RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
NUCKS1-202ENST00000464938 NDUFB9Q9Y6M9 179 aa3.87□□□□□ -1.79
NUCKS1-202ENST00000464938 SOBPA7XYQ1 873 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 GDF11O95390 407 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 TIMP2P16035 220 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 SH3BP2P78314 561 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 NR6A1Q15406 480 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 MRPL14Q6P1L8 145 aaKnown RBP3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 MPNDQ8N594 471 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 EHBP1Q8NDI1 1231 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 PRM3Q9NNZ6 103 aa3.86□□□□□ -1.79
NUCKS1-202ENST00000464938 KCNH2Q12809 1159 aa3.85□□□□□ -1.79
NUCKS1-202ENST00000464938 CCDC24Q8N4L8 307 aa3.85□□□□□ -1.79
NUCKS1-202ENST00000464938 ZC3H4Q9UPT8 1303 aaKnown RBP3.85□□□□□ -1.79
NUCKS1-202ENST00000464938 CCNYL3P0C7X3 344 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ABL2P42684 1182 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 WASHC4Q2M389 1173 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ADAMTS19Q8TE59 1207 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 TSC1Q92574 1164 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 NUDT12Q9BQG2 462 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ALG2Q9H553 416 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 MAP10Q9P2G4 905 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 FKBPLQ9UIM3 349 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ZNF777Q9ULD5 760 aaPredicted RBP3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ADAMTS8Q9UP79 889 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ZNF330Q9Y3S2 320 aaPredicted RBP3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 TLL2Q9Y6L7 1015 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 WASF2Q9Y6W5 498 aa3.84□□□□□ -1.79
NUCKS1-202ENST00000464938 ARID3CA6NKF2 412 aa3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 POM121CA8CG34 1229 aa3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 PPFIA3O75145 1194 aa3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 GPR161Q8N6U8 529 aaKnown RBP3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 GPKOWQ92917 476 aaPredicted RBP eCLIP3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 PURBQ96QR8 312 aaKnown RBP3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 OCSTAMPQ9BR26 566 aa3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 GPSM3Q9Y4H4 160 aa3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 DNMT3AQ9Y6K1 912 aaPredicted RBP3.83□□□□□ -1.8
NUCKS1-202ENST00000464938 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 RNF225M0QZC1 329 aaPredicted RBP3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 NR1H3Q13133 447 aa3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 NNTQ13423 1086 aa3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 PDXDC2PQ6P474 469 aa3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 WWC1Q8IX03 1113 aa3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 ARMC2Q8NEN0 867 aa3.82□□□□□ -1.8
NUCKS1-202ENST00000464938 ZBBXA8MT70 800 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 ADH1CP00326 375 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 IGHA1P01876 353 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 FBXO45P0C2W1 286 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 SOX11P35716 441 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 ZNF385CQ66K41 422 aaPredicted RBP3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 SH3BP5LQ7L8J4 393 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 PNMA1Q8ND90 353 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 SERPINA10Q9UK55 444 aa3.81□□□□□ -1.8
NUCKS1-202ENST00000464938 ARHGEF15O94989 841 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 VARSP26640 1264 aaKnown RBP3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 CTHP32929 405 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 WDR4P57081 412 aaKnown RBP3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 SRPK2P78362 688 aaKnown RBP3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 VAC14Q08AM6 782 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 SCARF1Q14162 830 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 HDGFL1Q5TGJ6 251 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 SH3RF1Q7Z6J0 888 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 CCDC82Q8N4S0 544 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 GLMNQ92990 594 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 ARXQ96QS3 562 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 UNC93B1Q9H1C4 597 aa3.8□□□□□ -1.8
NUCKS1-202ENST00000464938 SOS2Q07890 1332 aaPredicted RBP3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 SLURP2P0DP57 97 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 NBPF14Q5TI25 921 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 ZNF511Q8NB15 262 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 NANOS1Q8WY41 292 aaKnown RBP3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 CDK15Q96Q40 435 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 C1QTNF2Q9BXJ5 285 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 ZFAND3Q9H8U3 227 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 DNMT3LQ9UJW3 386 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 CHIC2Q9UKJ5 165 aa3.79□□□□□ -1.8
NUCKS1-202ENST00000464938 ADAM23O75077 832 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 ITGB2P05107 769 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 NR3C2P08235 984 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 MCCD1P59942 119 aaPredicted RBP3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 EIF4G2P78344 907 aaKnown RBP eCLIP3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 PTK2Q05397 1052 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 C4orf48Q5BLP8 95 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 RNFT1Q5M7Z0 435 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 GPAT2Q6NUI2 795 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 PHTF2Q8N3S3 785 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 WHAMMQ8TF30 809 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 BAP1Q92560 729 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 ITPKCQ96DU7 683 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 CALR3Q96L12 384 aaKnown RBP3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 UCN2Q96RP3 112 aa3.78□□□□□ -1.8
NUCKS1-202ENST00000464938 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 MAN1A2O60476 641 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 FOXK2Q01167 660 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 LINC01559Q495D7 138 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 CFAP70Q5T0N1 1121 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 MEIOBQ8N635 442 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 NFATC2IPQ8NCF5 419 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 CNTNAP3BQ96NU0 1288 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms