RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 RGPD3A6NKT7 1758 aaPredicted RBP22.42■■□□□ 1.18
SRRM1-207ENST00000468822 RGPD4Q7Z3J3 1758 aa22.42■■□□□ 1.18
SRRM1-207ENST00000468822 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
SRRM1-207ENST00000468822 MARCH10Q8NA82 808 aaPredicted RBP22.41■■□□□ 1.18
SRRM1-207ENST00000468822 CASZ1Q86V15 1759 aa22.4■■□□□ 1.18
SRRM1-207ENST00000468822 NINLQ9Y2I6 1382 aa22.4■■□□□ 1.18
SRRM1-207ENST00000468822 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
SRRM1-207ENST00000468822 C11orf95C9JLR9 678 aaPredicted RBP22.39■■□□□ 1.17
SRRM1-207ENST00000468822 WDR17Q8IZU2 1322 aa22.38■■□□□ 1.17
SRRM1-207ENST00000468822 WNK3Q9BYP7 1800 aa22.38■■□□□ 1.17
SRRM1-207ENST00000468822 CPSF1Q10570 1443 aaKnown RBP22.37■■□□□ 1.17
SRRM1-207ENST00000468822 ADRA2BP18089 450 aa22.36■■□□□ 1.17
SRRM1-207ENST00000468822 ARHGEF25Q86VW2 580 aa22.36■■□□□ 1.17
SRRM1-207ENST00000468822 BCL9O00512 1426 aa22.35■■□□□ 1.17
SRRM1-207ENST00000468822 ZBTB7AO95365 584 aa22.34■■□□□ 1.17
SRRM1-207ENST00000468822 RGPD5Q99666 1765 aa22.34■■□□□ 1.17
SRRM1-207ENST00000468822 TTC21BQ7Z4L5 1316 aa22.33■■□□□ 1.17
SRRM1-207ENST00000468822 SOX12O15370 315 aa22.33■■□□□ 1.17
SRRM1-207ENST00000468822 PTGER2P43116 358 aa22.33■■□□□ 1.17
SRRM1-207ENST00000468822 MYOM1P52179 1685 aa22.31■■□□□ 1.16
SRRM1-207ENST00000468822 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
SRRM1-207ENST00000468822 CARD10Q9BWT7 1032 aa22.31■■□□□ 1.16
SRRM1-207ENST00000468822 NFAT5O94916 1531 aa22.31■■□□□ 1.16
SRRM1-207ENST00000468822 AKAP12Q02952 1782 aa22.3■■□□□ 1.16
SRRM1-207ENST00000468822 TXNRD1Q16881 649 aa22.3■■□□□ 1.16
SRRM1-207ENST00000468822 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
SRRM1-207ENST00000468822 ATF5Q9Y2D1 282 aaPredicted RBP22.3■■□□□ 1.16
SRRM1-207ENST00000468822 EVC2Q86UK5 1308 aa22.3■■□□□ 1.16
SRRM1-207ENST00000468822 TRPM1Q7Z4N2 1603 aa22.28■■□□□ 1.16
SRRM1-207ENST00000468822 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
SRRM1-207ENST00000468822 KCNH5Q8NCM2 988 aa22.27■■□□□ 1.16
SRRM1-207ENST00000468822 DCAF8L1A6NGE4 600 aa22.26■■□□□ 1.15
SRRM1-207ENST00000468822 SLC15A2Q16348 729 aa22.25■■□□□ 1.15
SRRM1-207ENST00000468822 ZNF692Q9BU19 519 aaPredicted RBP22.25■■□□□ 1.15
SRRM1-207ENST00000468822 TNS2Q63HR2 1409 aa22.24■■□□□ 1.15
SRRM1-207ENST00000468822 GOLGB1Q14789 3259 aaKnown RBP22.24■■□□□ 1.15
SRRM1-207ENST00000468822 EXOC5O00471 708 aa22.24■■□□□ 1.15
SRRM1-207ENST00000468822 STK32BQ9NY57 414 aa22.24■■□□□ 1.15
SRRM1-207ENST00000468822 TTC21AQ8NDW8 1320 aa22.24■■□□□ 1.15
SRRM1-207ENST00000468822 SGIP1Q9BQI5 828 aa22.23■■□□□ 1.15
SRRM1-207ENST00000468822 SIN3AQ96ST3 1273 aa22.22■■□□□ 1.15
SRRM1-207ENST00000468822 FHDC1Q9C0D6 1143 aaPredicted RBP22.22■■□□□ 1.15
SRRM1-207ENST00000468822 KTN1Q86UP2 1357 aaKnown RBP22.22■■□□□ 1.15
SRRM1-207ENST00000468822 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
SRRM1-207ENST00000468822 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
SRRM1-207ENST00000468822 SYT17Q9BSW7 474 aa22.21■■□□□ 1.15
SRRM1-207ENST00000468822 NHSQ6T4R5 1651 aa22.2■■□□□ 1.15
SRRM1-207ENST00000468822 PIAS4Q8N2W9 510 aaPredicted RBP22.19■■□□□ 1.14
SRRM1-207ENST00000468822 ZNF784Q8NCA9 323 aaPredicted RBP22.19■■□□□ 1.14
SRRM1-207ENST00000468822 ROCK2O75116 1388 aaKnown RBP22.19■■□□□ 1.14
SRRM1-207ENST00000468822 ABCC6O95255 1503 aa22.19■■□□□ 1.14
SRRM1-207ENST00000468822 MON2Q7Z3U7 1717 aa22.18■■□□□ 1.14
SRRM1-207ENST00000468822 PAPPAQ13219 1627 aa22.18■■□□□ 1.14
SRRM1-207ENST00000468822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.18■■□□□ 1.14
SRRM1-207ENST00000468822 MTFR1LQ9H019 292 aa22.18■■□□□ 1.14
SRRM1-207ENST00000468822 CD163L1Q9NR16 1453 aa22.17■■□□□ 1.14
SRRM1-207ENST00000468822 ERBB3P21860 1342 aa22.17■■□□□ 1.14
SRRM1-207ENST00000468822 NME9Q86XW9 330 aa22.17■■□□□ 1.14
SRRM1-207ENST00000468822 USP31Q70CQ4 1352 aa22.16■■□□□ 1.14
SRRM1-207ENST00000468822 SBNO2Q9Y2G9 1366 aa22.15■■□□□ 1.14
SRRM1-207ENST00000468822 ZNF827Q17R98 1081 aa22.15■■□□□ 1.14
SRRM1-207ENST00000468822 NLRP2Q9NX02 1062 aa22.15■■□□□ 1.14
SRRM1-207ENST00000468822 LRRC4BQ9NT99 713 aa22.14■■□□□ 1.13
SRRM1-207ENST00000468822 USP54Q70EL1 1684 aa22.14■■□□□ 1.13
SRRM1-207ENST00000468822 BTAF1O14981 1849 aa22.13■■□□□ 1.13
SRRM1-207ENST00000468822 IL2RBP14784 551 aa22.12■■□□□ 1.13
SRRM1-207ENST00000468822 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
SRRM1-207ENST00000468822 ANKRD24Q8TF21 1146 aa22.11■■□□□ 1.13
SRRM1-207ENST00000468822 ARXQ96QS3 562 aa22.11■■□□□ 1.13
SRRM1-207ENST00000468822 LTN1O94822 1766 aa22.11■■□□□ 1.13
SRRM1-207ENST00000468822 SLC12A5Q9H2X9 1139 aa22.08■■□□□ 1.13
SRRM1-207ENST00000468822 MAP3K5Q99683 1374 aa22.07■■□□□ 1.12
SRRM1-207ENST00000468822 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
SRRM1-207ENST00000468822 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
SRRM1-207ENST00000468822 CHD4Q14839 1912 aa22.04■■□□□ 1.12
SRRM1-207ENST00000468822 KAT6BQ8WYB5 2073 aa22.04■■□□□ 1.12
SRRM1-207ENST00000468822 KCNQ4P56696 695 aa22.03■■□□□ 1.12
SRRM1-207ENST00000468822 EDC4Q6P2E9 1401 aaKnown RBP22.03■■□□□ 1.12
SRRM1-207ENST00000468822 CEP350Q5VT06 3117 aa22.03■■□□□ 1.12
SRRM1-207ENST00000468822 A0A1W2PP64 1363 aa22.02■■□□□ 1.12
SRRM1-207ENST00000468822 DDX54Q8TDD1 881 aaKnown RBP22.02■■□□□ 1.12
SRRM1-207ENST00000468822 PNPLA7Q6ZV29 1317 aa22.01■■□□□ 1.11
SRRM1-207ENST00000468822 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
SRRM1-207ENST00000468822 IP6K1Q92551 441 aa22■■□□□ 1.11
SRRM1-207ENST00000468822 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
SRRM1-207ENST00000468822 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SRRM1-207ENST00000468822 TUBGCP6Q96RT7 1819 aa21.99■■□□□ 1.11
SRRM1-207ENST00000468822 NSD2O96028 1365 aa21.99■■□□□ 1.11
SRRM1-207ENST00000468822 COL24A1Q17RW2 1714 aa21.98■■□□□ 1.11
SRRM1-207ENST00000468822 FBLN1P23142 703 aa21.98■■□□□ 1.11
SRRM1-207ENST00000468822 C1QTNF8P60827 252 aa21.98■■□□□ 1.11
SRRM1-207ENST00000468822 QSER1Q2KHR3 1735 aa21.97■■□□□ 1.11
SRRM1-207ENST00000468822 MSH5O43196 834 aa21.97■■□□□ 1.11
SRRM1-207ENST00000468822 PRIM1P49642 420 aaKnown RBP21.97■■□□□ 1.11
SRRM1-207ENST00000468822 GPR162Q16538 588 aa21.97■■□□□ 1.11
SRRM1-207ENST00000468822 SLC27A3Q5K4L6 730 aa21.97■■□□□ 1.11
SRRM1-207ENST00000468822 SENP3-EIF4A1A0A087X0R7 540 aa21.96■■□□□ 1.11
SRRM1-207ENST00000468822 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
SRRM1-207ENST00000468822 NLGN2Q8NFZ4 835 aa21.96■■□□□ 1.11
SRRM1-207ENST00000468822 SLC16A10Q8TF71 515 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms