RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 TOM1L2Q6ZVM7 507 aa25.38■■□□□ 1.65
SSB-206ENST00000461708 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
SSB-206ENST00000461708 CDCA7Q9BWT1 371 aaPredicted RBP25.38■■□□□ 1.65
SSB-206ENST00000461708 NFAT5O94916 1531 aa25.37■■□□□ 1.65
SSB-206ENST00000461708 USP54Q70EL1 1684 aa25.37■■□□□ 1.65
SSB-206ENST00000461708 USP31Q70CQ4 1352 aa25.37■■□□□ 1.65
SSB-206ENST00000461708 OVOS2A0A0G2JMS6 1433 aa25.37■■□□□ 1.65
SSB-206ENST00000461708 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
SSB-206ENST00000461708 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
SSB-206ENST00000461708 PEAK1Q9H792 1746 aa25.36■■□□□ 1.65
SSB-206ENST00000461708 RREB1Q92766 1687 aa25.36■■□□□ 1.65
SSB-206ENST00000461708 CD163L1Q9NR16 1453 aa25.35■■□□□ 1.65
SSB-206ENST00000461708 LRRC37A3O60309 1634 aa25.35■■□□□ 1.65
SSB-206ENST00000461708 R3HDM1Q15032 1099 aaKnown RBP25.35■■□□□ 1.65
SSB-206ENST00000461708 DDB1Q16531 1140 aa25.34■■□□□ 1.65
SSB-206ENST00000461708 CARD10Q9BWT7 1032 aa25.34■■□□□ 1.65
SSB-206ENST00000461708 WNK3Q9BYP7 1800 aa25.34■■□□□ 1.65
SSB-206ENST00000461708 RGPD5Q99666 1765 aa25.33■■□□□ 1.65
SSB-206ENST00000461708 BCL9O00512 1426 aa25.32■■□□□ 1.64
SSB-206ENST00000461708 SBF2Q86WG5 1849 aa25.3■■□□□ 1.64
SSB-206ENST00000461708 NUP188Q5SRE5 1749 aa25.3■■□□□ 1.64
SSB-206ENST00000461708 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
SSB-206ENST00000461708 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
SSB-206ENST00000461708 EDC4Q6P2E9 1401 aaKnown RBP25.29■■□□□ 1.64
SSB-206ENST00000461708 RGPD3A6NKT7 1758 aaPredicted RBP25.29■■□□□ 1.64
SSB-206ENST00000461708 RGPD4Q7Z3J3 1758 aa25.29■■□□□ 1.64
SSB-206ENST00000461708 SOX12O15370 315 aa25.29■■□□□ 1.64
SSB-206ENST00000461708 TERF2IPQ9NYB0 399 aa25.29■■□□□ 1.64
SSB-206ENST00000461708 CCDC7Q96M83 1385 aa25.29■■□□□ 1.64
SSB-206ENST00000461708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.28■■□□□ 1.64
SSB-206ENST00000461708 TMC1Q8TDI8 760 aa25.28■■□□□ 1.64
SSB-206ENST00000461708 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
SSB-206ENST00000461708 PLSCR1O15162 318 aa25.27■■□□□ 1.64
SSB-206ENST00000461708 CSB-PGBD3P0DP91 1061 aa25.27■■□□□ 1.64
SSB-206ENST00000461708 NBPF14Q5TI25 921 aa25.27■■□□□ 1.64
SSB-206ENST00000461708 NINLQ9Y2I6 1382 aa25.27■■□□□ 1.64
SSB-206ENST00000461708 NME9Q86XW9 330 aa25.26■■□□□ 1.63
SSB-206ENST00000461708 TRIM26Q12899 539 aaPredicted RBP25.25■■□□□ 1.63
SSB-206ENST00000461708 MARCH10Q8NA82 808 aaPredicted RBP25.25■■□□□ 1.63
SSB-206ENST00000461708 TESK2Q96S53 571 aa25.25■■□□□ 1.63
SSB-206ENST00000461708 BCL11BQ9C0K0 894 aaPredicted RBP25.25■■□□□ 1.63
SSB-206ENST00000461708 A0A1W2PP64 1363 aa25.23■■□□□ 1.63
SSB-206ENST00000461708 LTN1O94822 1766 aa25.22■■□□□ 1.63
SSB-206ENST00000461708 ERBB3P21860 1342 aa25.21■■□□□ 1.63
SSB-206ENST00000461708 EXOC5O00471 708 aa25.21■■□□□ 1.63
SSB-206ENST00000461708 ST20-MTHFSA0A0A6YYL1 179 aa25.2■■□□□ 1.62
SSB-206ENST00000461708 TNS2Q63HR2 1409 aa25.19■■□□□ 1.62
SSB-206ENST00000461708 PTF1AQ7RTS3 328 aa25.15■■□□□ 1.62
SSB-206ENST00000461708 NLRP2Q9NX02 1062 aa25.15■■□□□ 1.62
SSB-206ENST00000461708 IL2RBP14784 551 aa25.13■■□□□ 1.61
SSB-206ENST00000461708 ANKRD24Q8TF21 1146 aa25.13■■□□□ 1.61
SSB-206ENST00000461708 IP6K1Q92551 441 aa25.12■■□□□ 1.61
SSB-206ENST00000461708 PROM2Q8N271 834 aa25.11■■□□□ 1.61
SSB-206ENST00000461708 ANKRD36BQ8N2N9 1353 aa25.1■■□□□ 1.61
SSB-206ENST00000461708 FAM208AQ9UK61 1670 aaKnown RBP25.1■■□□□ 1.61
SSB-206ENST00000461708 COG3Q96JB2 828 aa25.09■■□□□ 1.61
SSB-206ENST00000461708 SPON1Q9HCB6 807 aa25.09■■□□□ 1.61
SSB-206ENST00000461708 NHSQ6T4R5 1651 aa25.08■■□□□ 1.61
SSB-206ENST00000461708 KCNQ2O43526 872 aa25.08■■□□□ 1.61
SSB-206ENST00000461708 TMF1P82094 1093 aa25.08■■□□□ 1.61
SSB-206ENST00000461708 USP47Q96K76 1375 aa25.07■■□□□ 1.6
SSB-206ENST00000461708 TXNRD1Q16881 649 aa25.06■■□□□ 1.6
SSB-206ENST00000461708 ANO8Q9HCE9 1232 aaPredicted RBP25.06■■□□□ 1.6
SSB-206ENST00000461708 TIMELESSQ9UNS1 1208 aa25.06■■□□□ 1.6
SSB-206ENST00000461708 CASZ1Q86V15 1759 aa25.04■■□□□ 1.6
SSB-206ENST00000461708 CDCA8Q53HL2 280 aa25.04■■□□□ 1.6
SSB-206ENST00000461708 MAP3K19Q56UN5 1328 aa25.04■■□□□ 1.6
SSB-206ENST00000461708 HOXC9P31274 260 aa25.01■■□□□ 1.59
SSB-206ENST00000461708 RTL1A6NKG5 1358 aa25.01■■□□□ 1.59
SSB-206ENST00000461708 KAT6BQ8WYB5 2073 aa25■■□□□ 1.59
SSB-206ENST00000461708 STK32BQ9NY57 414 aa25■■□□□ 1.59
SSB-206ENST00000461708 CLSPNQ9HAW4 1339 aa25■■□□□ 1.59
SSB-206ENST00000461708 FYB1O15117 783 aa24.99■■□□□ 1.59
SSB-206ENST00000461708 AMPHP49418 695 aa24.99■■□□□ 1.59
SSB-206ENST00000461708 PPP1R1BQ9UD71 204 aaPredicted RBP24.99■■□□□ 1.59
SSB-206ENST00000461708 SLC15A2Q16348 729 aa24.98■■□□□ 1.59
SSB-206ENST00000461708 BTAF1O14981 1849 aa24.98■■□□□ 1.59
SSB-206ENST00000461708 LTV1Q96GA3 475 aaPredicted RBP24.97■■□□□ 1.59
SSB-206ENST00000461708 ACSBG1Q96GR2 724 aa24.97■■□□□ 1.59
SSB-206ENST00000461708 KIF24Q5T7B8 1368 aa24.93■■□□□ 1.58
SSB-206ENST00000461708 FBLN1P23142 703 aa24.93■■□□□ 1.58
SSB-206ENST00000461708 PDGFDQ9GZP0 370 aaPredicted RBP24.93■■□□□ 1.58
SSB-206ENST00000461708 GGNBP2Q9H3C7 697 aa24.93■■□□□ 1.58
SSB-206ENST00000461708 PAPPAQ13219 1627 aa24.93■■□□□ 1.58
SSB-206ENST00000461708 KIF20BQ96Q89 1820 aa24.91■■□□□ 1.58
SSB-206ENST00000461708 CGNL1Q0VF96 1302 aa24.91■■□□□ 1.58
SSB-206ENST00000461708 RGPD2P0DJD1 1756 aa24.91■■□□□ 1.58
SSB-206ENST00000461708 DDX54Q8TDD1 881 aaKnown RBP24.91■■□□□ 1.58
SSB-206ENST00000461708 SMG6Q86US8 1419 aaKnown RBP24.89■■□□□ 1.58
SSB-206ENST00000461708 ZBTB7AO95365 584 aa24.89■■□□□ 1.58
SSB-206ENST00000461708 PTGER2P43116 358 aa24.89■■□□□ 1.58
SSB-206ENST00000461708 RRS1Q15050 365 aaKnown RBP24.89■■□□□ 1.58
SSB-206ENST00000461708 ZCRB1Q8TBF4 217 aaKnown RBP24.89■■□□□ 1.58
SSB-206ENST00000461708 INSRP06213 1382 aa24.89■■□□□ 1.57
SSB-206ENST00000461708 MEGF6O75095 1541 aa24.88■■□□□ 1.57
SSB-206ENST00000461708 SLC27A3Q5K4L6 730 aa24.88■■□□□ 1.57
SSB-206ENST00000461708 MTFR1LQ9H019 292 aa24.88■■□□□ 1.57
SSB-206ENST00000461708 MYOM1P52179 1685 aa24.88■■□□□ 1.57
SSB-206ENST00000461708 SHANK3Q9BYB0 1731 aa24.87■■□□□ 1.57
SSB-206ENST00000461708 NBPF6Q5VWK0 638 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms