RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 DDRGK1Q96HY6 314 aa6.46□□□□□ -1.38
SF3B1-207ENST00000468925 KCNH2Q12809 1159 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 IL27Q8NEV9 243 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 AK7Q96M32 723 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 SLC24A3Q9HC58 644 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 MAP10Q9P2G4 905 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 GOLGA3Q08378 1498 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 CEP164Q9UPV0 1460 aa6.45□□□□□ -1.38
SF3B1-207ENST00000468925 H3BM21 787 aa6.44□□□□□ -1.38
SF3B1-207ENST00000468925 SIAH2O43255 324 aa6.44□□□□□ -1.38
SF3B1-207ENST00000468925 NEFMP07197 916 aa6.44□□□□□ -1.38
SF3B1-207ENST00000468925 PDIA4P13667 645 aaKnown RBP6.44□□□□□ -1.38
SF3B1-207ENST00000468925 ZNF326Q5BKZ1 582 aaKnown RBP6.44□□□□□ -1.38
SF3B1-207ENST00000468925 TMEM151AQ8N4L1 468 aa6.44□□□□□ -1.38
SF3B1-207ENST00000468925 EVA1BQ9NVM1 165 aa6.44□□□□□ -1.38
SF3B1-207ENST00000468925 CENPJQ9HC77 1338 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-207ENST00000468925 PDE4DQ08499 809 aa6.43□□□□□ -1.38
SF3B1-207ENST00000468925 RIC3Q7Z5B4 369 aa6.43□□□□□ -1.38
SF3B1-207ENST00000468925 ZNF511Q8NB15 262 aa6.43□□□□□ -1.38
SF3B1-207ENST00000468925 PSMG3-AS1Q96PY0 264 aa6.43□□□□□ -1.38
SF3B1-207ENST00000468925 LIMD1Q9UGP4 676 aa6.43□□□□□ -1.38
SF3B1-207ENST00000468925 UNC13AQ9UPW8 1703 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 NUTM2BA6NNL0 878 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-207ENST00000468925 NUTM2EB1AL46 878 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-207ENST00000468925 CAPN5O15484 640 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-207ENST00000468925 PER1O15534 1290 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-207ENST00000468925 GDF11O95390 407 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 ITGAEP38570 1179 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 VEGFBP49765 207 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 RASSF7Q02833 373 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 ARID5BQ14865 1188 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 QPCTQ16769 361 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 NUTM2DQ5VT03 806 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-207ENST00000468925 NUTM2AQ8IVF1 878 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-207ENST00000468925 FOXJ1Q92949 421 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 ZBTB3Q9H5J0 574 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 CC2D2AQ9P2K1 1620 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 VPS8Q8N3P4 1428 aa6.42□□□□□ -1.38
SF3B1-207ENST00000468925 SPDYE5A6NIY4 337 aa6.41□□□□□ -1.38
SF3B1-207ENST00000468925 SPTLC1O15269 473 aa6.41□□□□□ -1.38
SF3B1-207ENST00000468925 HSP90AA2PQ14568 343 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-207ENST00000468925 AGERQ15109 404 aa6.41□□□□□ -1.38
SF3B1-207ENST00000468925 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
SF3B1-207ENST00000468925 BAZ1BQ9UIG0 1483 aaKnown RBP6.41□□□□□ -1.38
SF3B1-207ENST00000468925 BICRAQ9NZM4 1560 aa6.4□□□□□ -1.38
SF3B1-207ENST00000468925 TCERG1O14776 1098 aaKnown RBP6.4□□□□□ -1.38
SF3B1-207ENST00000468925 PPP1R15AO75807 674 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-207ENST00000468925 HSP90AA1P07900 732 aaKnown RBP6.4□□□□□ -1.38
SF3B1-207ENST00000468925 NNTQ13423 1086 aa6.4□□□□□ -1.38
SF3B1-207ENST00000468925 L1TD1Q5T7N2 865 aaKnown RBP6.4□□□□□ -1.38
SF3B1-207ENST00000468925 MYSM1Q5VVJ2 828 aa6.4□□□□□ -1.38
SF3B1-207ENST00000468925 LYPD8Q6UX82 237 aa6.4□□□□□ -1.38
SF3B1-207ENST00000468925 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.38
SF3B1-207ENST00000468925 DIXDC1Q155Q3 683 aa6.39□□□□□ -1.39
SF3B1-207ENST00000468925 ATP1B4Q9UN42 357 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-207ENST00000468925 ARID3CA6NKF2 412 aa6.38□□□□□ -1.39
SF3B1-207ENST00000468925 IGSF3O75054 1194 aa6.38□□□□□ -1.39
SF3B1-207ENST00000468925 WDR4P57081 412 aaKnown RBP6.38□□□□□ -1.39
SF3B1-207ENST00000468925 DESI1Q6ICB0 168 aa6.38□□□□□ -1.39
SF3B1-207ENST00000468925 MAP7D2Q96T17 732 aa6.38□□□□□ -1.39
SF3B1-207ENST00000468925 SMARCA2P51531 1590 aa6.38□□□□□ -1.39
SF3B1-207ENST00000468925 KIF21BO75037 1637 aa6.37□□□□□ -1.39
SF3B1-207ENST00000468925 NCAPD3P42695 1498 aa6.37□□□□□ -1.39
SF3B1-207ENST00000468925 ARID4BQ4LE39 1312 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-207ENST00000468925 SOBPA7XYQ1 873 aa6.37□□□□□ -1.39
SF3B1-207ENST00000468925 F12P00748 615 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-207ENST00000468925 VARSP26640 1264 aaKnown RBP6.37□□□□□ -1.39
SF3B1-207ENST00000468925 FGD1P98174 961 aa6.37□□□□□ -1.39
SF3B1-207ENST00000468925 RRBP1Q9P2E9 1410 aaKnown RBP6.36□□□□□ -1.39
SF3B1-207ENST00000468925 ZBED9Q6R2W3 1325 aa6.36□□□□□ -1.39
SF3B1-207ENST00000468925 PLEKHG3A1L390 1219 aa6.36□□□□□ -1.39
SF3B1-207ENST00000468925 CALD1Q05682 793 aaKnown RBP6.36□□□□□ -1.39
SF3B1-207ENST00000468925 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
SF3B1-207ENST00000468925 FAM174AQ8TBP5 190 aa6.36□□□□□ -1.39
SF3B1-207ENST00000468925 ZFP42Q96MM3 310 aa6.36□□□□□ -1.39
SF3B1-207ENST00000468925 PURBQ96QR8 312 aaKnown RBP6.36□□□□□ -1.39
SF3B1-207ENST00000468925 PDCL3Q9H2J4 239 aa6.36□□□□□ -1.39
SF3B1-207ENST00000468925 NACADO15069 1562 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 MAGEB6P1A0A0J9YX57 407 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 APBB1O00213 710 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 TPM2P07951 284 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 TIMP2P16035 220 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 GJA5P36382 358 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 CLK2P49760 499 aaKnown RBP6.35□□□□□ -1.39
SF3B1-207ENST00000468925 PDE4CQ08493 712 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 C6orf118Q5T5N4 469 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 MTERF4Q7Z6M4 381 aaKnown RBP6.35□□□□□ -1.39
SF3B1-207ENST00000468925 CARD14Q9BXL6 1004 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 ZFAND3Q9H8U3 227 aa6.35□□□□□ -1.39
SF3B1-207ENST00000468925 GPBP1L1Q9HC44 474 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-207ENST00000468925 EIF4G1Q04637 1599 aaKnown RBP6.35□□□□□ -1.39
SF3B1-207ENST00000468925 LILRB3O75022 631 aa6.34□□□□□ -1.39
SF3B1-207ENST00000468925 ADH1CP00326 375 aa6.34□□□□□ -1.39
SF3B1-207ENST00000468925 PRPF38BQ5VTL8 546 aaKnown RBP6.34□□□□□ -1.39
SF3B1-207ENST00000468925 ISY1Q9ULR0 285 aaKnown RBP6.34□□□□□ -1.39
SF3B1-207ENST00000468925 IGHA1P01876 353 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 NR3C2P08235 984 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 VSIG8P0DPA2 414 aa6.33□□□□□ -1.4
SF3B1-207ENST00000468925 HNRNPUQ00839 825 aaKnown RBP eCLIP6.33□□□□□ -1.4
SF3B1-207ENST00000468925 DDX10Q13206 875 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms