RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 A0A1W2PP64 1363 aa24.49■■□□□ 1.51
SCARNA2-201ENST00000458748 ZBTB7CA1YPR0 619 aa24.48■■□□□ 1.51
SCARNA2-201ENST00000458748 NFAT5O94916 1531 aa24.48■■□□□ 1.51
SCARNA2-201ENST00000458748 ABCC6O95255 1503 aa24.47■■□□□ 1.51
SCARNA2-201ENST00000458748 CRB1P82279 1406 aa24.47■■□□□ 1.51
SCARNA2-201ENST00000458748 BAG6P46379 1132 aa24.47■■□□□ 1.51
SCARNA2-201ENST00000458748 NME9Q86XW9 330 aa24.44■■□□□ 1.5
SCARNA2-201ENST00000458748 AXIN2Q9Y2T1 843 aa24.43■■□□□ 1.5
SCARNA2-201ENST00000458748 RGPD5Q99666 1765 aa24.43■■□□□ 1.5
SCARNA2-201ENST00000458748 WDR17Q8IZU2 1322 aa24.42■■□□□ 1.5
SCARNA2-201ENST00000458748 RGPD1P0DJD0 1748 aa24.42■■□□□ 1.5
SCARNA2-201ENST00000458748 PARP4Q9UKK3 1724 aaKnown RBP24.42■■□□□ 1.5
SCARNA2-201ENST00000458748 SOX12O15370 315 aa24.42■■□□□ 1.5
SCARNA2-201ENST00000458748 SRCAPQ6ZRS2 3230 aa24.42■■□□□ 1.5
SCARNA2-201ENST00000458748 EN1Q05925 392 aaPredicted RBP24.41■■□□□ 1.5
SCARNA2-201ENST00000458748 ANKRD36BQ8N2N9 1353 aa24.41■■□□□ 1.5
SCARNA2-201ENST00000458748 PDE3BQ13370 1112 aa24.4■■□□□ 1.5
SCARNA2-201ENST00000458748 FAM196AQ6ZSG2 479 aa24.4■■□□□ 1.5
SCARNA2-201ENST00000458748 TOM1L2Q6ZVM7 507 aa24.4■■□□□ 1.5
SCARNA2-201ENST00000458748 EIF4G2P78344 907 aaKnown RBP eCLIP24.39■■□□□ 1.49not detected■■■■■ 62.3
SCARNA2-201ENST00000458748 LTN1O94822 1766 aa24.39■■□□□ 1.49
SCARNA2-201ENST00000458748 OVOS2A0A0J9YW53 1432 aa24.38■■□□□ 1.49
SCARNA2-201ENST00000458748 OVOS2Q6IE36 1432 aa24.38■■□□□ 1.49
SCARNA2-201ENST00000458748 PSDA5PKW4 1024 aaPredicted RBP24.37■■□□□ 1.49
SCARNA2-201ENST00000458748 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
SCARNA2-201ENST00000458748 TRIM37O94972 964 aa24.36■■□□□ 1.49
SCARNA2-201ENST00000458748 CDCA7Q9BWT1 371 aaPredicted RBP24.36■■□□□ 1.49
SCARNA2-201ENST00000458748 WNK3Q9BYP7 1800 aa24.35■■□□□ 1.49
SCARNA2-201ENST00000458748 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
SCARNA2-201ENST00000458748 COG3Q96JB2 828 aa24.35■■□□□ 1.49
SCARNA2-201ENST00000458748 CARD10Q9BWT7 1032 aa24.35■■□□□ 1.49
SCARNA2-201ENST00000458748 TNS1Q9HBL0 1735 aaKnown RBP24.35■■□□□ 1.49
SCARNA2-201ENST00000458748 DISP2A7MBM2 1401 aa24.33■■□□□ 1.49
SCARNA2-201ENST00000458748 EZH2Q15910 746 aaKnown RBP24.32■■□□□ 1.48
SCARNA2-201ENST00000458748 CCDC7Q96M83 1385 aa24.31■■□□□ 1.48
SCARNA2-201ENST00000458748 LRRC37A3O60309 1634 aa24.31■■□□□ 1.48
SCARNA2-201ENST00000458748 DDB1Q16531 1140 aa24.3■■□□□ 1.48
SCARNA2-201ENST00000458748 APBA3O96018 575 aa24.29■■□□□ 1.48
SCARNA2-201ENST00000458748 MYOM1P52179 1685 aa24.29■■□□□ 1.48
SCARNA2-201ENST00000458748 ERBB3P21860 1342 aa24.29■■□□□ 1.48
SCARNA2-201ENST00000458748 HSPA5P11021 654 aaKnown RBP24.28■■□□□ 1.48
SCARNA2-201ENST00000458748 CAMKK2Q96RR4 588 aa24.28■■□□□ 1.48
SCARNA2-201ENST00000458748 OVOS2A0A0G2JMS6 1433 aa24.27■■□□□ 1.48
SCARNA2-201ENST00000458748 FYB1O15117 783 aa24.26■■□□□ 1.47
SCARNA2-201ENST00000458748 R3HDM1Q15032 1099 aaKnown RBP24.26■■□□□ 1.47
SCARNA2-201ENST00000458748 IP6K1Q92551 441 aa24.26■■□□□ 1.47
SCARNA2-201ENST00000458748 PEAK1Q9H792 1746 aa24.26■■□□□ 1.47
SCARNA2-201ENST00000458748 KIF20BQ96Q89 1820 aa24.26■■□□□ 1.47
SCARNA2-201ENST00000458748 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
SCARNA2-201ENST00000458748 FAM208AQ9UK61 1670 aaKnown RBP24.24■■□□□ 1.47
SCARNA2-201ENST00000458748 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
SCARNA2-201ENST00000458748 PARD3Q8TEW0 1356 aa24.24■■□□□ 1.47
SCARNA2-201ENST00000458748 NLRP2Q9NX02 1062 aa24.23■■□□□ 1.47
SCARNA2-201ENST00000458748 LRP5O75197 1615 aa24.23■■□□□ 1.47
SCARNA2-201ENST00000458748 SBF2Q86WG5 1849 aa24.22■■□□□ 1.47
SCARNA2-201ENST00000458748 BCL9O00512 1426 aa24.21■■□□□ 1.47
SCARNA2-201ENST00000458748 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
SCARNA2-201ENST00000458748 EXOC5O00471 708 aa24.21■■□□□ 1.47
SCARNA2-201ENST00000458748 GGNBP2Q9H3C7 697 aa24.21■■□□□ 1.47
SCARNA2-201ENST00000458748 AMPHP49418 695 aa24.2■■□□□ 1.46
SCARNA2-201ENST00000458748 CARD14Q9BXL6 1004 aa24.2■■□□□ 1.46
SCARNA2-201ENST00000458748 NSD3Q9BZ95 1437 aa24.19■■□□□ 1.46
SCARNA2-201ENST00000458748 RTL1A6NKG5 1358 aa24.19■■□□□ 1.46
SCARNA2-201ENST00000458748 HOXC9P31274 260 aa24.19■■□□□ 1.46
SCARNA2-201ENST00000458748 CGNL1Q0VF96 1302 aa24.18■■□□□ 1.46
SCARNA2-201ENST00000458748 IL2RBP14784 551 aa24.18■■□□□ 1.46
SCARNA2-201ENST00000458748 MARCH10Q8NA82 808 aaPredicted RBP24.18■■□□□ 1.46
SCARNA2-201ENST00000458748 TNS2Q63HR2 1409 aa24.18■■□□□ 1.46
SCARNA2-201ENST00000458748 KIF24Q5T7B8 1368 aa24.15■■□□□ 1.46
SCARNA2-201ENST00000458748 RREB1Q92766 1687 aa24.15■■□□□ 1.46
SCARNA2-201ENST00000458748 RGPD3A6NKT7 1758 aaPredicted RBP24.14■■□□□ 1.46
SCARNA2-201ENST00000458748 RGPD4Q7Z3J3 1758 aa24.14■■□□□ 1.46
SCARNA2-201ENST00000458748 FBLN1P23142 703 aa24.14■■□□□ 1.45
SCARNA2-201ENST00000458748 BCL11BQ9C0K0 894 aaPredicted RBP24.14■■□□□ 1.45
SCARNA2-201ENST00000458748 LTV1Q96GA3 475 aaPredicted RBP24.13■■□□□ 1.45
SCARNA2-201ENST00000458748 NUP188Q5SRE5 1749 aa24.13■■□□□ 1.45
SCARNA2-201ENST00000458748 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
SCARNA2-201ENST00000458748 SMG6Q86US8 1419 aaKnown RBP24.11■■□□□ 1.45
SCARNA2-201ENST00000458748 PLSCR1O15162 318 aa24.11■■□□□ 1.45
SCARNA2-201ENST00000458748 PTF1AQ7RTS3 328 aa24.11■■□□□ 1.45
SCARNA2-201ENST00000458748 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
SCARNA2-201ENST00000458748 RGPD2P0DJD1 1756 aa24.09■■□□□ 1.45
SCARNA2-201ENST00000458748 INSRP06213 1382 aa24.08■■□□□ 1.45
SCARNA2-201ENST00000458748 FLT4P35916 1363 aa24.08■■□□□ 1.45
SCARNA2-201ENST00000458748 PANK3Q9H999 370 aa24.08■■□□□ 1.45
SCARNA2-201ENST00000458748 ANKRD26Q9UPS8 1709 aa24.07■■□□□ 1.44
SCARNA2-201ENST00000458748 NHSQ6T4R5 1651 aa24.05■■□□□ 1.44
SCARNA2-201ENST00000458748 MAP2P11137 1827 aaKnown RBP24.05■■□□□ 1.44
SCARNA2-201ENST00000458748 NSD2O96028 1365 aa24.04■■□□□ 1.44
SCARNA2-201ENST00000458748 HSP90AB2PQ58FF8 381 aa24.03■■□□□ 1.44
SCARNA2-201ENST00000458748 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
SCARNA2-201ENST00000458748 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
SCARNA2-201ENST00000458748 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
SCARNA2-201ENST00000458748 PPM1GO15355 546 aaPredicted RBP24■■□□□ 1.43
SCARNA2-201ENST00000458748 EMILIN1Q9Y6C2 1016 aa24■■□□□ 1.43
SCARNA2-201ENST00000458748 KIF7Q2M1P5 1343 aa24■■□□□ 1.43
SCARNA2-201ENST00000458748 ZCRB1Q8TBF4 217 aaKnown RBP23.99■■□□□ 1.43
SCARNA2-201ENST00000458748 ANO8Q9HCE9 1232 aaPredicted RBP23.99■■□□□ 1.43
SCARNA2-201ENST00000458748 KAT6BQ8WYB5 2073 aa23.99■■□□□ 1.43
SCARNA2-201ENST00000458748 KCNQ2O43526 872 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms