RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 OVOS2A0A0G2JMS6 1433 aa17.08■□□□□ 0.32
GTF3A-205ENST00000466776 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.32
GTF3A-205ENST00000466776 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.32
GTF3A-205ENST00000466776 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
GTF3A-205ENST00000466776 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
GTF3A-205ENST00000466776 MON2Q7Z3U7 1717 aa17.07■□□□□ 0.32
GTF3A-205ENST00000466776 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
GTF3A-205ENST00000466776 TTC21AQ8NDW8 1320 aa17.06■□□□□ 0.32
GTF3A-205ENST00000466776 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
GTF3A-205ENST00000466776 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
GTF3A-205ENST00000466776 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
GTF3A-205ENST00000466776 PEAK1Q9H792 1746 aa17.05■□□□□ 0.32
GTF3A-205ENST00000466776 DDB1Q16531 1140 aa17.04■□□□□ 0.32
GTF3A-205ENST00000466776 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
GTF3A-205ENST00000466776 TTC21BQ7Z4L5 1316 aa17.03■□□□□ 0.32
GTF3A-205ENST00000466776 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
GTF3A-205ENST00000466776 ABCC6O95255 1503 aa17.03■□□□□ 0.32
GTF3A-205ENST00000466776 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.32
GTF3A-205ENST00000466776 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.32
GTF3A-205ENST00000466776 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
GTF3A-205ENST00000466776 LTN1O94822 1766 aa17.02■□□□□ 0.31
GTF3A-205ENST00000466776 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
GTF3A-205ENST00000466776 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
GTF3A-205ENST00000466776 SOX12O15370 315 aa16.99■□□□□ 0.31
GTF3A-205ENST00000466776 NFAT5O94916 1531 aa16.99■□□□□ 0.31
GTF3A-205ENST00000466776 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
GTF3A-205ENST00000466776 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
GTF3A-205ENST00000466776 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
GTF3A-205ENST00000466776 PLSCR1O15162 318 aa16.97■□□□□ 0.31
GTF3A-205ENST00000466776 CARD10Q9BWT7 1032 aa16.97■□□□□ 0.31
GTF3A-205ENST00000466776 AXIN2Q9Y2T1 843 aa16.97■□□□□ 0.31
GTF3A-205ENST00000466776 BCL9O00512 1426 aa16.96■□□□□ 0.31
GTF3A-205ENST00000466776 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
GTF3A-205ENST00000466776 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
GTF3A-205ENST00000466776 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
GTF3A-205ENST00000466776 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
GTF3A-205ENST00000466776 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
GTF3A-205ENST00000466776 EXOC5O00471 708 aa16.94■□□□□ 0.3
GTF3A-205ENST00000466776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
GTF3A-205ENST00000466776 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
GTF3A-205ENST00000466776 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
GTF3A-205ENST00000466776 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
GTF3A-205ENST00000466776 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
GTF3A-205ENST00000466776 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
GTF3A-205ENST00000466776 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
GTF3A-205ENST00000466776 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
GTF3A-205ENST00000466776 EDC4Q6P2E9 1401 aaKnown RBP16.92■□□□□ 0.3
GTF3A-205ENST00000466776 KCNQ2O43526 872 aa16.91■□□□□ 0.3
GTF3A-205ENST00000466776 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
GTF3A-205ENST00000466776 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
GTF3A-205ENST00000466776 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
GTF3A-205ENST00000466776 ERBB3P21860 1342 aa16.9■□□□□ 0.3
GTF3A-205ENST00000466776 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
GTF3A-205ENST00000466776 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
GTF3A-205ENST00000466776 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
GTF3A-205ENST00000466776 NME9Q86XW9 330 aa16.88■□□□□ 0.29
GTF3A-205ENST00000466776 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
GTF3A-205ENST00000466776 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
GTF3A-205ENST00000466776 BTAF1O14981 1849 aa16.86■□□□□ 0.29
GTF3A-205ENST00000466776 IL2RBP14784 551 aa16.86■□□□□ 0.29
GTF3A-205ENST00000466776 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
GTF3A-205ENST00000466776 STK32BQ9NY57 414 aa16.86■□□□□ 0.29
GTF3A-205ENST00000466776 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
GTF3A-205ENST00000466776 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
GTF3A-205ENST00000466776 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
GTF3A-205ENST00000466776 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
GTF3A-205ENST00000466776 PROM2Q8N271 834 aa16.81■□□□□ 0.28
GTF3A-205ENST00000466776 COG3Q96JB2 828 aa16.81■□□□□ 0.28
GTF3A-205ENST00000466776 MYOM1P52179 1685 aa16.81■□□□□ 0.28
GTF3A-205ENST00000466776 YY1P25490 414 aa16.8■□□□□ 0.28
GTF3A-205ENST00000466776 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
GTF3A-205ENST00000466776 IP6K1Q92551 441 aa16.8■□□□□ 0.28
GTF3A-205ENST00000466776 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
GTF3A-205ENST00000466776 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
GTF3A-205ENST00000466776 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
GTF3A-205ENST00000466776 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
GTF3A-205ENST00000466776 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
GTF3A-205ENST00000466776 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
GTF3A-205ENST00000466776 KIF20BQ96Q89 1820 aa16.77■□□□□ 0.28
GTF3A-205ENST00000466776 TESK2Q96S53 571 aa16.77■□□□□ 0.28
GTF3A-205ENST00000466776 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.27
GTF3A-205ENST00000466776 CHD4Q14839 1912 aa16.76■□□□□ 0.27
GTF3A-205ENST00000466776 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
GTF3A-205ENST00000466776 AMPHP49418 695 aa16.76■□□□□ 0.27
GTF3A-205ENST00000466776 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
GTF3A-205ENST00000466776 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
GTF3A-205ENST00000466776 TMF1P82094 1093 aa16.75■□□□□ 0.27
GTF3A-205ENST00000466776 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
GTF3A-205ENST00000466776 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
GTF3A-205ENST00000466776 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
GTF3A-205ENST00000466776 SHANK3Q9BYB0 1731 aa16.73■□□□□ 0.27
GTF3A-205ENST00000466776 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
GTF3A-205ENST00000466776 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
GTF3A-205ENST00000466776 HOXC9P31274 260 aa16.73■□□□□ 0.27
GTF3A-205ENST00000466776 PTGER2P43116 358 aa16.73■□□□□ 0.27
GTF3A-205ENST00000466776 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
GTF3A-205ENST00000466776 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
GTF3A-205ENST00000466776 LY75O60449 1722 aa16.73■□□□□ 0.27
GTF3A-205ENST00000466776 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
GTF3A-205ENST00000466776 USP47Q96K76 1375 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms