RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-204ENST00000461507 USP35Q9P2H5 1018 aa17.93■□□□□ 0.46
FDPS-204ENST00000461507 PARD3Q8TEW0 1356 aa17.92■□□□□ 0.46
FDPS-204ENST00000461507 RGPD3A6NKT7 1758 aaPredicted RBP17.92■□□□□ 0.46
FDPS-204ENST00000461507 RGPD4Q7Z3J3 1758 aa17.92■□□□□ 0.46
FDPS-204ENST00000461507 WDR17Q8IZU2 1322 aa17.92■□□□□ 0.46
FDPS-204ENST00000461507 SRCAPQ6ZRS2 3230 aa17.92■□□□□ 0.46
FDPS-204ENST00000461507 LTN1O94822 1766 aa17.91■□□□□ 0.46
FDPS-204ENST00000461507 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
FDPS-204ENST00000461507 EDC4Q6P2E9 1401 aaKnown RBP17.91■□□□□ 0.46
FDPS-204ENST00000461507 NUP188Q5SRE5 1749 aa17.91■□□□□ 0.46
FDPS-204ENST00000461507 NINLQ9Y2I6 1382 aa17.9■□□□□ 0.46
FDPS-204ENST00000461507 EN1Q05925 392 aaPredicted RBP17.89■□□□□ 0.45
FDPS-204ENST00000461507 PDE3BQ13370 1112 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 TESK2Q96S53 571 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 TIMELESSQ9UNS1 1208 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.45
FDPS-204ENST00000461507 A0A1W2PP64 1363 aa17.88■□□□□ 0.45
FDPS-204ENST00000461507 C11orf95C9JLR9 678 aaPredicted RBP17.87■□□□□ 0.45
FDPS-204ENST00000461507 TRIM37O94972 964 aa17.87■□□□□ 0.45
FDPS-204ENST00000461507 CAMKK2Q96RR4 588 aa17.87■□□□□ 0.45
FDPS-204ENST00000461507 BCL9O00512 1426 aa17.87■□□□□ 0.45
FDPS-204ENST00000461507 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
FDPS-204ENST00000461507 TOM1L2Q6ZVM7 507 aa17.85■□□□□ 0.45
FDPS-204ENST00000461507 CDCA7Q9BWT1 371 aaPredicted RBP17.85■□□□□ 0.45
FDPS-204ENST00000461507 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
FDPS-204ENST00000461507 NME9Q86XW9 330 aa17.84■□□□□ 0.45
FDPS-204ENST00000461507 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
FDPS-204ENST00000461507 SLC12A5Q9H2X9 1139 aa17.84■□□□□ 0.45
FDPS-204ENST00000461507 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
FDPS-204ENST00000461507 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.45
FDPS-204ENST00000461507 CCDC7Q96M83 1385 aa17.83■□□□□ 0.45
FDPS-204ENST00000461507 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
FDPS-204ENST00000461507 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.44
FDPS-204ENST00000461507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.83■□□□□ 0.44
FDPS-204ENST00000461507 USP47Q96K76 1375 aa17.82■□□□□ 0.44
FDPS-204ENST00000461507 ST20-MTHFSA0A0A6YYL1 179 aa17.82■□□□□ 0.44
FDPS-204ENST00000461507 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
FDPS-204ENST00000461507 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
FDPS-204ENST00000461507 ERBB3P21860 1342 aa17.81■□□□□ 0.44
FDPS-204ENST00000461507 APBA3O96018 575 aa17.81■□□□□ 0.44
FDPS-204ENST00000461507 DDB1Q16531 1140 aa17.81■□□□□ 0.44
FDPS-204ENST00000461507 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
FDPS-204ENST00000461507 SOX12O15370 315 aa17.8■□□□□ 0.44
FDPS-204ENST00000461507 ANKRD36BQ8N2N9 1353 aa17.79■□□□□ 0.44
FDPS-204ENST00000461507 MYOM1P52179 1685 aa17.78■□□□□ 0.44
FDPS-204ENST00000461507 NHSQ6T4R5 1651 aa17.78■□□□□ 0.44
FDPS-204ENST00000461507 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.44
FDPS-204ENST00000461507 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
FDPS-204ENST00000461507 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
FDPS-204ENST00000461507 KIF20BQ96Q89 1820 aa17.75■□□□□ 0.43
FDPS-204ENST00000461507 PLSCR1O15162 318 aa17.74■□□□□ 0.43
FDPS-204ENST00000461507 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
FDPS-204ENST00000461507 TMF1P82094 1093 aa17.73■□□□□ 0.43
FDPS-204ENST00000461507 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
FDPS-204ENST00000461507 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
FDPS-204ENST00000461507 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
FDPS-204ENST00000461507 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
FDPS-204ENST00000461507 IP6K1Q92551 441 aa17.71■□□□□ 0.43
FDPS-204ENST00000461507 EXOC5O00471 708 aa17.7■□□□□ 0.42
FDPS-204ENST00000461507 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
FDPS-204ENST00000461507 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
FDPS-204ENST00000461507 SHANK3Q9BYB0 1731 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 RGPD2P0DJD1 1756 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 IL2RBP14784 551 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 COG3Q96JB2 828 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
FDPS-204ENST00000461507 BTAF1O14981 1849 aa17.68■□□□□ 0.42
FDPS-204ENST00000461507 CDCA8Q53HL2 280 aa17.68■□□□□ 0.42
FDPS-204ENST00000461507 PAPPAQ13219 1627 aa17.68■□□□□ 0.42
FDPS-204ENST00000461507 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
FDPS-204ENST00000461507 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
FDPS-204ENST00000461507 FYB1O15117 783 aa17.65■□□□□ 0.42
FDPS-204ENST00000461507 HOXC9P31274 260 aa17.65■□□□□ 0.42
FDPS-204ENST00000461507 PROM2Q8N271 834 aa17.65■□□□□ 0.42
FDPS-204ENST00000461507 ANO8Q9HCE9 1232 aaPredicted RBP17.64■□□□□ 0.41
FDPS-204ENST00000461507 KIF24Q5T7B8 1368 aa17.64■□□□□ 0.41
FDPS-204ENST00000461507 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
FDPS-204ENST00000461507 MEGF6O75095 1541 aa17.62■□□□□ 0.41
FDPS-204ENST00000461507 KCNQ2O43526 872 aa17.61■□□□□ 0.41
FDPS-204ENST00000461507 FBLN1P23142 703 aa17.6■□□□□ 0.41
FDPS-204ENST00000461507 AMPHP49418 695 aa17.6■□□□□ 0.41
FDPS-204ENST00000461507 TXNRD1Q16881 649 aa17.6■□□□□ 0.41
FDPS-204ENST00000461507 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
FDPS-204ENST00000461507 NSD3Q9BZ95 1437 aa17.6■□□□□ 0.41
FDPS-204ENST00000461507 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
FDPS-204ENST00000461507 INSRP06213 1382 aa17.59■□□□□ 0.41
FDPS-204ENST00000461507 FLT4P35916 1363 aa17.59■□□□□ 0.41
FDPS-204ENST00000461507 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
FDPS-204ENST00000461507 LY75O60449 1722 aa17.58■□□□□ 0.41
FDPS-204ENST00000461507 NCAPD2Q15021 1401 aa17.58■□□□□ 0.41
FDPS-204ENST00000461507 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
FDPS-204ENST00000461507 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
FDPS-204ENST00000461507 KAT6BQ8WYB5 2073 aa17.57■□□□□ 0.4
FDPS-204ENST00000461507 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
FDPS-204ENST00000461507 SPON1Q9HCB6 807 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms