RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 TSR2Q969E8 191 aaKnown RBP5.28□□□□□ -1.56
ATP13A3-206ENST00000461660 RSPH6AQ9H0K4 717 aa5.28□□□□□ -1.56
ATP13A3-206ENST00000461660 EXOSC9Q06265 439 aaKnown RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 AEBP1Q8IUX7 1158 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 ZBTB47Q9UFB7 747 aaPredicted RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 USP32Q8NFA0 1604 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 ELL2O00472 640 aaPredicted RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 CT47B1P0C2W7 299 aaPredicted RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 HOXC9P31274 260 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 EVA1CP58658 441 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 TEFQ10587 303 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 PLEKHO1Q53GL0 409 aaPredicted RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 SLAIN2Q9P270 581 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 EXOC6Q8TAG9 804 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 IP6K1Q92551 441 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 THUMPD2Q9BTF0 503 aaKnown RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 CHMP4AQ9BY43 222 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 CHMP4BQ9H444 224 aaKnown RBP5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 IL16Q14005 1332 aa5.27□□□□□ -1.57
ATP13A3-206ENST00000461660 ADGRB2O60241 1585 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 NCBP3Q53F19 620 aaKnown RBP5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 ZKSCAN2Q63HK3 967 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 ZNF530Q6P9A1 599 aaPredicted RBP5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 POTEHQ6S545 545 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 CLUAP1Q96AJ1 413 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 CRBNQ96SW2 442 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 TSPYL4Q9UJ04 414 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 USP31Q70CQ4 1352 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 USHBP1Q8N6Y0 703 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 PHACTR3Q96KR7 559 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 EYA1Q99502 592 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 STK31Q9BXU1 1019 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 KIF16BQ96L93 1317 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 FANCIQ9NVI1 1328 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 PNPLA6Q8IY17 1366 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 ZNF142P52746 1687 aaPredicted RBP5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 C1orf167Q5SNV9 1468 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 OVOS2A0A0J9YW53 1432 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 OVOS2Q6IE36 1432 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 ARHGEF10O15013 1369 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 KIF24Q5T7B8 1368 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 A0A0G2JS52 829 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 TATP17735 454 aaPredicted RBP5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 ANKRD24Q8TF21 1146 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 IFT57Q9NWB7 429 aa5.26□□□□□ -1.57
ATP13A3-206ENST00000461660 DDX17Q92841 729 aaKnown RBP5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 NCOA3Q9Y6Q9 1424 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 BCAR3O75815 825 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 DCTN1Q14203 1278 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 ITPRIPQ8IWB1 547 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 CABLES1Q8TDN4 633 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 SETD1AO15047 1707 aaKnown RBP5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 LMTK3Q96Q04 1460 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 RTL1A6NKG5 1358 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 ITSN1Q15811 1721 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 ZNF521Q96K83 1311 aa5.25□□□□□ -1.57
ATP13A3-206ENST00000461660 GNAT3A8MTJ3 354 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 PIP4K2BP78356 416 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 CHRNA2Q15822 529 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 TWISTNBQ3B726 338 aaPredicted RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 TOM1L2Q6ZVM7 507 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 MCM10Q7L590 875 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 ZNF428Q96B54 188 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 DCCP43146 1447 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 XRN1Q8IZH2 1706 aaKnown RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 PDE3AQ14432 1141 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 AMOTQ4VCS5 1084 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 PLEKHF1Q96S99 279 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 SPINK5Q9NQ38 1064 aaPredicted RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 STRN4Q9NRL3 753 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 COG6Q9Y2V7 657 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 TCERG1O14776 1098 aaKnown RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 TOM1O60784 492 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 RARSP54136 660 aaKnown RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 BRINP3Q76B58 766 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 DZIP1LQ8IYY4 767 aaKnown RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 API5Q9BZZ5 524 aaKnown RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 TRIM35Q9UPQ4 493 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 SPG7Q9UQ90 795 aa5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 CCDC9Q9Y3X0 531 aaKnown RBP5.24□□□□□ -1.57
ATP13A3-206ENST00000461660 FAM83GA6ND36 823 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 ARHGEF25Q86VW2 580 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 LRRC59Q96AG4 307 aaKnown RBP5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 CFAP44Q96MT7 982 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 IGSF1Q8N6C5 1336 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 MTHFSDQ2M296 383 aaKnown RBP5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 PANK1Q8TE04 598 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 BCL11AQ9H165 835 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 MYT1Q01538 1121 aa5.23□□□□□ -1.57
ATP13A3-206ENST00000461660 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 HTATSF1O43719 755 aaKnown RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 NPM2Q86SE8 214 aaKnown RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 SSH1Q8WYL5 1049 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 MBIPQ9NS73 344 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 USP35Q9P2H5 1018 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 SPATA31A3Q5VYP0 1347 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 KIF20BQ96Q89 1820 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 MST1RQ04912 1400 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 SSH2Q76I76 1423 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms