RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 BCL11AQ9H165 835 aa7.43□□□□□ -1.22
SND1-207ENST00000468621 SLC12A5Q9H2X9 1139 aa7.43□□□□□ -1.22
SND1-207ENST00000468621 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
SND1-207ENST00000468621 PARP4Q9UKK3 1724 aaKnown RBP7.43□□□□□ -1.22
SND1-207ENST00000468621 A0A1W2PP64 1363 aa7.43□□□□□ -1.22
SND1-207ENST00000468621 CPDO75976 1380 aa7.43□□□□□ -1.22
SND1-207ENST00000468621 SMG6Q86US8 1419 aaKnown RBP7.43□□□□□ -1.22
SND1-207ENST00000468621 NLRP13Q86W25 1043 aa7.42□□□□□ -1.22
SND1-207ENST00000468621 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
SND1-207ENST00000468621 BTG4Q9NY30 223 aa7.42□□□□□ -1.22
SND1-207ENST00000468621 NINLQ9Y2I6 1382 aa7.42□□□□□ -1.22
SND1-207ENST00000468621 EDC4Q6P2E9 1401 aaKnown RBP7.42□□□□□ -1.22
SND1-207ENST00000468621 GCP02774 474 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 NLRP6P59044 892 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
SND1-207ENST00000468621 CHRNA2Q15822 529 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 VPS72Q15906 364 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 B4GALNT3Q6L9W6 998 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 PRDM11Q9NQV5 511 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 NUDCQ9Y266 331 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 TTC21AQ8NDW8 1320 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 ABCC6O95255 1503 aa7.41□□□□□ -1.22
SND1-207ENST00000468621 FAM208AQ9UK61 1670 aaKnown RBP7.41□□□□□ -1.22
SND1-207ENST00000468621 SLC24A1O60721 1099 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 TMF1P82094 1093 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 POLR3GLQ9BT43 218 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 ANKRD36BQ8N2N9 1353 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 OVOS2A0A0J9YW53 1432 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 OVOS2Q6IE36 1432 aa7.4□□□□□ -1.22
SND1-207ENST00000468621 COL5A2P05997 1499 aaPredicted RBP7.4□□□□□ -1.22
SND1-207ENST00000468621 TNS1Q9HBL0 1735 aaKnown RBP7.4□□□□□ -1.23
SND1-207ENST00000468621 RGPD1P0DJD0 1748 aa7.39□□□□□ -1.23
SND1-207ENST00000468621 LRRC37A3O60309 1634 aa7.39□□□□□ -1.23
SND1-207ENST00000468621 SPATA31A5Q5VU36 1347 aa7.39□□□□□ -1.23
SND1-207ENST00000468621 SPATA31A7Q8IWB4 1347 aa7.39□□□□□ -1.23
SND1-207ENST00000468621 ONECUT3O60422 494 aaPredicted RBP7.39□□□□□ -1.23
SND1-207ENST00000468621 HDGFL2Q7Z4V5 671 aaPredicted RBP7.39□□□□□ -1.23
SND1-207ENST00000468621 NME9Q86XW9 330 aa7.39□□□□□ -1.23
SND1-207ENST00000468621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.39□□□□□ -1.23
SND1-207ENST00000468621 PEAK1Q9H792 1746 aa7.38□□□□□ -1.23
SND1-207ENST00000468621 AATKQ6ZMQ8 1374 aa7.38□□□□□ -1.23
SND1-207ENST00000468621 TERF2IPQ9NYB0 399 aa7.38□□□□□ -1.23
SND1-207ENST00000468621 SPATA31A1Q5TZJ5 1347 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 RNF123Q5XPI4 1314 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 ARHGEF25Q86VW2 580 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 CCDC125Q86Z20 511 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 SEPT12Q8IYM1 358 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 AXIN2Q9Y2T1 843 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 CCDC9Q9Y3X0 531 aaKnown RBP7.37□□□□□ -1.23
SND1-207ENST00000468621 SHANK3Q9BYB0 1731 aa7.37□□□□□ -1.23
SND1-207ENST00000468621 VIRMAQ69YN4 1812 aaKnown RBP7.36□□□□□ -1.23
SND1-207ENST00000468621 SOX12O15370 315 aa7.36□□□□□ -1.23
SND1-207ENST00000468621 FAM98CQ17RN3 349 aaKnown RBP7.36□□□□□ -1.23
SND1-207ENST00000468621 CDCA8Q53HL2 280 aa7.36□□□□□ -1.23
SND1-207ENST00000468621 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
SND1-207ENST00000468621 KCNH5Q8NCM2 988 aa7.36□□□□□ -1.23
SND1-207ENST00000468621 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
SND1-207ENST00000468621 CRB1P82279 1406 aa7.35□□□□□ -1.23
SND1-207ENST00000468621 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
SND1-207ENST00000468621 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
SND1-207ENST00000468621 RALBP1Q15311 655 aa7.35□□□□□ -1.23
SND1-207ENST00000468621 PNISRQ8TF01 805 aaKnown RBP7.35□□□□□ -1.23
SND1-207ENST00000468621 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
SND1-207ENST00000468621 NOP58Q9Y2X3 529 aaKnown RBP7.35□□□□□ -1.23
SND1-207ENST00000468621 NSD3Q9BZ95 1437 aa7.35□□□□□ -1.23
SND1-207ENST00000468621 LRP5O75197 1615 aa7.34□□□□□ -1.23
SND1-207ENST00000468621 WDR17Q8IZU2 1322 aa7.34□□□□□ -1.23
SND1-207ENST00000468621 FYB1O15117 783 aa7.34□□□□□ -1.23
SND1-207ENST00000468621 ANP32AP39687 249 aaKnown RBP7.34□□□□□ -1.23
SND1-207ENST00000468621 EVA1CP58658 441 aa7.34□□□□□ -1.23
SND1-207ENST00000468621 CNGB1Q14028 1251 aaPredicted RBP7.34□□□□□ -1.23
SND1-207ENST00000468621 USP35Q9P2H5 1018 aa7.34□□□□□ -1.23
SND1-207ENST00000468621 RGPD3A6NKT7 1758 aaPredicted RBP7.33□□□□□ -1.24
SND1-207ENST00000468621 RGPD4Q7Z3J3 1758 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 MYBBP1AQ9BQG0 1328 aaKnown RBP7.33□□□□□ -1.24
SND1-207ENST00000468621 RREB1Q92766 1687 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 FBLN1P23142 703 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 BARGINQ6ZT62 677 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 KRT27Q7Z3Y8 459 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 DEFB132Q7Z7B7 95 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 TCP11L2Q8N4U5 519 aa7.33□□□□□ -1.24
SND1-207ENST00000468621 BLMP54132 1417 aaPredicted RBP7.33□□□□□ -1.24
SND1-207ENST00000468621 ERBB3P21860 1342 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 ITGB4P16144 1822 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 A0A0G2JS52 829 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 PSDA5PKW4 1024 aaPredicted RBP7.32□□□□□ -1.24
SND1-207ENST00000468621 COG3Q96JB2 828 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 THRAP3Q9Y2W1 955 aaKnown RBP7.32□□□□□ -1.24
SND1-207ENST00000468621 DISP2A7MBM2 1401 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 NUP188Q5SRE5 1749 aa7.32□□□□□ -1.24
SND1-207ENST00000468621 BTAF1O14981 1849 aa7.31□□□□□ -1.24
SND1-207ENST00000468621 MAP3K19Q56UN5 1328 aa7.31□□□□□ -1.24
SND1-207ENST00000468621 PDE3BQ13370 1112 aa7.31□□□□□ -1.24
SND1-207ENST00000468621 FAM182BQ5T319 152 aa7.31□□□□□ -1.24
SND1-207ENST00000468621 TOM1L2Q6ZVM7 507 aa7.31□□□□□ -1.24
SND1-207ENST00000468621 PKD1L3Q7Z443 1732 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms