RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 NINLQ9Y2I6 1382 aa8.72□□□□□ -1.01
PSMB4-202ENST00000466425 TRAK1Q9UPV9 953 aa8.71□□□□□ -1.02
PSMB4-202ENST00000466425 BLMP54132 1417 aaPredicted RBP8.71□□□□□ -1.02
PSMB4-202ENST00000466425 PTPRMP28827 1452 aa8.7□□□□□ -1.02
PSMB4-202ENST00000466425 ERVK-7P63135 1459 aa8.7□□□□□ -1.02
PSMB4-202ENST00000466425 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
PSMB4-202ENST00000466425 MYO3AQ8NEV4 1616 aa8.69□□□□□ -1.02
PSMB4-202ENST00000466425 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
PSMB4-202ENST00000466425 ADGRB1O14514 1584 aa8.69□□□□□ -1.02
PSMB4-202ENST00000466425 PIK3C2BO00750 1634 aa8.69□□□□□ -1.02
PSMB4-202ENST00000466425 ZNF142P52746 1687 aaPredicted RBP8.69□□□□□ -1.02
PSMB4-202ENST00000466425 PTPN5P54829 565 aa8.68□□□□□ -1.02
PSMB4-202ENST00000466425 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
PSMB4-202ENST00000466425 NSD2O96028 1365 aa8.68□□□□□ -1.02
PSMB4-202ENST00000466425 KDM5AP29375 1690 aaKnown RBP8.68□□□□□ -1.02
PSMB4-202ENST00000466425 IFT172Q9UG01 1749 aa8.68□□□□□ -1.02
PSMB4-202ENST00000466425 NEXMIFQ5QGS0 1516 aa8.67□□□□□ -1.02
PSMB4-202ENST00000466425 TMEM132EQ6IEE7 984 aa8.67□□□□□ -1.02
PSMB4-202ENST00000466425 ATAD2Q6PL18 1390 aa8.67□□□□□ -1.02
PSMB4-202ENST00000466425 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
PSMB4-202ENST00000466425 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
PSMB4-202ENST00000466425 KIF3CO14782 793 aa8.66□□□□□ -1.02
PSMB4-202ENST00000466425 IRX6P78412 446 aaPredicted RBP8.66□□□□□ -1.02
PSMB4-202ENST00000466425 TRAF7Q6Q0C0 670 aa8.66□□□□□ -1.02
PSMB4-202ENST00000466425 CFAP53Q96M91 514 aa8.66□□□□□ -1.02
PSMB4-202ENST00000466425 POGKQ9P215 609 aa8.66□□□□□ -1.02
PSMB4-202ENST00000466425 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
PSMB4-202ENST00000466425 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
PSMB4-202ENST00000466425 ANKRD36BQ8N2N9 1353 aa8.65□□□□□ -1.02
PSMB4-202ENST00000466425 RRP1P56182 461 aaKnown RBP8.65□□□□□ -1.02
PSMB4-202ENST00000466425 CARD14Q9BXL6 1004 aa8.65□□□□□ -1.02
PSMB4-202ENST00000466425 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
PSMB4-202ENST00000466425 PPLO60437 1756 aa8.65□□□□□ -1.02
PSMB4-202ENST00000466425 NSD3Q9BZ95 1437 aa8.64□□□□□ -1.03
PSMB4-202ENST00000466425 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
PSMB4-202ENST00000466425 LCE2BO14633 110 aa8.64□□□□□ -1.03
PSMB4-202ENST00000466425 HRO43593 1189 aa8.64□□□□□ -1.03
PSMB4-202ENST00000466425 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
PSMB4-202ENST00000466425 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
PSMB4-202ENST00000466425 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
PSMB4-202ENST00000466425 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.64□□□□□ -1.03
PSMB4-202ENST00000466425 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
PSMB4-202ENST00000466425 PDE4AP27815 886 aa8.63□□□□□ -1.03
PSMB4-202ENST00000466425 SRPK2P78362 688 aaKnown RBP8.63□□□□□ -1.03
PSMB4-202ENST00000466425 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
PSMB4-202ENST00000466425 HDGFL2Q7Z4V5 671 aaPredicted RBP8.63□□□□□ -1.03
PSMB4-202ENST00000466425 CCDC136Q96JN2 1154 aa8.63□□□□□ -1.03
PSMB4-202ENST00000466425 SLC12A5Q9H2X9 1139 aa8.63□□□□□ -1.03
PSMB4-202ENST00000466425 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
PSMB4-202ENST00000466425 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
PSMB4-202ENST00000466425 SPATA31D1Q6ZQQ2 1576 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 NUDT7P0C024 238 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 DSG2Q14126 1118 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 MLECQ14165 292 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 LARP6Q9BRS8 491 aaKnown RBP8.62□□□□□ -1.03
PSMB4-202ENST00000466425 STK26Q9P289 416 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
PSMB4-202ENST00000466425 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
PSMB4-202ENST00000466425 ZMYM3Q14202 1370 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 E9PSI1 815 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 TK2O00142 265 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 SIRT1Q96EB6 747 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 PRAM1Q96QH2 718 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 MYO5BQ9ULV0 1848 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 STRCQ7RTU9 1775 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
PSMB4-202ENST00000466425 ZNF521Q96K83 1311 aa8.6□□□□□ -1.03
PSMB4-202ENST00000466425 MYOM1P52179 1685 aa8.6□□□□□ -1.03
PSMB4-202ENST00000466425 LMTK3Q96Q04 1460 aa8.6□□□□□ -1.03
PSMB4-202ENST00000466425 FOXK1P85037 733 aa8.6□□□□□ -1.03
PSMB4-202ENST00000466425 RUNDC1Q96C34 613 aa8.6□□□□□ -1.03
PSMB4-202ENST00000466425 PNNQ9H307 717 aaKnown RBP8.6□□□□□ -1.03
PSMB4-202ENST00000466425 TNRQ92752 1358 aa8.6□□□□□ -1.03
PSMB4-202ENST00000466425 DLC1Q96QB1 1528 aa8.59□□□□□ -1.03
PSMB4-202ENST00000466425 B4GALNT3Q6L9W6 998 aa8.59□□□□□ -1.03
PSMB4-202ENST00000466425 CEP170BQ9Y4F5 1589 aaPredicted RBP8.59□□□□□ -1.03
PSMB4-202ENST00000466425 QRICH2Q9H0J4 1663 aa8.59□□□□□ -1.03
PSMB4-202ENST00000466425 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
PSMB4-202ENST00000466425 APAF1O14727 1248 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
PSMB4-202ENST00000466425 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
PSMB4-202ENST00000466425 TULP4Q9NRJ4 1543 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 ALKQ9UM73 1620 aa8.58□□□□□ -1.04
PSMB4-202ENST00000466425 MED14O60244 1454 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 UBR1Q8IWV7 1749 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 MTHFSP49914 203 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 MYT1Q01538 1121 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 CADPS2Q86UW7 1296 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 TRMT2AQ8IZ69 625 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms