RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
SCAF8-205ENST00000464628 COL18A1P39060 1754 aa17.26■□□□□ 0.35
SCAF8-205ENST00000464628 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
SCAF8-205ENST00000464628 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
SCAF8-205ENST00000464628 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
SCAF8-205ENST00000464628 USP19O94966 1318 aa17.24■□□□□ 0.35
SCAF8-205ENST00000464628 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
SCAF8-205ENST00000464628 ADCY9O60503 1353 aa17.24■□□□□ 0.35
SCAF8-205ENST00000464628 DDB1Q16531 1140 aa17.23■□□□□ 0.35
SCAF8-205ENST00000464628 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
SCAF8-205ENST00000464628 POGKQ9P215 609 aa17.23■□□□□ 0.35
SCAF8-205ENST00000464628 BTAF1O14981 1849 aa17.23■□□□□ 0.35
SCAF8-205ENST00000464628 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
SCAF8-205ENST00000464628 MINK1Q8N4C8 1332 aaPredicted RBP17.21■□□□□ 0.35
SCAF8-205ENST00000464628 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
SCAF8-205ENST00000464628 MSH5O43196 834 aa17.21■□□□□ 0.35
SCAF8-205ENST00000464628 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
SCAF8-205ENST00000464628 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
SCAF8-205ENST00000464628 YBX3P16989 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAF8-205ENST00000464628 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
SCAF8-205ENST00000464628 ZNF827Q17R98 1081 aa17.19■□□□□ 0.34
SCAF8-205ENST00000464628 SLIT3O75094 1523 aa17.17■□□□□ 0.34
SCAF8-205ENST00000464628 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
SCAF8-205ENST00000464628 WDR90Q96KV7 1748 aa17.17■□□□□ 0.34
SCAF8-205ENST00000464628 GPBP1L1Q9HC44 474 aaPredicted RBP17.17■□□□□ 0.34
SCAF8-205ENST00000464628 TRPM1Q7Z4N2 1603 aa17.15■□□□□ 0.34
SCAF8-205ENST00000464628 GRIN3BO60391 1043 aa17.14■□□□□ 0.33
SCAF8-205ENST00000464628 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
SCAF8-205ENST00000464628 ABCC6O95255 1503 aa17.13■□□□□ 0.33
SCAF8-205ENST00000464628 GCP02774 474 aa17.13■□□□□ 0.33
SCAF8-205ENST00000464628 DNAJC5GQ8N7S2 189 aa17.13■□□□□ 0.33
SCAF8-205ENST00000464628 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
SCAF8-205ENST00000464628 TNS2Q63HR2 1409 aa17.13■□□□□ 0.33
SCAF8-205ENST00000464628 CAPN15O75808 1086 aa17.12■□□□□ 0.33
SCAF8-205ENST00000464628 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-205ENST00000464628 ACEP12821 1306 aa17.12■□□□□ 0.33
SCAF8-205ENST00000464628 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
SCAF8-205ENST00000464628 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
SCAF8-205ENST00000464628 POLD1P28340 1107 aa17.1■□□□□ 0.33
SCAF8-205ENST00000464628 TOM1L2Q6ZVM7 507 aa17.1■□□□□ 0.33
SCAF8-205ENST00000464628 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
SCAF8-205ENST00000464628 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
SCAF8-205ENST00000464628 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
SCAF8-205ENST00000464628 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
SCAF8-205ENST00000464628 CDCA7Q9BWT1 371 aaPredicted RBP17.09■□□□□ 0.33
SCAF8-205ENST00000464628 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
SCAF8-205ENST00000464628 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
SCAF8-205ENST00000464628 KIF3CO14782 793 aa17.08■□□□□ 0.32
SCAF8-205ENST00000464628 SLC34A2O95436 690 aa17.08■□□□□ 0.32
SCAF8-205ENST00000464628 PRELPP51888 382 aa17.08■□□□□ 0.32
SCAF8-205ENST00000464628 LY75O60449 1722 aa17.07■□□□□ 0.32
SCAF8-205ENST00000464628 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
SCAF8-205ENST00000464628 APLP1P51693 650 aa17.07■□□□□ 0.32
SCAF8-205ENST00000464628 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
SCAF8-205ENST00000464628 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
SCAF8-205ENST00000464628 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
SCAF8-205ENST00000464628 USP6P35125 1406 aa17.04■□□□□ 0.32
SCAF8-205ENST00000464628 CPSF1Q10570 1443 aaKnown RBP17.04■□□□□ 0.32
SCAF8-205ENST00000464628 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
SCAF8-205ENST00000464628 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
SCAF8-205ENST00000464628 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
SCAF8-205ENST00000464628 QRICH2Q9H0J4 1663 aa17.03■□□□□ 0.32
SCAF8-205ENST00000464628 PCNTO95613 3336 aa17.02■□□□□ 0.31
SCAF8-205ENST00000464628 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
SCAF8-205ENST00000464628 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
SCAF8-205ENST00000464628 EXOC5O00471 708 aa17■□□□□ 0.31
SCAF8-205ENST00000464628 TNS4Q8IZW8 715 aa17■□□□□ 0.31
SCAF8-205ENST00000464628 CDK19Q9BWU1 502 aa17■□□□□ 0.31
SCAF8-205ENST00000464628 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
SCAF8-205ENST00000464628 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
SCAF8-205ENST00000464628 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
SCAF8-205ENST00000464628 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
SCAF8-205ENST00000464628 DOT1LQ8TEK3 1739 aa16.98■□□□□ 0.31
SCAF8-205ENST00000464628 NFAT5O94916 1531 aa16.97■□□□□ 0.31
SCAF8-205ENST00000464628 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
SCAF8-205ENST00000464628 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
SCAF8-205ENST00000464628 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
SCAF8-205ENST00000464628 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
SCAF8-205ENST00000464628 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
SCAF8-205ENST00000464628 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
SCAF8-205ENST00000464628 C5P01031 1676 aa16.94■□□□□ 0.3
SCAF8-205ENST00000464628 TOMM70O94826 608 aa16.93■□□□□ 0.3
SCAF8-205ENST00000464628 NLRP6P59044 892 aa16.93■□□□□ 0.3
SCAF8-205ENST00000464628 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
SCAF8-205ENST00000464628 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
SCAF8-205ENST00000464628 KIAA1551Q9HCM1 1747 aa16.92■□□□□ 0.3
SCAF8-205ENST00000464628 HTRA3P83110 453 aa16.91■□□□□ 0.3
SCAF8-205ENST00000464628 LTN1O94822 1766 aa16.91■□□□□ 0.3
SCAF8-205ENST00000464628 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
SCAF8-205ENST00000464628 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
SCAF8-205ENST00000464628 CSB-PGBD3P0DP91 1061 aa16.9■□□□□ 0.3
SCAF8-205ENST00000464628 KCNQ4P56696 695 aa16.9■□□□□ 0.3
SCAF8-205ENST00000464628 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-205ENST00000464628 NSD2O96028 1365 aa16.89■□□□□ 0.29
SCAF8-205ENST00000464628 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
SCAF8-205ENST00000464628 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
SCAF8-205ENST00000464628 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
SCAF8-205ENST00000464628 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
SCAF8-205ENST00000464628 KIF13BQ9NQT8 1826 aa16.85■□□□□ 0.29
SCAF8-205ENST00000464628 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms