RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 IGF1RP08069 1367 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 ZNF500O60304 480 aaPredicted RBP5.92□□□□□ -1.46
PCDH9-203ENST00000456367 ADCY5O95622 1261 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 SFPQP23246 707 aaKnown RBP eCLIP5.92□□□□□ -1.46
PCDH9-203ENST00000456367 RPAP2Q8IXW5 612 aaPredicted RBP5.92□□□□□ -1.46
PCDH9-203ENST00000456367 PSMD1Q99460 953 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 LRRCC1Q9C099 1032 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 CPLX1O14810 134 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 POLR3GO15318 223 aaPredicted RBP5.91□□□□□ -1.46
PCDH9-203ENST00000456367 ZNF526Q8TF50 670 aaPredicted RBP5.91□□□□□ -1.46
PCDH9-203ENST00000456367 IFIT2P09913 472 aaKnown RBP5.91□□□□□ -1.46
PCDH9-203ENST00000456367 CEP135Q66GS9 1140 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 RASSF8Q8NHQ8 419 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 DNAAF4Q8WXU2 420 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 CYP46A1Q9Y6A2 500 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 NAIPQ13075 1403 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 SPDYE4A6NLX3 237 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 PDILTQ8N807 584 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 PPP1R9BQ96SB3 815 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 RBM28Q9NW13 759 aaKnown RBP5.91□□□□□ -1.46
PCDH9-203ENST00000456367 ANO10Q9NW15 660 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 ANKRD50Q9ULJ7 1429 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 NPHP1O15259 732 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 ZNF445P59923 1031 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 DMTNQ08495 405 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 CCDC102AQ96A19 550 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 USP25Q9UHP3 1055 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 ABCC11Q96J66 1382 aa5.91□□□□□ -1.46
PCDH9-203ENST00000456367 DHX16O60231 1041 aaKnown RBP5.9□□□□□ -1.46
PCDH9-203ENST00000456367 UBE2HP62256 183 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 SAFBQ15424 915 aaKnown RBP eCLIP5.9□□□□□ -1.46
PCDH9-203ENST00000456367 CRACR2AQ9BSW2 395 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 SH2B1Q9NRF2 756 aaPredicted RBP5.9□□□□□ -1.46
PCDH9-203ENST00000456367 ATAD2Q6PL18 1390 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 DUSP27Q5VZP5 1158 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 PPFIBP1Q86W92 1011 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 CCDC150Q8NCX0 1101 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 SPATA32Q96LK8 384 aa5.9□□□□□ -1.46
PCDH9-203ENST00000456367 UPF3BQ9BZI7 483 aaKnown RBP5.9□□□□□ -1.46
PCDH9-203ENST00000456367 A0A1B0GUL7 405 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 CLSTN1O94985 981 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 SERPINC1P01008 464 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 AKAP17AQ02040 695 aaKnown RBP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 ALDH1L2Q3SY69 923 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 CCDC83Q8IWF9 413 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 CLIP2Q9UDT6 1046 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 ERLIN2O94905 339 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 SLU7O95391 586 aaKnown RBP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 EXOSC9Q06265 439 aaKnown RBP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 TTC31Q49AM3 519 aaPredicted RBP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 LUZP1Q86V48 1076 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 LUC7LQ9NQ29 371 aaKnown RBP5.9□□□□□ -1.47
PCDH9-203ENST00000456367 ERBINQ96RT1 1412 aa5.9□□□□□ -1.47
PCDH9-203ENST00000456367 CCDC27Q2M243 656 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 CCDC148Q8NFR7 591 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 IPO4Q8TEX9 1081 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 AQRO60306 1485 aaKnown RBP eCLIP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 SSR1P43307 286 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 RARSP54136 660 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 LARP1BQ659C4 914 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 GPATCH11Q8N954 259 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 NOB1Q9ULX3 412 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 PIBF1Q8WXW3 757 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 ZNHIT6Q9NWK9 470 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 FGD5Q6ZNL6 1462 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 SNW1Q13573 536 aaKnown RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 C16orf45Q96MC5 204 aaPredicted RBP5.89□□□□□ -1.47
PCDH9-203ENST00000456367 ARFGAP3Q9NP61 516 aa5.89□□□□□ -1.47
PCDH9-203ENST00000456367 CASQ1P31415 396 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 MNAT1P51948 309 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 KRT32Q14532 448 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 KIAA1328Q86T90 577 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 ERC1Q8IUD2 1116 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 WWC1Q8IX03 1113 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 PCMTD1Q96MG8 357 aaPredicted RBP5.88□□□□□ -1.47
PCDH9-203ENST00000456367 MAPKBP1O60336 1514 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 ATAD2BQ9ULI0 1458 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 GOLGA6L10A0A0M3HER8 536 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 FSD2A1L4K1 749 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 CCT4P50991 539 aaKnown RBP5.88□□□□□ -1.47
PCDH9-203ENST00000456367 STK38Q15208 465 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 C20orf194Q5TEA3 1177 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 ERO1AQ96HE7 468 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
PCDH9-203ENST00000456367 MX1P20591 662 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 TRDNQ13061 729 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 SMARCC1Q92922 1105 aaPredicted RBP5.88□□□□□ -1.47
PCDH9-203ENST00000456367 ANKRD30BQ9BXX2 1392 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 PATL2C9JE40 543 aaKnown RBP5.88□□□□□ -1.47
PCDH9-203ENST00000456367 KIF5CO60282 957 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 NF2P35240 595 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 LMAN1P49257 510 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 FAM200AQ8TCP9 573 aa5.88□□□□□ -1.47
PCDH9-203ENST00000456367 RPRD2Q5VT52 1461 aaKnown RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 A6NNZ2 444 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 G3BP1Q13283 466 aaKnown RBP eCLIP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 TUBB8Q3ZCM7 444 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms