RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 AXIN2Q9Y2T1 843 aa21.93■■□□□ 1.1
SF3A3-203ENST00000461869 PEAK1Q9H792 1746 aa21.92■■□□□ 1.1
SF3A3-203ENST00000461869 WDR17Q8IZU2 1322 aa21.92■■□□□ 1.1
SF3A3-203ENST00000461869 YY1P25490 414 aa21.92■■□□□ 1.1
SF3A3-203ENST00000461869 BCL11BQ9C0K0 894 aaPredicted RBP21.92■■□□□ 1.1
SF3A3-203ENST00000461869 LRRC37A3O60309 1634 aa21.91■■□□□ 1.1
SF3A3-203ENST00000461869 PTF1AQ7RTS3 328 aa21.9■■□□□ 1.1
SF3A3-203ENST00000461869 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
SF3A3-203ENST00000461869 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
SF3A3-203ENST00000461869 CDCA7Q9BWT1 371 aaPredicted RBP21.9■■□□□ 1.1
SF3A3-203ENST00000461869 PIK3C2AO00443 1686 aa21.89■■□□□ 1.1
SF3A3-203ENST00000461869 DCAF8L1A6NGE4 600 aa21.89■■□□□ 1.09
SF3A3-203ENST00000461869 ARHGEF25Q86VW2 580 aa21.89■■□□□ 1.09
SF3A3-203ENST00000461869 MARCH10Q8NA82 808 aaPredicted RBP21.89■■□□□ 1.09
SF3A3-203ENST00000461869 KCNH5Q8NCM2 988 aa21.89■■□□□ 1.09
SF3A3-203ENST00000461869 COL18A1P39060 1754 aa21.89■■□□□ 1.09
SF3A3-203ENST00000461869 TTC21BQ7Z4L5 1316 aa21.88■■□□□ 1.09
SF3A3-203ENST00000461869 SOX12O15370 315 aa21.88■■□□□ 1.09
SF3A3-203ENST00000461869 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
SF3A3-203ENST00000461869 CPSF1Q10570 1443 aaKnown RBP21.88■■□□□ 1.09
SF3A3-203ENST00000461869 NINLQ9Y2I6 1382 aa21.87■■□□□ 1.09
SF3A3-203ENST00000461869 ANO8Q9HCE9 1232 aaPredicted RBP21.87■■□□□ 1.09
SF3A3-203ENST00000461869 RGPD3A6NKT7 1758 aaPredicted RBP21.87■■□□□ 1.09
SF3A3-203ENST00000461869 RGPD4Q7Z3J3 1758 aa21.87■■□□□ 1.09
SF3A3-203ENST00000461869 SBF2Q86WG5 1849 aa21.86■■□□□ 1.09
SF3A3-203ENST00000461869 CARD10Q9BWT7 1032 aa21.86■■□□□ 1.09
SF3A3-203ENST00000461869 PROM2Q8N271 834 aa21.85■■□□□ 1.09
SF3A3-203ENST00000461869 TTC21AQ8NDW8 1320 aa21.84■■□□□ 1.09
SF3A3-203ENST00000461869 BCL9O00512 1426 aa21.84■■□□□ 1.09
SF3A3-203ENST00000461869 EXOC5O00471 708 aa21.83■■□□□ 1.09
SF3A3-203ENST00000461869 PDGFDQ9GZP0 370 aaPredicted RBP21.83■■□□□ 1.09
SF3A3-203ENST00000461869 TRPM1Q7Z4N2 1603 aa21.83■■□□□ 1.08
SF3A3-203ENST00000461869 ROCK2O75116 1388 aaKnown RBP21.82■■□□□ 1.08
SF3A3-203ENST00000461869 WNK3Q9BYP7 1800 aa21.81■■□□□ 1.08
SF3A3-203ENST00000461869 KTN1Q86UP2 1357 aaKnown RBP21.8■■□□□ 1.08
SF3A3-203ENST00000461869 ZBTB7AO95365 584 aa21.8■■□□□ 1.08
SF3A3-203ENST00000461869 TXNRD1Q16881 649 aa21.8■■□□□ 1.08
SF3A3-203ENST00000461869 RGPD5Q99666 1765 aa21.79■■□□□ 1.08
SF3A3-203ENST00000461869 STK32BQ9NY57 414 aa21.79■■□□□ 1.08
SF3A3-203ENST00000461869 AKAP12Q02952 1782 aa21.79■■□□□ 1.08
SF3A3-203ENST00000461869 CASZ1Q86V15 1759 aa21.79■■□□□ 1.08
SF3A3-203ENST00000461869 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
SF3A3-203ENST00000461869 NFAT5O94916 1531 aa21.77■■□□□ 1.08
SF3A3-203ENST00000461869 ATF5Q9Y2D1 282 aaPredicted RBP21.77■■□□□ 1.08
SF3A3-203ENST00000461869 SLC15A2Q16348 729 aa21.76■■□□□ 1.07
SF3A3-203ENST00000461869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.07
SF3A3-203ENST00000461869 PTGER2P43116 358 aa21.75■■□□□ 1.07
SF3A3-203ENST00000461869 TNS2Q63HR2 1409 aa21.73■■□□□ 1.07
SF3A3-203ENST00000461869 ABCC6O95255 1503 aa21.72■■□□□ 1.07
SF3A3-203ENST00000461869 ACSBG1Q96GR2 724 aa21.72■■□□□ 1.07
SF3A3-203ENST00000461869 NLRP2Q9NX02 1062 aa21.72■■□□□ 1.07
SF3A3-203ENST00000461869 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
SF3A3-203ENST00000461869 ERBB3P21860 1342 aa21.71■■□□□ 1.07
SF3A3-203ENST00000461869 MYOM1P52179 1685 aa21.7■■□□□ 1.06
SF3A3-203ENST00000461869 NME9Q86XW9 330 aa21.7■■□□□ 1.06
SF3A3-203ENST00000461869 MTFR1LQ9H019 292 aa21.7■■□□□ 1.06
SF3A3-203ENST00000461869 IL2RBP14784 551 aa21.69■■□□□ 1.06
SF3A3-203ENST00000461869 TMC1Q8TDI8 760 aa21.69■■□□□ 1.06
SF3A3-203ENST00000461869 SYT17Q9BSW7 474 aa21.68■■□□□ 1.06
SF3A3-203ENST00000461869 FHDC1Q9C0D6 1143 aaPredicted RBP21.68■■□□□ 1.06
SF3A3-203ENST00000461869 MON2Q7Z3U7 1717 aa21.68■■□□□ 1.06
SF3A3-203ENST00000461869 SBNO2Q9Y2G9 1366 aa21.67■■□□□ 1.06
SF3A3-203ENST00000461869 HDGFL2Q7Z4V5 671 aaPredicted RBP21.67■■□□□ 1.06
SF3A3-203ENST00000461869 ANKRD24Q8TF21 1146 aa21.67■■□□□ 1.06
SF3A3-203ENST00000461869 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
SF3A3-203ENST00000461869 CD163L1Q9NR16 1453 aa21.65■■□□□ 1.06
SF3A3-203ENST00000461869 SGIP1Q9BQI5 828 aa21.65■■□□□ 1.06
SF3A3-203ENST00000461869 CARD11Q9BXL7 1154 aa21.65■■□□□ 1.06
SF3A3-203ENST00000461869 SLC12A5Q9H2X9 1139 aa21.65■■□□□ 1.06
SF3A3-203ENST00000461869 ZNF316A6NFI3 1004 aaPredicted RBP21.63■■□□□ 1.05
SF3A3-203ENST00000461869 ARXQ96QS3 562 aa21.62■■□□□ 1.05
SF3A3-203ENST00000461869 USP54Q70EL1 1684 aa21.62■■□□□ 1.05
SF3A3-203ENST00000461869 ZNF784Q8NCA9 323 aaPredicted RBP21.61■■□□□ 1.05
SF3A3-203ENST00000461869 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
SF3A3-203ENST00000461869 EDC4Q6P2E9 1401 aaKnown RBP21.61■■□□□ 1.05
SF3A3-203ENST00000461869 LTN1O94822 1766 aa21.61■■□□□ 1.05
SF3A3-203ENST00000461869 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
SF3A3-203ENST00000461869 DDX54Q8TDD1 881 aaKnown RBP21.59■■□□□ 1.05
SF3A3-203ENST00000461869 LRRC4BQ9NT99 713 aa21.59■■□□□ 1.05
SF3A3-203ENST00000461869 PAPPAQ13219 1627 aa21.58■■□□□ 1.05
SF3A3-203ENST00000461869 BTAF1O14981 1849 aa21.58■■□□□ 1.05
SF3A3-203ENST00000461869 IP6K1Q92551 441 aa21.58■■□□□ 1.05
SF3A3-203ENST00000461869 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
SF3A3-203ENST00000461869 A0A1W2PP64 1363 aa21.57■■□□□ 1.04
SF3A3-203ENST00000461869 SLC27A3Q5K4L6 730 aa21.55■■□□□ 1.04
SF3A3-203ENST00000461869 AKT1S1Q96B36 256 aa21.55■■□□□ 1.04
SF3A3-203ENST00000461869 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
SF3A3-203ENST00000461869 MAP3K5Q99683 1374 aa21.54■■□□□ 1.04
SF3A3-203ENST00000461869 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
SF3A3-203ENST00000461869 SLC16A10Q8TF71 515 aa21.52■■□□□ 1.04
SF3A3-203ENST00000461869 SYTL4Q96C24 671 aaPredicted RBP21.52■■□□□ 1.04
SF3A3-203ENST00000461869 PRIM1P49642 420 aaKnown RBP21.51■■□□□ 1.03
SF3A3-203ENST00000461869 GPR162Q16538 588 aa21.51■■□□□ 1.03
SF3A3-203ENST00000461869 COG3Q96JB2 828 aa21.51■■□□□ 1.03
SF3A3-203ENST00000461869 KAT6BQ8WYB5 2073 aa21.51■■□□□ 1.03
SF3A3-203ENST00000461869 KLHL34Q8N239 644 aa21.5■■□□□ 1.03
SF3A3-203ENST00000461869 TFCP2L1Q9NZI6 479 aa21.5■■□□□ 1.03
SF3A3-203ENST00000461869 POLD1P28340 1107 aa21.49■■□□□ 1.03
SF3A3-203ENST00000461869 AMPHP49418 695 aa21.49■■□□□ 1.03
SF3A3-203ENST00000461869 KCNQ4P56696 695 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms