RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
ABCA4-202ENST00000460514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.35□□□□□ -0.75
ABCA4-202ENST00000460514 MARVELD3Q96A59 401 aa10.35□□□□□ -0.75
ABCA4-202ENST00000460514 CARD14Q9BXL6 1004 aa10.35□□□□□ -0.75
ABCA4-202ENST00000460514 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
ABCA4-202ENST00000460514 ARHGEF10O15013 1369 aa10.35□□□□□ -0.75
ABCA4-202ENST00000460514 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
ABCA4-202ENST00000460514 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-202ENST00000460514 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-202ENST00000460514 ABTB2Q8N961 1025 aa10.34□□□□□ -0.75
ABCA4-202ENST00000460514 LRRC59Q96AG4 307 aaKnown RBP10.34□□□□□ -0.75
ABCA4-202ENST00000460514 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-202ENST00000460514 NPC1L1Q9UHC9 1359 aa10.34□□□□□ -0.75
ABCA4-202ENST00000460514 PXDNQ92626 1479 aa10.34□□□□□ -0.75
ABCA4-202ENST00000460514 NRKQ7Z2Y5 1582 aa10.34□□□□□ -0.75
ABCA4-202ENST00000460514 TNS3Q68CZ2 1445 aa10.33□□□□□ -0.76
ABCA4-202ENST00000460514 PHLPP1O60346 1717 aa10.33□□□□□ -0.76
ABCA4-202ENST00000460514 LMOD2Q6P5Q4 547 aa10.33□□□□□ -0.76
ABCA4-202ENST00000460514 NLRP13Q86W25 1043 aa10.33□□□□□ -0.76
ABCA4-202ENST00000460514 DDX17Q92841 729 aaKnown RBP10.33□□□□□ -0.76
ABCA4-202ENST00000460514 COG3Q96JB2 828 aa10.33□□□□□ -0.76
ABCA4-202ENST00000460514 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
ABCA4-202ENST00000460514 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
ABCA4-202ENST00000460514 FBXO41Q8TF61 875 aa10.32□□□□□ -0.76
ABCA4-202ENST00000460514 KIF12Q96FN5 646 aa10.32□□□□□ -0.76
ABCA4-202ENST00000460514 KIF20BQ96Q89 1820 aa10.32□□□□□ -0.76
ABCA4-202ENST00000460514 USP31Q70CQ4 1352 aa10.31□□□□□ -0.76
ABCA4-202ENST00000460514 FYB1O15117 783 aa10.31□□□□□ -0.76
ABCA4-202ENST00000460514 ANP32CO43423 234 aa10.31□□□□□ -0.76
ABCA4-202ENST00000460514 NLRP6P59044 892 aa10.31□□□□□ -0.76
ABCA4-202ENST00000460514 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
ABCA4-202ENST00000460514 SNPHO15079 494 aa10.3□□□□□ -0.76
ABCA4-202ENST00000460514 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
ABCA4-202ENST00000460514 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
ABCA4-202ENST00000460514 NME9Q86XW9 330 aa10.3□□□□□ -0.76
ABCA4-202ENST00000460514 GGNBP2Q9H3C7 697 aa10.3□□□□□ -0.76
ABCA4-202ENST00000460514 ALS2Q96Q42 1657 aa10.3□□□□□ -0.76
ABCA4-202ENST00000460514 COL16A1Q07092 1604 aaPredicted RBP10.29□□□□□ -0.76
ABCA4-202ENST00000460514 PIK3C2AO00443 1686 aa10.29□□□□□ -0.76
ABCA4-202ENST00000460514 RALBP1Q15311 655 aa10.29□□□□□ -0.76
ABCA4-202ENST00000460514 CC2D1BQ5T0F9 858 aaKnown RBP10.29□□□□□ -0.76
ABCA4-202ENST00000460514 IER5LQ5T953 404 aa10.29□□□□□ -0.76
ABCA4-202ENST00000460514 KCNH5Q8NCM2 988 aa10.29□□□□□ -0.76
ABCA4-202ENST00000460514 ANKRD26Q9UPS8 1709 aa10.29□□□□□ -0.76
ABCA4-202ENST00000460514 USP54Q70EL1 1684 aa10.28□□□□□ -0.76
ABCA4-202ENST00000460514 JCADQ9P266 1359 aa10.28□□□□□ -0.76
ABCA4-202ENST00000460514 OVOS2A0A0J9YW53 1432 aa10.28□□□□□ -0.76
ABCA4-202ENST00000460514 OVOS2Q6IE36 1432 aa10.28□□□□□ -0.76
ABCA4-202ENST00000460514 TTLL13PA6NNM8 815 aa10.28□□□□□ -0.76
ABCA4-202ENST00000460514 HAP1P54257 671 aaPredicted RBP10.28□□□□□ -0.76
ABCA4-202ENST00000460514 MED1Q15648 1581 aaPredicted RBP10.27□□□□□ -0.76
ABCA4-202ENST00000460514 HSPA1LP34931 641 aa10.27□□□□□ -0.77
ABCA4-202ENST00000460514 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.77
ABCA4-202ENST00000460514 NUTM2GQ5VZR2 741 aa10.27□□□□□ -0.77
ABCA4-202ENST00000460514 USP19O94966 1318 aa10.27□□□□□ -0.77
ABCA4-202ENST00000460514 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
ABCA4-202ENST00000460514 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
ABCA4-202ENST00000460514 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
ABCA4-202ENST00000460514 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
ABCA4-202ENST00000460514 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-202ENST00000460514 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
ABCA4-202ENST00000460514 SLIT3O75094 1523 aa10.25□□□□□ -0.77
ABCA4-202ENST00000460514 GCP02774 474 aa10.25□□□□□ -0.77
ABCA4-202ENST00000460514 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-202ENST00000460514 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
ABCA4-202ENST00000460514 AATKQ6ZMQ8 1374 aa10.25□□□□□ -0.77
ABCA4-202ENST00000460514 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
ABCA4-202ENST00000460514 PHRF1Q9P1Y6 1649 aaKnown RBP10.23□□□□□ -0.77
ABCA4-202ENST00000460514 SOX12O15370 315 aa10.23□□□□□ -0.77
ABCA4-202ENST00000460514 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
ABCA4-202ENST00000460514 TNNT2P45379 298 aaPredicted RBP10.23□□□□□ -0.77
ABCA4-202ENST00000460514 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
ABCA4-202ENST00000460514 KIF24Q5T7B8 1368 aa10.23□□□□□ -0.77
ABCA4-202ENST00000460514 MARF1Q9Y4F3 1742 aaKnown RBP10.22□□□□□ -0.77
ABCA4-202ENST00000460514 CABLES1Q8TDN4 633 aa10.22□□□□□ -0.77
ABCA4-202ENST00000460514 CFAP53Q96M91 514 aa10.22□□□□□ -0.77
ABCA4-202ENST00000460514 CPDO75976 1380 aa10.22□□□□□ -0.77
ABCA4-202ENST00000460514 NFAT5O94916 1531 aa10.22□□□□□ -0.77
ABCA4-202ENST00000460514 CRYBG1Q9Y4K1 1723 aa10.21□□□□□ -0.77
ABCA4-202ENST00000460514 MAP3K13O43283 966 aa10.21□□□□□ -0.77
ABCA4-202ENST00000460514 PPP2R1AP30153 589 aa10.21□□□□□ -0.77
ABCA4-202ENST00000460514 AMPHP49418 695 aa10.21□□□□□ -0.77
ABCA4-202ENST00000460514 PRDM11Q9NQV5 511 aa10.21□□□□□ -0.77
ABCA4-202ENST00000460514 RTL1A6NKG5 1358 aa10.21□□□□□ -0.78
ABCA4-202ENST00000460514 ABCA3Q99758 1704 aa10.21□□□□□ -0.78
ABCA4-202ENST00000460514 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 NUTM2BA6NNL0 878 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-202ENST00000460514 NUTM2EB1AL46 878 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-202ENST00000460514 PPM1GO15355 546 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-202ENST00000460514 ABCC6O95255 1503 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 MAP2P11137 1827 aaKnown RBP10.2□□□□□ -0.78
ABCA4-202ENST00000460514 FLT4P35916 1363 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 EMP3P54852 163 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 ZC3H6P61129 1189 aaKnown RBP10.2□□□□□ -0.78
ABCA4-202ENST00000460514 ARHGEF25Q86VW2 580 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-202ENST00000460514 POLKQ9UBT6 870 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
ABCA4-202ENST00000460514 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
ABCA4-202ENST00000460514 KIAA0232Q92628 1395 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms