RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 FAM217BQ9NTX9 383 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-203ENST00000460620 NKAPLQ5M9Q1 402 aa5.47□□□□□ -1.53
PTPN22-203ENST00000460620 RNF19BQ6ZMZ0 732 aa5.47□□□□□ -1.53
PTPN22-203ENST00000460620 HOXA2O43364 376 aa5.46□□□□□ -1.54
PTPN22-203ENST00000460620 ZMYND10O75800 440 aa5.46□□□□□ -1.54
PTPN22-203ENST00000460620 WDR4P57081 412 aaKnown RBP5.46□□□□□ -1.54
PTPN22-203ENST00000460620 GRIN2CQ14957 1233 aa5.46□□□□□ -1.54
PTPN22-203ENST00000460620 DYRK3O43781 588 aa5.45□□□□□ -1.54
PTPN22-203ENST00000460620 BMP2P12643 396 aa5.45□□□□□ -1.54
PTPN22-203ENST00000460620 GATA4P43694 442 aa5.45□□□□□ -1.54
PTPN22-203ENST00000460620 MMP16P51512 607 aa5.45□□□□□ -1.54
PTPN22-203ENST00000460620 USB1Q9BQ65 265 aaKnown RBP5.45□□□□□ -1.54
PTPN22-203ENST00000460620 NNTQ13423 1086 aa5.44□□□□□ -1.54
PTPN22-203ENST00000460620 NUTM1Q86Y26 1132 aa5.44□□□□□ -1.54
PTPN22-203ENST00000460620 ZC3H15Q8WU90 426 aaKnown RBP5.44□□□□□ -1.54
PTPN22-203ENST00000460620 PLEKHG3A1L390 1219 aa5.44□□□□□ -1.54
PTPN22-203ENST00000460620 DXOO77932 396 aaKnown RBP5.44□□□□□ -1.54
PTPN22-203ENST00000460620 CHRNA4P43681 627 aa5.44□□□□□ -1.54
PTPN22-203ENST00000460620 AMHR2Q16671 573 aa5.44□□□□□ -1.54
PTPN22-203ENST00000460620 SSTR3P32745 418 aaPredicted RBP5.42□□□□□ -1.54
PTPN22-203ENST00000460620 MBIPQ9NS73 344 aa5.42□□□□□ -1.54
PTPN22-203ENST00000460620 SLC35F4A4IF30 521 aa5.42□□□□□ -1.54
PTPN22-203ENST00000460620 TTLL12Q14166 644 aaPredicted RBP5.42□□□□□ -1.54
PTPN22-203ENST00000460620 PRSS36Q5K4E3 855 aa5.42□□□□□ -1.54
PTPN22-203ENST00000460620 HLA-CQ95604 372 aa5.42□□□□□ -1.54
PTPN22-203ENST00000460620 IRAK1P51617 712 aa5.41□□□□□ -1.54
PTPN22-203ENST00000460620 SNRPNP63162 240 aaKnown RBP5.41□□□□□ -1.54
PTPN22-203ENST00000460620 JUNDP17535 347 aa5.4□□□□□ -1.54
PTPN22-203ENST00000460620 RETREG3Q86VR2 466 aa5.4□□□□□ -1.54
PTPN22-203ENST00000460620 FDX1P10109 184 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 GUCA2AQ02747 115 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 GAS6Q14393 721 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 GIGYF2Q6Y7W6 1299 aaKnown RBP5.39□□□□□ -1.55
PTPN22-203ENST00000460620 MPNDQ8N594 471 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 SPIRE2Q8WWL2 714 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 DIXDC1Q155Q3 683 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 AK7Q96M32 723 aa5.39□□□□□ -1.55
PTPN22-203ENST00000460620 IGF1RP08069 1367 aa5.38□□□□□ -1.55
PTPN22-203ENST00000460620 ELNP15502 786 aa5.38□□□□□ -1.55
PTPN22-203ENST00000460620 LINC00528Q8N1L1 170 aa5.38□□□□□ -1.55
PTPN22-203ENST00000460620 CCDC24Q8N4L8 307 aa5.38□□□□□ -1.55
PTPN22-203ENST00000460620 TRIM66O15016 1216 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 GJA5P36382 358 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 KLF16Q9BXK1 252 aaPredicted RBP5.37□□□□□ -1.55
PTPN22-203ENST00000460620 PCDHGC3Q9UN70 934 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 SPDYE5A6NIY4 337 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 C6orf229H3BNL8 230 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 OIP5O43482 229 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 FBLN7Q53RD9 439 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 SYMPKQ92797 1274 aaKnown RBP5.37□□□□□ -1.55
PTPN22-203ENST00000460620 ACDQ96AP0 544 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 BEGAINQ9BUH8 593 aa5.37□□□□□ -1.55
PTPN22-203ENST00000460620 MOXD2PA6NHM9 499 aa5.36□□□□□ -1.55
PTPN22-203ENST00000460620 PARP9Q8IXQ6 854 aa5.36□□□□□ -1.55
PTPN22-203ENST00000460620 NUDT12Q9BQG2 462 aa5.36□□□□□ -1.55
PTPN22-203ENST00000460620 MS4A1P11836 297 aa5.35□□□□□ -1.55
PTPN22-203ENST00000460620 NOP53Q9NZM5 478 aaKnown RBP5.35□□□□□ -1.55
PTPN22-203ENST00000460620 CCNYL3P0C7X3 344 aa5.34□□□□□ -1.55
PTPN22-203ENST00000460620 NDUFV2P19404 249 aa5.34□□□□□ -1.55
PTPN22-203ENST00000460620 MTMR2Q13614 643 aa5.34□□□□□ -1.55
PTPN22-203ENST00000460620 PTPRNQ16849 979 aa5.34□□□□□ -1.55
PTPN22-203ENST00000460620 DESI1Q6ICB0 168 aa5.34□□□□□ -1.55
PTPN22-203ENST00000460620 TBC1D2Q9BYX2 928 aa5.34□□□□□ -1.55
PTPN22-203ENST00000460620 TTLL8A6PVC2 850 aa5.34□□□□□ -1.56
PTPN22-203ENST00000460620 RSBN1LQ6PCB5 846 aaPredicted RBP5.33□□□□□ -1.56
PTPN22-203ENST00000460620 PRR7Q8TB68 274 aa5.33□□□□□ -1.56
PTPN22-203ENST00000460620 SPTLC1O15269 473 aa5.32□□□□□ -1.56
PTPN22-203ENST00000460620 TAL1P17542 331 aaPredicted RBP5.32□□□□□ -1.56
PTPN22-203ENST00000460620 PDE4DQ08499 809 aa5.32□□□□□ -1.56
PTPN22-203ENST00000460620 EVA1BQ9NVM1 165 aa5.32□□□□□ -1.56
PTPN22-203ENST00000460620 PRPF38BQ5VTL8 546 aaKnown RBP5.32□□□□□ -1.56
PTPN22-203ENST00000460620 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
PTPN22-203ENST00000460620 ZIC2O95409 532 aaPredicted RBP5.31□□□□□ -1.56
PTPN22-203ENST00000460620 KCNH2Q12809 1159 aa5.31□□□□□ -1.56
PTPN22-203ENST00000460620 PTCRAQ6ISU1 281 aaPredicted RBP5.31□□□□□ -1.56
PTPN22-203ENST00000460620 MEIOBQ8N635 442 aa5.31□□□□□ -1.56
PTPN22-203ENST00000460620 ZBTB3Q9H5J0 574 aa5.31□□□□□ -1.56
PTPN22-203ENST00000460620 GNB5O14775 395 aa5.3□□□□□ -1.56
PTPN22-203ENST00000460620 TUSC1Q2TAM9 212 aa5.3□□□□□ -1.56
PTPN22-203ENST00000460620 RIC3Q7Z5B4 369 aa5.3□□□□□ -1.56
PTPN22-203ENST00000460620 SUV39H2Q9H5I1 410 aa5.3□□□□□ -1.56
PTPN22-203ENST00000460620 RRAGCQ9HB90 399 aa5.3□□□□□ -1.56
PTPN22-203ENST00000460620 LYPD8Q6UX82 237 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 UNC93B1Q9H1C4 597 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 SLC24A3Q9HC58 644 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 NSFL1CQ9UNZ2 370 aaKnown RBP5.29□□□□□ -1.56
PTPN22-203ENST00000460620 HRCP23327 699 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 SH3BP2P78314 561 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 TSEN34Q9BSV6 310 aaKnown RBP5.29□□□□□ -1.56
PTPN22-203ENST00000460620 TPSG1Q9NRR2 321 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 PCDHB15Q9Y5E8 787 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 TLL2Q9Y6L7 1015 aa5.29□□□□□ -1.56
PTPN22-203ENST00000460620 MYSM1Q5VVJ2 828 aa5.27□□□□□ -1.57
PTPN22-203ENST00000460620 ZFAND3Q9H8U3 227 aa5.27□□□□□ -1.57
PTPN22-203ENST00000460620 CFAP99D6REC4 459 aa5.27□□□□□ -1.57
PTPN22-203ENST00000460620 VARSP26640 1264 aaKnown RBP5.27□□□□□ -1.57
PTPN22-203ENST00000460620 FOXR1Q6PIV2 292 aa5.27□□□□□ -1.57
PTPN22-203ENST00000460620 ZNF511Q8NB15 262 aa5.27□□□□□ -1.57
PTPN22-203ENST00000460620 BAP1Q92560 729 aa5.27□□□□□ -1.57
PTPN22-203ENST00000460620 RSPH6AQ9H0K4 717 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms