RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 USP6P35125 1406 aa18.76■□□□□ 0.59
PRPF38B-204ENST00000467302 PLEKHF1Q96S99 279 aa18.76■□□□□ 0.59
PRPF38B-204ENST00000467302 PNNQ9H307 717 aaKnown RBP18.76■□□□□ 0.59
PRPF38B-204ENST00000467302 FBLN1P23142 703 aa18.75■□□□□ 0.59
PRPF38B-204ENST00000467302 BECN1Q14457 450 aa18.75■□□□□ 0.59
PRPF38B-204ENST00000467302 ANKARQ7Z5J8 1434 aa18.75■□□□□ 0.59
PRPF38B-204ENST00000467302 ACEP12821 1306 aa18.75■□□□□ 0.59
PRPF38B-204ENST00000467302 NALCNQ8IZF0 1738 aa18.75■□□□□ 0.59
PRPF38B-204ENST00000467302 FMN2Q9NZ56 1722 aa18.75■□□□□ 0.59
PRPF38B-204ENST00000467302 TBC1D32Q96NH3 1257 aa18.74■□□□□ 0.59
PRPF38B-204ENST00000467302 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
PRPF38B-204ENST00000467302 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
PRPF38B-204ENST00000467302 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
PRPF38B-204ENST00000467302 LRRC7Q96NW7 1537 aa18.73■□□□□ 0.59
PRPF38B-204ENST00000467302 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
PRPF38B-204ENST00000467302 BRPF3Q9ULD4 1205 aa18.73■□□□□ 0.59
PRPF38B-204ENST00000467302 OVOS2A0A0J9YW53 1432 aa18.72■□□□□ 0.59
PRPF38B-204ENST00000467302 OVOS2Q6IE36 1432 aa18.72■□□□□ 0.59
PRPF38B-204ENST00000467302 RGPD8O14715 1765 aaPredicted RBP18.72■□□□□ 0.59
PRPF38B-204ENST00000467302 KCNA6P17658 529 aa18.72■□□□□ 0.59
PRPF38B-204ENST00000467302 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
PRPF38B-204ENST00000467302 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
PRPF38B-204ENST00000467302 TRIM35Q9UPQ4 493 aa18.71■□□□□ 0.59
PRPF38B-204ENST00000467302 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
PRPF38B-204ENST00000467302 FCHSD2O94868 740 aa18.71■□□□□ 0.59
PRPF38B-204ENST00000467302 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
PRPF38B-204ENST00000467302 ANTXR1Q9H6X2 564 aa18.71■□□□□ 0.59
PRPF38B-204ENST00000467302 EMILIN1Q9Y6C2 1016 aa18.7■□□□□ 0.58
PRPF38B-204ENST00000467302 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
PRPF38B-204ENST00000467302 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
PRPF38B-204ENST00000467302 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
PRPF38B-204ENST00000467302 IL16Q14005 1332 aa18.69■□□□□ 0.58
PRPF38B-204ENST00000467302 TRIM27P14373 513 aa18.68■□□□□ 0.58
PRPF38B-204ENST00000467302 EXOSC9Q06265 439 aaKnown RBP18.68■□□□□ 0.58
PRPF38B-204ENST00000467302 RTN4Q9NQC3 1192 aaKnown RBP18.68■□□□□ 0.58
PRPF38B-204ENST00000467302 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
PRPF38B-204ENST00000467302 HDAC1Q13547 482 aaPredicted RBP18.67■□□□□ 0.58
PRPF38B-204ENST00000467302 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
PRPF38B-204ENST00000467302 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
PRPF38B-204ENST00000467302 RIPK4P57078 832 aa18.66■□□□□ 0.58
PRPF38B-204ENST00000467302 IL13P35225 146 aa18.66■□□□□ 0.58
PRPF38B-204ENST00000467302 RRS1Q15050 365 aaKnown RBP18.66■□□□□ 0.58
PRPF38B-204ENST00000467302 TBC1D2Q9BYX2 928 aa18.66■□□□□ 0.58
PRPF38B-204ENST00000467302 RSPH6AQ9H0K4 717 aa18.66■□□□□ 0.58
PRPF38B-204ENST00000467302 USP31Q70CQ4 1352 aa18.65■□□□□ 0.58
PRPF38B-204ENST00000467302 ATF7IPQ6VMQ6 1270 aa18.65■□□□□ 0.58
PRPF38B-204ENST00000467302 PRKAR2BP31323 418 aa18.64■□□□□ 0.58
PRPF38B-204ENST00000467302 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.58
PRPF38B-204ENST00000467302 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.58
PRPF38B-204ENST00000467302 NWD1Q149M9 1564 aa18.64■□□□□ 0.57
PRPF38B-204ENST00000467302 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
PRPF38B-204ENST00000467302 PIK3C2AO00443 1686 aa18.63■□□□□ 0.57
PRPF38B-204ENST00000467302 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
PRPF38B-204ENST00000467302 ADGRL3Q9HAR2 1447 aa18.62■□□□□ 0.57
PRPF38B-204ENST00000467302 HMOX1P09601 288 aa18.62■□□□□ 0.57
PRPF38B-204ENST00000467302 SMC5Q8IY18 1101 aa18.61■□□□□ 0.57
PRPF38B-204ENST00000467302 NOB1Q9ULX3 412 aaKnown RBP18.61■□□□□ 0.57
PRPF38B-204ENST00000467302 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
PRPF38B-204ENST00000467302 ITPRIPQ8IWB1 547 aa18.61■□□□□ 0.57
PRPF38B-204ENST00000467302 ZBTB40Q9NUA8 1239 aa18.6■□□□□ 0.57
PRPF38B-204ENST00000467302 TMEM57Q8N5G2 664 aa18.59■□□□□ 0.57
PRPF38B-204ENST00000467302 KIF16BQ96L93 1317 aa18.58■□□□□ 0.57
PRPF38B-204ENST00000467302 NFE2L2Q16236 605 aa18.58■□□□□ 0.56
PRPF38B-204ENST00000467302 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.56
PRPF38B-204ENST00000467302 RGPD1P0DJD0 1748 aa18.58■□□□□ 0.56
PRPF38B-204ENST00000467302 C22orf23Q9BZE7 217 aa18.57■□□□□ 0.56
PRPF38B-204ENST00000467302 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
PRPF38B-204ENST00000467302 ALDH1L2Q3SY69 923 aa18.57■□□□□ 0.56
PRPF38B-204ENST00000467302 IPO8O15397 1037 aaKnown RBP18.56■□□□□ 0.56
PRPF38B-204ENST00000467302 BRPF1P55201 1214 aaPredicted RBP18.55■□□□□ 0.56
PRPF38B-204ENST00000467302 SBNO1A3KN83 1393 aa18.54■□□□□ 0.56
PRPF38B-204ENST00000467302 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
PRPF38B-204ENST00000467302 DLG5Q8TDM6 1919 aa18.54■□□□□ 0.56
PRPF38B-204ENST00000467302 MFAP1P55081 439 aaKnown RBP18.54■□□□□ 0.56
PRPF38B-204ENST00000467302 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
PRPF38B-204ENST00000467302 FLT4P35916 1363 aa18.53■□□□□ 0.56
PRPF38B-204ENST00000467302 NUCB1Q02818 461 aa18.53■□□□□ 0.56
PRPF38B-204ENST00000467302 ZNF428Q96B54 188 aa18.53■□□□□ 0.56
PRPF38B-204ENST00000467302 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
PRPF38B-204ENST00000467302 SOX12O15370 315 aa18.52■□□□□ 0.56
PRPF38B-204ENST00000467302 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
PRPF38B-204ENST00000467302 PHF8Q9UPP1 1060 aa18.52■□□□□ 0.56
PRPF38B-204ENST00000467302 MAP3K19Q56UN5 1328 aa18.52■□□□□ 0.55
PRPF38B-204ENST00000467302 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
PRPF38B-204ENST00000467302 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
PRPF38B-204ENST00000467302 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
PRPF38B-204ENST00000467302 NLRP6P59044 892 aa18.49■□□□□ 0.55
PRPF38B-204ENST00000467302 SULT6B1Q6IMI4 303 aa18.49■□□□□ 0.55
PRPF38B-204ENST00000467302 MCM4P33991 863 aa18.49■□□□□ 0.55
PRPF38B-204ENST00000467302 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
PRPF38B-204ENST00000467302 CHMP5Q9NZZ3 219 aa18.49■□□□□ 0.55
PRPF38B-204ENST00000467302 RBM25P49756 843 aaKnown RBP18.48■□□□□ 0.55
PRPF38B-204ENST00000467302 GNAI1P63096 354 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 C14orf37Q86TY3 774 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 CHD1LQ86WJ1 897 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 FAM43AQ8N2R8 423 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 SPRYD3Q8NCJ5 442 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 ARHGAP45Q92619 1136 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms