RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
CNOT4-208ENST00000465721 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
CNOT4-208ENST00000465721 USP54Q70EL1 1684 aa17.11■□□□□ 0.33
CNOT4-208ENST00000465721 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
CNOT4-208ENST00000465721 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
CNOT4-208ENST00000465721 BCL9O00512 1426 aa17.11■□□□□ 0.33
CNOT4-208ENST00000465721 NFAT5O94916 1531 aa17.11■□□□□ 0.33
CNOT4-208ENST00000465721 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
CNOT4-208ENST00000465721 KCNQ2O43526 872 aa17.09■□□□□ 0.33
CNOT4-208ENST00000465721 YY1P25490 414 aa17.09■□□□□ 0.33
CNOT4-208ENST00000465721 CHD4Q14839 1912 aa17.08■□□□□ 0.33
CNOT4-208ENST00000465721 LTN1O94822 1766 aa17.08■□□□□ 0.33
CNOT4-208ENST00000465721 ABCC6O95255 1503 aa17.08■□□□□ 0.32
CNOT4-208ENST00000465721 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
CNOT4-208ENST00000465721 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
CNOT4-208ENST00000465721 PLSCR1O15162 318 aa17.08■□□□□ 0.32
CNOT4-208ENST00000465721 NLRP6P59044 892 aa17.08■□□□□ 0.32
CNOT4-208ENST00000465721 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
CNOT4-208ENST00000465721 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.32
CNOT4-208ENST00000465721 DDB1Q16531 1140 aa17.07■□□□□ 0.32
CNOT4-208ENST00000465721 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
CNOT4-208ENST00000465721 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
CNOT4-208ENST00000465721 PAPPAQ13219 1627 aa17.06■□□□□ 0.32
CNOT4-208ENST00000465721 KAT6BQ8WYB5 2073 aa17.06■□□□□ 0.32
CNOT4-208ENST00000465721 BTAF1O14981 1849 aa17.05■□□□□ 0.32
CNOT4-208ENST00000465721 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
CNOT4-208ENST00000465721 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
CNOT4-208ENST00000465721 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
CNOT4-208ENST00000465721 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
CNOT4-208ENST00000465721 ARHGEF25Q86VW2 580 aa17.03■□□□□ 0.32
CNOT4-208ENST00000465721 PROM2Q8N271 834 aa17.03■□□□□ 0.32
CNOT4-208ENST00000465721 PDGFDQ9GZP0 370 aaPredicted RBP17.03■□□□□ 0.32
CNOT4-208ENST00000465721 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
CNOT4-208ENST00000465721 TTC21BQ7Z4L5 1316 aa17.01■□□□□ 0.31
CNOT4-208ENST00000465721 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
CNOT4-208ENST00000465721 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
CNOT4-208ENST00000465721 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
CNOT4-208ENST00000465721 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
CNOT4-208ENST00000465721 PTGER2P43116 358 aa16.99■□□□□ 0.31
CNOT4-208ENST00000465721 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
CNOT4-208ENST00000465721 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
CNOT4-208ENST00000465721 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
CNOT4-208ENST00000465721 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
CNOT4-208ENST00000465721 GOLGB1Q14789 3259 aaKnown RBP16.98■□□□□ 0.31
CNOT4-208ENST00000465721 COL24A1Q17RW2 1714 aa16.98■□□□□ 0.31
CNOT4-208ENST00000465721 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
CNOT4-208ENST00000465721 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
CNOT4-208ENST00000465721 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
CNOT4-208ENST00000465721 SOX12O15370 315 aa16.96■□□□□ 0.31
CNOT4-208ENST00000465721 TXNRD1Q16881 649 aa16.96■□□□□ 0.31
CNOT4-208ENST00000465721 CD163L1Q9NR16 1453 aa16.95■□□□□ 0.3
CNOT4-208ENST00000465721 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
CNOT4-208ENST00000465721 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
CNOT4-208ENST00000465721 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
CNOT4-208ENST00000465721 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
CNOT4-208ENST00000465721 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
CNOT4-208ENST00000465721 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
CNOT4-208ENST00000465721 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
CNOT4-208ENST00000465721 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
CNOT4-208ENST00000465721 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
CNOT4-208ENST00000465721 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
CNOT4-208ENST00000465721 ERBB3P21860 1342 aa16.93■□□□□ 0.3
CNOT4-208ENST00000465721 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
CNOT4-208ENST00000465721 EXOC5O00471 708 aa16.92■□□□□ 0.3
CNOT4-208ENST00000465721 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
CNOT4-208ENST00000465721 DOT1LQ8TEK3 1739 aa16.92■□□□□ 0.3
CNOT4-208ENST00000465721 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
CNOT4-208ENST00000465721 RGPD2P0DJD1 1756 aa16.91■□□□□ 0.3
CNOT4-208ENST00000465721 LY75O60449 1722 aa16.9■□□□□ 0.3
CNOT4-208ENST00000465721 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
CNOT4-208ENST00000465721 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
CNOT4-208ENST00000465721 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
CNOT4-208ENST00000465721 KCNA4P22459 653 aa16.88■□□□□ 0.29
CNOT4-208ENST00000465721 ZNF784Q8NCA9 323 aaPredicted RBP16.88■□□□□ 0.29
CNOT4-208ENST00000465721 ACSBG1Q96GR2 724 aa16.88■□□□□ 0.29
CNOT4-208ENST00000465721 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
CNOT4-208ENST00000465721 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
CNOT4-208ENST00000465721 NME9Q86XW9 330 aa16.86■□□□□ 0.29
CNOT4-208ENST00000465721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.86■□□□□ 0.297e-7■■■■□ 23.2
CNOT4-208ENST00000465721 IL2RBP14784 551 aa16.85■□□□□ 0.29
CNOT4-208ENST00000465721 ZNF827Q17R98 1081 aa16.85■□□□□ 0.29
CNOT4-208ENST00000465721 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
CNOT4-208ENST00000465721 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
CNOT4-208ENST00000465721 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
CNOT4-208ENST00000465721 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
CNOT4-208ENST00000465721 ARXQ96QS3 562 aa16.82■□□□□ 0.28
CNOT4-208ENST00000465721 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
CNOT4-208ENST00000465721 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
CNOT4-208ENST00000465721 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
CNOT4-208ENST00000465721 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
CNOT4-208ENST00000465721 C5P01031 1676 aa16.78■□□□□ 0.28
CNOT4-208ENST00000465721 NSD2O96028 1365 aa16.78■□□□□ 0.28
CNOT4-208ENST00000465721 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
CNOT4-208ENST00000465721 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.28
CNOT4-208ENST00000465721 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.28
CNOT4-208ENST00000465721 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
CNOT4-208ENST00000465721 MEGF6O75095 1541 aa16.76■□□□□ 0.27
CNOT4-208ENST00000465721 SLC27A3Q5K4L6 730 aa16.76■□□□□ 0.27
CNOT4-208ENST00000465721 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
CNOT4-208ENST00000465721 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms