RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 HMOX1P09601 288 aa27.62■■■□□ 2.01
PPP1R3F-203ENST00000466508 FLT4P35916 1363 aa27.62■■■□□ 2.01
PPP1R3F-203ENST00000466508 NEFMP07197 916 aa27.61■■■□□ 2.01
PPP1R3F-203ENST00000466508 EIF4A2Q14240 407 aaKnown RBP27.61■■■□□ 2.01
PPP1R3F-203ENST00000466508 XIRP1Q702N8 1843 aaKnown RBP27.6■■■□□ 2.01
PPP1R3F-203ENST00000466508 KIF24Q5T7B8 1368 aa27.59■■■□□ 2.01
PPP1R3F-203ENST00000466508 MST1RQ04912 1400 aa27.59■■■□□ 2.01
PPP1R3F-203ENST00000466508 ATF3P18847 181 aa27.59■■■□□ 2.01
PPP1R3F-203ENST00000466508 HSP90AB2PQ58FF8 381 aa27.59■■■□□ 2.01
PPP1R3F-203ENST00000466508 NUTM2GQ5VZR2 741 aa27.59■■■□□ 2.01
PPP1R3F-203ENST00000466508 TRIM35Q9UPQ4 493 aa27.59■■■□□ 2.01
PPP1R3F-203ENST00000466508 TRPM3Q9HCF6 1732 aaPredicted RBP27.58■■■□□ 2.01
PPP1R3F-203ENST00000466508 RIPK4P57078 832 aa27.57■■■□□ 2
PPP1R3F-203ENST00000466508 FOXO3O43524 673 aa27.57■■■□□ 2
PPP1R3F-203ENST00000466508 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
PPP1R3F-203ENST00000466508 LTN1O94822 1766 aa27.56■■■□□ 2
PPP1R3F-203ENST00000466508 PIP4K2BP78356 416 aa27.55■■■□□ 2
PPP1R3F-203ENST00000466508 PHACTR3Q96KR7 559 aa27.55■■■□□ 2
PPP1R3F-203ENST00000466508 MYH16Q9H6N6 1097 aa27.55■■■□□ 2
PPP1R3F-203ENST00000466508 DLG5Q8TDM6 1919 aa27.55■■■□□ 2
PPP1R3F-203ENST00000466508 AMPHP49418 695 aa27.54■■■□□ 2
PPP1R3F-203ENST00000466508 NFAT5O94916 1531 aa27.53■■■□□ 2
PPP1R3F-203ENST00000466508 NFE2L2Q16236 605 aa27.53■■■□□ 2
PPP1R3F-203ENST00000466508 IL16Q14005 1332 aa27.53■■■□□ 2
PPP1R3F-203ENST00000466508 CADPS2Q86UW7 1296 aa27.53■■■□□ 2
PPP1R3F-203ENST00000466508 MSH6P52701 1360 aa27.52■■■□□ 2
PPP1R3F-203ENST00000466508 ARHGEF10O15013 1369 aa27.51■■□□□ 1.99
PPP1R3F-203ENST00000466508 RTL1A6NKG5 1358 aa27.5■■□□□ 1.99
PPP1R3F-203ENST00000466508 SULT6B1Q6IMI4 303 aa27.5■■□□□ 1.99
PPP1R3F-203ENST00000466508 PHRF1Q9P1Y6 1649 aaKnown RBP27.49■■□□□ 1.99
PPP1R3F-203ENST00000466508 PLIN1O60240 522 aa27.49■■□□□ 1.99
PPP1R3F-203ENST00000466508 AEBP1Q8IUX7 1158 aa27.49■■□□□ 1.99
PPP1R3F-203ENST00000466508 HOXC9P31274 260 aa27.48■■□□□ 1.99
PPP1R3F-203ENST00000466508 XPCQ01831 940 aaPredicted RBP27.48■■□□□ 1.99
PPP1R3F-203ENST00000466508 SLIT3O75094 1523 aa27.48■■□□□ 1.99
PPP1R3F-203ENST00000466508 ALS2Q96Q42 1657 aa27.47■■□□□ 1.99
PPP1R3F-203ENST00000466508 KRT28Q7Z3Y7 464 aa27.47■■□□□ 1.99
PPP1R3F-203ENST00000466508 KCNH5Q8NCM2 988 aa27.47■■□□□ 1.99
PPP1R3F-203ENST00000466508 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.47■■□□□ 1.99
PPP1R3F-203ENST00000466508 FANCIQ9NVI1 1328 aa27.46■■□□□ 1.99
PPP1R3F-203ENST00000466508 KDRP35968 1356 aa27.45■■□□□ 1.98
PPP1R3F-203ENST00000466508 B4GALNT3Q6L9W6 998 aa27.44■■□□□ 1.98
PPP1R3F-203ENST00000466508 IGSF1Q8N6C5 1336 aa27.44■■□□□ 1.98
PPP1R3F-203ENST00000466508 LMOD3Q0VAK6 560 aa27.43■■□□□ 1.98
PPP1R3F-203ENST00000466508 EXOC6Q8TAG9 804 aa27.42■■□□□ 1.98
PPP1R3F-203ENST00000466508 USP19O94966 1318 aa27.42■■□□□ 1.98
PPP1R3F-203ENST00000466508 CALD1Q05682 793 aaKnown RBP27.41■■□□□ 1.98
PPP1R3F-203ENST00000466508 TSR2Q969E8 191 aaKnown RBP27.41■■□□□ 1.98
PPP1R3F-203ENST00000466508 BCAR3O75815 825 aa27.4■■□□□ 1.98
PPP1R3F-203ENST00000466508 CT47B1P0C2W7 299 aaPredicted RBP27.4■■□□□ 1.98
PPP1R3F-203ENST00000466508 EYA1Q99502 592 aa27.4■■□□□ 1.98
PPP1R3F-203ENST00000466508 NPHP3Q7Z494 1330 aa27.39■■□□□ 1.98
PPP1R3F-203ENST00000466508 IP6K1Q92551 441 aa27.39■■□□□ 1.98
PPP1R3F-203ENST00000466508 GCP02774 474 aa27.38■■□□□ 1.97
PPP1R3F-203ENST00000466508 RARSP54136 660 aaKnown RBP27.38■■□□□ 1.97
PPP1R3F-203ENST00000466508 LMOD2Q6P5Q4 547 aa27.38■■□□□ 1.97
PPP1R3F-203ENST00000466508 CCDC136Q96JN2 1154 aa27.38■■□□□ 1.97
PPP1R3F-203ENST00000466508 C20orf194Q5TEA3 1177 aa27.37■■□□□ 1.97
PPP1R3F-203ENST00000466508 HSPA1LP34931 641 aa27.36■■□□□ 1.97
PPP1R3F-203ENST00000466508 CRBNQ96SW2 442 aa27.36■■□□□ 1.97
PPP1R3F-203ENST00000466508 PXDNQ92626 1479 aa27.34■■□□□ 1.97
PPP1R3F-203ENST00000466508 EXOSC9Q06265 439 aaKnown RBP27.34■■□□□ 1.97
PPP1R3F-203ENST00000466508 ARHGEF25Q86VW2 580 aa27.34■■□□□ 1.97
PPP1R3F-203ENST00000466508 THUMPD2Q9BTF0 503 aaKnown RBP27.34■■□□□ 1.97
PPP1R3F-203ENST00000466508 MED1Q15648 1581 aaPredicted RBP27.33■■□□□ 1.97
PPP1R3F-203ENST00000466508 IFT57Q9NWB7 429 aa27.33■■□□□ 1.97
PPP1R3F-203ENST00000466508 DDX17Q92841 729 aaKnown RBP27.32■■□□□ 1.96
PPP1R3F-203ENST00000466508 SLAIN2Q9P270 581 aa27.32■■□□□ 1.96
PPP1R3F-203ENST00000466508 TNS3Q68CZ2 1445 aa27.31■■□□□ 1.96
PPP1R3F-203ENST00000466508 GNAI1P63096 354 aa27.31■■□□□ 1.96
PPP1R3F-203ENST00000466508 LTV1Q96GA3 475 aaPredicted RBP27.31■■□□□ 1.96
PPP1R3F-203ENST00000466508 FAM83GA6ND36 823 aa27.3■■□□□ 1.96
PPP1R3F-203ENST00000466508 ZNF853P0CG23 659 aa27.3■■□□□ 1.96
PPP1R3F-203ENST00000466508 BRINP3Q76B58 766 aa27.3■■□□□ 1.96
PPP1R3F-203ENST00000466508 RGPD2P0DJD1 1756 aa27.28■■□□□ 1.96
PPP1R3F-203ENST00000466508 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
PPP1R3F-203ENST00000466508 PDE3AQ14432 1141 aa27.27■■□□□ 1.96
PPP1R3F-203ENST00000466508 CFAP44Q96MT7 982 aa27.27■■□□□ 1.96
PPP1R3F-203ENST00000466508 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
PPP1R3F-203ENST00000466508 ZBTB7CA1YPR0 619 aa27.27■■□□□ 1.96
PPP1R3F-203ENST00000466508 CANXP27824 592 aaKnown RBP27.27■■□□□ 1.96
PPP1R3F-203ENST00000466508 DCTN1Q14203 1278 aa27.26■■□□□ 1.95
PPP1R3F-203ENST00000466508 MTHFSDQ2M296 383 aaKnown RBP27.26■■□□□ 1.95
PPP1R3F-203ENST00000466508 GAS2L2Q8NHY3 880 aa27.26■■□□□ 1.95
PPP1R3F-203ENST00000466508 ROBO1Q9Y6N7 1651 aa27.25■■□□□ 1.95
PPP1R3F-203ENST00000466508 PLEKHG5O94827 1062 aa27.25■■□□□ 1.95
PPP1R3F-203ENST00000466508 BCL2L13Q9BXK5 485 aa27.25■■□□□ 1.95
PPP1R3F-203ENST00000466508 SPATA31A3Q5VYP0 1347 aa27.25■■□□□ 1.95
PPP1R3F-203ENST00000466508 RGPD5Q99666 1765 aa27.24■■□□□ 1.95
PPP1R3F-203ENST00000466508 MBIPQ9NS73 344 aa27.24■■□□□ 1.95
PPP1R3F-203ENST00000466508 FRAT1Q92837 279 aaPredicted RBP27.23■■□□□ 1.95
PPP1R3F-203ENST00000466508 CAMTA1Q9Y6Y1 1673 aa27.22■■□□□ 1.95
PPP1R3F-203ENST00000466508 ZNF428Q96B54 188 aa27.22■■□□□ 1.95
PPP1R3F-203ENST00000466508 NBPF6Q5VWK0 638 aa27.21■■□□□ 1.95
PPP1R3F-203ENST00000466508 NBPF4Q96M43 638 aa27.21■■□□□ 1.95
PPP1R3F-203ENST00000466508 NCAPD2Q15021 1401 aa27.21■■□□□ 1.95
PPP1R3F-203ENST00000466508 MCM10Q7L590 875 aa27.21■■□□□ 1.95
PPP1R3F-203ENST00000466508 SMC4Q9NTJ3 1288 aa27.21■■□□□ 1.95
PPP1R3F-203ENST00000466508 USHBP1Q8N6Y0 703 aa27.2■■□□□ 1.94
PPP1R3F-203ENST00000466508 LRRC37A3O60309 1634 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms