RNA–Protein interactions for RNA: ENST00000457047.6

CD58-203, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-203ENST00000457047 TNS1Q9HBL0 1735 aaKnown RBP29.38■■■□□ 2.29
CD58-203ENST00000457047 PARP4Q9UKK3 1724 aaKnown RBP29.37■■■□□ 2.29
CD58-203ENST00000457047 CLSPNQ9HAW4 1339 aa29.37■■■□□ 2.29
CD58-203ENST00000457047 THRAP3Q9Y2W1 955 aaKnown RBP29.37■■■□□ 2.29
CD58-203ENST00000457047 TERF2IPQ9NYB0 399 aa29.36■■■□□ 2.29
CD58-203ENST00000457047 TIMELESSQ9UNS1 1208 aa29.34■■■□□ 2.29
CD58-203ENST00000457047 NINLQ9Y2I6 1382 aa29.34■■■□□ 2.29
CD58-203ENST00000457047 WNK3Q9BYP7 1800 aa29.34■■■□□ 2.29
CD58-203ENST00000457047 WDR17Q8IZU2 1322 aa29.32■■■□□ 2.28
CD58-203ENST00000457047 TOM1L2Q6ZVM7 507 aa29.32■■■□□ 2.28
CD58-203ENST00000457047 ABCC6O95255 1503 aa29.32■■■□□ 2.28
CD58-203ENST00000457047 BAG6P46379 1132 aa29.31■■■□□ 2.28
CD58-203ENST00000457047 LRRC37A3O60309 1634 aa29.31■■■□□ 2.28
CD58-203ENST00000457047 OVOS2A0A0J9YW53 1432 aa29.31■■■□□ 2.28
CD58-203ENST00000457047 OVOS2Q6IE36 1432 aa29.31■■■□□ 2.28
CD58-203ENST00000457047 LTN1O94822 1766 aa29.31■■■□□ 2.28
CD58-203ENST00000457047 SLC24A1O60721 1099 aa29.3■■■□□ 2.28
CD58-203ENST00000457047 PDE3BQ13370 1112 aa29.3■■■□□ 2.28
CD58-203ENST00000457047 FAM196AQ6ZSG2 479 aa29.3■■■□□ 2.28
CD58-203ENST00000457047 TMF1P82094 1093 aa29.28■■■□□ 2.28
CD58-203ENST00000457047 DISP2A7MBM2 1401 aa29.27■■■□□ 2.28
CD58-203ENST00000457047 TRIM37O94972 964 aa29.27■■■□□ 2.28
CD58-203ENST00000457047 EN1Q05925 392 aaPredicted RBP29.27■■■□□ 2.28
CD58-203ENST00000457047 ANKRD36BQ8N2N9 1353 aa29.25■■■□□ 2.27
CD58-203ENST00000457047 PEAK1Q9H792 1746 aa29.25■■■□□ 2.27
CD58-203ENST00000457047 CSB-PGBD3P0DP91 1061 aa29.24■■■□□ 2.27
CD58-203ENST00000457047 CARD10Q9BWT7 1032 aa29.21■■■□□ 2.27
CD58-203ENST00000457047 DDB1Q16531 1140 aa29.2■■■□□ 2.26
CD58-203ENST00000457047 MYOM1P52179 1685 aa29.19■■■□□ 2.26
CD58-203ENST00000457047 ERBB3P21860 1342 aa29.19■■■□□ 2.26
CD58-203ENST00000457047 EZH2Q15910 746 aaKnown RBP29.19■■■□□ 2.26
CD58-203ENST00000457047 OVOS2A0A0G2JMS6 1433 aa29.18■■■□□ 2.26
CD58-203ENST00000457047 CCER1Q8TC90 406 aaPredicted RBP29.18■■■□□ 2.26
CD58-203ENST00000457047 APBA3O96018 575 aa29.17■■■□□ 2.26
CD58-203ENST00000457047 CAMKK2Q96RR4 588 aa29.17■■■□□ 2.26
CD58-203ENST00000457047 CCDC7Q96M83 1385 aa29.16■■■□□ 2.26
CD58-203ENST00000457047 CDCA7Q9BWT1 371 aaPredicted RBP29.16■■■□□ 2.26
CD58-203ENST00000457047 SBF2Q86WG5 1849 aa29.16■■■□□ 2.26
CD58-203ENST00000457047 SRCAPQ6ZRS2 3230 aa29.15■■■□□ 2.26
CD58-203ENST00000457047 COG3Q96JB2 828 aa29.15■■■□□ 2.26
CD58-203ENST00000457047 CDCA8Q53HL2 280 aa29.14■■■□□ 2.25
CD58-203ENST00000457047 RREB1Q92766 1687 aa29.13■■■□□ 2.25
CD58-203ENST00000457047 ANKRD24Q8TF21 1146 aa29.13■■■□□ 2.25
CD58-203ENST00000457047 PSDA5PKW4 1024 aaPredicted RBP29.12■■■□□ 2.25
CD58-203ENST00000457047 FBLN1P23142 703 aa29.12■■■□□ 2.25
CD58-203ENST00000457047 MARCH10Q8NA82 808 aaPredicted RBP29.12■■■□□ 2.25
CD58-203ENST00000457047 NLRP2Q9NX02 1062 aa29.11■■■□□ 2.25
CD58-203ENST00000457047 KIF20BQ96Q89 1820 aa29.1■■■□□ 2.25
CD58-203ENST00000457047 FYB1O15117 783 aa29.1■■■□□ 2.25
CD58-203ENST00000457047 IP6K1Q92551 441 aa29.1■■■□□ 2.25
CD58-203ENST00000457047 MAP3K19Q56UN5 1328 aa29.09■■■□□ 2.25
CD58-203ENST00000457047 NUP188Q5SRE5 1749 aa29.09■■■□□ 2.25
CD58-203ENST00000457047 C11orf95C9JLR9 678 aaPredicted RBP29.09■■■□□ 2.25
CD58-203ENST00000457047 GGNBP2Q9H3C7 697 aa29.09■■■□□ 2.25
CD58-203ENST00000457047 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
CD58-203ENST00000457047 TNS2Q63HR2 1409 aa29.08■■■□□ 2.25
CD58-203ENST00000457047 FAM208AQ9UK61 1670 aaKnown RBP29.06■■■□□ 2.24
CD58-203ENST00000457047 PTF1AQ7RTS3 328 aa29.06■■■□□ 2.24
CD58-203ENST00000457047 BCL9O00512 1426 aa29.06■■■□□ 2.24
CD58-203ENST00000457047 EXOC5O00471 708 aa29.05■■■□□ 2.24
CD58-203ENST00000457047 CARD14Q9BXL6 1004 aa29.05■■■□□ 2.24
CD58-203ENST00000457047 HOXC9P31274 260 aa29.04■■■□□ 2.24
CD58-203ENST00000457047 LTV1Q96GA3 475 aaPredicted RBP29.04■■■□□ 2.24
CD58-203ENST00000457047 R3HDM1Q15032 1099 aaKnown RBP29.03■■■□□ 2.24
CD58-203ENST00000457047 NSD3Q9BZ95 1437 aa29.02■■■□□ 2.24
CD58-203ENST00000457047 IL2RBP14784 551 aa29.02■■■□□ 2.24
CD58-203ENST00000457047 RGPD3A6NKT7 1758 aaPredicted RBP29.02■■■□□ 2.24
CD58-203ENST00000457047 RGPD2P0DJD1 1756 aa29.02■■■□□ 2.24
CD58-203ENST00000457047 RGPD4Q7Z3J3 1758 aa29.02■■■□□ 2.24
CD58-203ENST00000457047 LRP5O75197 1615 aa29.01■■■□□ 2.24
CD58-203ENST00000457047 AMPHP49418 695 aa29.01■■■□□ 2.23
CD58-203ENST00000457047 RRS1Q15050 365 aaKnown RBP29.01■■■□□ 2.23
CD58-203ENST00000457047 BCL11BQ9C0K0 894 aaPredicted RBP29■■■□□ 2.23
CD58-203ENST00000457047 HSPA5P11021 654 aaKnown RBP28.99■■■□□ 2.23
CD58-203ENST00000457047 RTL1A6NKG5 1358 aa28.99■■■□□ 2.23
CD58-203ENST00000457047 EIF4G2P78344 907 aaKnown RBP eCLIP28.97■■■□□ 2.23
CD58-203ENST00000457047 NHSQ6T4R5 1651 aa28.95■■■□□ 2.23
CD58-203ENST00000457047 PLSCR1O15162 318 aa28.94■■■□□ 2.22
CD58-203ENST00000457047 POLR3GLQ9BT43 218 aa28.94■■■□□ 2.22
CD58-203ENST00000457047 KCNQ2O43526 872 aa28.92■■■□□ 2.22
CD58-203ENST00000457047 ACSBG1Q96GR2 724 aa28.9■■■□□ 2.22
CD58-203ENST00000457047 SHANK3Q9BYB0 1731 aa28.89■■■□□ 2.22
CD58-203ENST00000457047 MEGF6O75095 1541 aa28.89■■■□□ 2.22
CD58-203ENST00000457047 PROM2Q8N271 834 aa28.89■■■□□ 2.21
CD58-203ENST00000457047 HSP90AB2PQ58FF8 381 aa28.88■■■□□ 2.21
CD58-203ENST00000457047 NBPF14Q5TI25 921 aa28.88■■■□□ 2.21
CD58-203ENST00000457047 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
CD58-203ENST00000457047 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
CD58-203ENST00000457047 FLT4P35916 1363 aa28.87■■■□□ 2.21
CD58-203ENST00000457047 INSRP06213 1382 aa28.87■■■□□ 2.21
CD58-203ENST00000457047 ANKRD26Q9UPS8 1709 aa28.86■■■□□ 2.21
CD58-203ENST00000457047 EMILIN1Q9Y6C2 1016 aa28.86■■■□□ 2.21
CD58-203ENST00000457047 KIF24Q5T7B8 1368 aa28.86■■■□□ 2.21
CD58-203ENST00000457047 CGNL1Q0VF96 1302 aa28.85■■■□□ 2.21
CD58-203ENST00000457047 SMG6Q86US8 1419 aaKnown RBP28.85■■■□□ 2.21
CD58-203ENST00000457047 USHBP1Q8N6Y0 703 aa28.85■■■□□ 2.21
CD58-203ENST00000457047 BTAF1O14981 1849 aa28.84■■■□□ 2.21
CD58-203ENST00000457047 DDX54Q8TDD1 881 aaKnown RBP28.84■■■□□ 2.21
CD58-203ENST00000457047 ANO8Q9HCE9 1232 aaPredicted RBP28.84■■■□□ 2.21
CD58-203ENST00000457047 TXNRD1Q16881 649 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms