RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
GABRE-205ENST00000465405 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
GABRE-205ENST00000465405 USP47Q96K76 1375 aa12.4□□□□□ -0.42
GABRE-205ENST00000465405 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
GABRE-205ENST00000465405 NFAT5O94916 1531 aa12.39□□□□□ -0.43
GABRE-205ENST00000465405 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
GABRE-205ENST00000465405 ARHGEF25Q86VW2 580 aa12.39□□□□□ -0.43
GABRE-205ENST00000465405 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
GABRE-205ENST00000465405 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
GABRE-205ENST00000465405 CLSPNQ9HAW4 1339 aa12.38□□□□□ -0.43
GABRE-205ENST00000465405 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
GABRE-205ENST00000465405 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
GABRE-205ENST00000465405 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
GABRE-205ENST00000465405 USP31Q70CQ4 1352 aa12.38□□□□□ -0.43
GABRE-205ENST00000465405 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
GABRE-205ENST00000465405 CRB1P82279 1406 aa12.37□□□□□ -0.43
GABRE-205ENST00000465405 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
GABRE-205ENST00000465405 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
GABRE-205ENST00000465405 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
GABRE-205ENST00000465405 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
GABRE-205ENST00000465405 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
GABRE-205ENST00000465405 TMF1P82094 1093 aa12.35□□□□□ -0.43
GABRE-205ENST00000465405 TOM1L2Q6ZVM7 507 aa12.35□□□□□ -0.43
GABRE-205ENST00000465405 CCER1Q8TC90 406 aaPredicted RBP12.35□□□□□ -0.43
GABRE-205ENST00000465405 WDR17Q8IZU2 1322 aa12.35□□□□□ -0.43
GABRE-205ENST00000465405 TNS1Q9HBL0 1735 aaKnown RBP12.34□□□□□ -0.43
GABRE-205ENST00000465405 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
GABRE-205ENST00000465405 LTN1O94822 1766 aa12.34□□□□□ -0.43
GABRE-205ENST00000465405 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
GABRE-205ENST00000465405 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
GABRE-205ENST00000465405 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
GABRE-205ENST00000465405 BAG6P46379 1132 aa12.33□□□□□ -0.44
GABRE-205ENST00000465405 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
GABRE-205ENST00000465405 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
GABRE-205ENST00000465405 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
GABRE-205ENST00000465405 TRIM37O94972 964 aa12.32□□□□□ -0.44
GABRE-205ENST00000465405 CSB-PGBD3P0DP91 1061 aa12.32□□□□□ -0.44
GABRE-205ENST00000465405 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
GABRE-205ENST00000465405 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
GABRE-205ENST00000465405 LRRC37A3O60309 1634 aa12.32□□□□□ -0.44
GABRE-205ENST00000465405 ANKRD36BQ8N2N9 1353 aa12.31□□□□□ -0.44
GABRE-205ENST00000465405 ABCC6O95255 1503 aa12.31□□□□□ -0.44
GABRE-205ENST00000465405 MYOM1P52179 1685 aa12.3□□□□□ -0.44
GABRE-205ENST00000465405 FBLN1P23142 703 aa12.3□□□□□ -0.44
GABRE-205ENST00000465405 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
GABRE-205ENST00000465405 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
GABRE-205ENST00000465405 DDB1Q16531 1140 aa12.29□□□□□ -0.44
GABRE-205ENST00000465405 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
GABRE-205ENST00000465405 ERBB3P21860 1342 aa12.29□□□□□ -0.44
GABRE-205ENST00000465405 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
GABRE-205ENST00000465405 FYB1O15117 783 aa12.28□□□□□ -0.44
GABRE-205ENST00000465405 APBA3O96018 575 aa12.28□□□□□ -0.44
GABRE-205ENST00000465405 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
GABRE-205ENST00000465405 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
GABRE-205ENST00000465405 COG3Q96JB2 828 aa12.28□□□□□ -0.44
GABRE-205ENST00000465405 GGNBP2Q9H3C7 697 aa12.28□□□□□ -0.44
GABRE-205ENST00000465405 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
GABRE-205ENST00000465405 CDCA8Q53HL2 280 aa12.27□□□□□ -0.45
GABRE-205ENST00000465405 MARCH10Q8NA82 808 aaPredicted RBP12.27□□□□□ -0.45
GABRE-205ENST00000465405 CAMKK2Q96RR4 588 aa12.27□□□□□ -0.45
GABRE-205ENST00000465405 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.45
GABRE-205ENST00000465405 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
GABRE-205ENST00000465405 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
GABRE-205ENST00000465405 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
GABRE-205ENST00000465405 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
GABRE-205ENST00000465405 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
GABRE-205ENST00000465405 IP6K1Q92551 441 aa12.26□□□□□ -0.45
GABRE-205ENST00000465405 CDCA7Q9BWT1 371 aaPredicted RBP12.26□□□□□ -0.45
GABRE-205ENST00000465405 MAP3K19Q56UN5 1328 aa12.26□□□□□ -0.45
GABRE-205ENST00000465405 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
GABRE-205ENST00000465405 HSPA5P11021 654 aaKnown RBP12.25□□□□□ -0.45
GABRE-205ENST00000465405 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
GABRE-205ENST00000465405 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
GABRE-205ENST00000465405 EXOC5O00471 708 aa12.24□□□□□ -0.45
GABRE-205ENST00000465405 HOXC9P31274 260 aa12.24□□□□□ -0.45
GABRE-205ENST00000465405 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
GABRE-205ENST00000465405 RRS1Q15050 365 aaKnown RBP12.24□□□□□ -0.45
GABRE-205ENST00000465405 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
GABRE-205ENST00000465405 RREB1Q92766 1687 aa12.23□□□□□ -0.45
GABRE-205ENST00000465405 NSD3Q9BZ95 1437 aa12.23□□□□□ -0.45
GABRE-205ENST00000465405 AMPHP49418 695 aa12.23□□□□□ -0.45
GABRE-205ENST00000465405 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
GABRE-205ENST00000465405 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
GABRE-205ENST00000465405 IL2RBP14784 551 aa12.22□□□□□ -0.45
GABRE-205ENST00000465405 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
GABRE-205ENST00000465405 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
GABRE-205ENST00000465405 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
GABRE-205ENST00000465405 C11orf95C9JLR9 678 aaPredicted RBP12.21□□□□□ -0.45
GABRE-205ENST00000465405 BCL9O00512 1426 aa12.2□□□□□ -0.46
GABRE-205ENST00000465405 PARD3Q8TEW0 1356 aa12.2□□□□□ -0.46
GABRE-205ENST00000465405 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
GABRE-205ENST00000465405 KCNQ2O43526 872 aa12.19□□□□□ -0.46
GABRE-205ENST00000465405 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
GABRE-205ENST00000465405 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 PLSCR1O15162 318 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms