15209 634 aa9.73□□□□□ -0.85
TPM3-215ENST00000469717 GADD45BO75293 160 aaPredicted RBP9.73□□□□□ -0.85
TPM3-215ENST00000469717 PLEKHM2Q8IWE5 1019 aa9.73□□□□□ -0.85
TPM3-215ENST00000469717 RABEP1Q15276 862 aa9.73□□□□□ -0.85
TPM3-215ENST00000469717 CEBPAP49715 358 aaPredicted RBP9.72□□□□□ -0.85
TPM3-215ENST00000469717 DUOX2Q9NRD8 1548 aa9.72□□□□□ -0.85
TPM3-215ENST00000469717 PLCB2Q00722 1185 aa9.72□□□□□ -0.85
TPM3-215ENST00000469717 CABP2Q9NPB3 220 aa9.72□□□□□ -0.85
TPM3-215ENST00000469717 NAP1L2Q9ULW6 460 aaPredicted RBP9.72□□□□□ -0.85
TPM3-215ENST00000469717 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
TPM3-215ENST00000469717 IPO8O15397 1037 aaKnown RBP9.72□□□□□ -0.85
TPM3-215ENST00000469717 U2AF2P26368 475 aaKnown RBP eCLIP9.72□□□□□ -0.855e-7■■■■□ 22.9
TPM3-215ENST00000469717 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.85
TPM3-215ENST00000469717 TRAPPC8Q9Y2L5 1435 aa9.71□□□□□ -0.86
TPM3-215ENST00000469717 TSHZ3Q63HK5 1081 aa9.71□□□□□ -0.86
TPM3-215ENST00000469717 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.86
TPM3-215ENST00000469717 BCL2L12Q9HB09 334 aa9.71□□□□□ -0.86
TPM3-215ENST00000469717 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
TPM3-215ENST00000469717 GCC1Q96CN9 775 aa9.7□□□□□ -0.86
TPM3-215ENST00000469717 SDSP20132 328 aa9.7□□□□□ -0.86
TPM3-215ENST00000469717 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
TPM3-215ENST00000469717 CT47B1P0C2W7 299 aaPredicted RBP9.7□□□□□ -0.86
TPM3-215ENST00000469717 MAPK8IP2Q13387 824 aaPredicted RBP9.7□□□□□ -0.86
TPM3-215ENST00000469717 TSPY26PQ9H489 355 aa9.7□□□□□ -0.86
TPM3-215ENST00000469717 ABCC11Q96J66 1382 aa9.7□□□□□ -0.86
TPM3-215ENST00000469717 ARHGAP31Q2M1Z3 1444 aa9.7□□□□□ -0.86
TPM3-215ENST00000469717 TRPM2O94759 1503 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 MCM5P33992 734 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 UTP14CQ5TAP6 766 aaKnown RBP9.69□□□□□ -0.86
TPM3-215ENST00000469717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■□□□□ 8.5
TPM3-215ENST00000469717 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
TPM3-215ENST00000469717 NEK4P51957 841 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 TTC22Q5TAA0 569 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 TCHHQ07283 1943 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 ADGRB2O60241 1585 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 VGLL3A8MV65 326 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 HCLS1P14317 486 aaPredicted RBP9.69□□□□□ -0.86
TPM3-215ENST00000469717 KRT24Q2M2I5 525 aa9.69□□□□□ -0.86
TPM3-215ENST00000469717 HMOX1P09601 288 aa9.68□□□□□ -0.86
TPM3-215ENST00000469717 TMX3Q96JJ7 454 aa9.68□□□□□ -0.86
TPM3-215ENST00000469717 ST18O60284 1047 aa9.68□□□□□ -0.86
TPM3-215ENST00000469717 ADCY5O95622 1261 aa9.68□□□□□ -0.86
TPM3-215ENST00000469717 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
TPM3-215ENST00000469717 PIBF1Q8WXW3 757 aa9.68□□□□□ -0.86
TPM3-215ENST00000469717 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
TPM3-215ENST00000469717 VAMP4O75379 141 aa9.67□□□□□ -0.86
TPM3-215ENST00000469717 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
TPM3-215ENST00000469717 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
TPM3-215ENST00000469717 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
TPM3-215ENST00000469717 NAA30Q147X3 362 aaPredicted RBP9.67□□□□□ -0.86
TPM3-215ENST00000469717 PYCARDQ9ULZ3 195 aa9.67□□□□□ -0.86
TPM3-215ENST00000469717 CFAP65Q6ZU64 1925 aaKnown RBP9.67□□□□□ -0.86
TPM3-215ENST00000469717 AP5Z1O43299 807 aa9.67□□□□□ -0.86
TPM3-215ENST00000469717 SPC24Q8NBT2 197 aa9.67□□□□□ -0.86
TPM3-215ENST00000469717 UPF3BQ9BZI7 483 aaKnown RBP9.67□□□□□ -0.86
TPM3-215ENST00000469717 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
TPM3-215ENST00000469717 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 671.3 ms